data_8CZJ # _model_server_result.job_id YReyUnUahFDPCE686rOcGQ _model_server_result.datetime_utc '2024-11-15 12:39:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8czj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 8CZJ # _exptl.entry_id 8CZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.16 _cell.angle_gamma 90 _cell.entry_id 8CZJ _cell.length_a 62.985 _cell.length_b 117.661 _cell.length_c 64.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 I N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id MPG _chem_comp.mon_nstd_flag . _chem_comp.name '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 MPG sing 200 n n C2 C1 MPG sing 201 n n C3 C4 MPG sing 202 n n C4 C5 MPG sing 203 n n C5 C6 MPG sing 204 n n C6 C7 MPG sing 205 n n C7 C8 MPG sing 206 n n C8 C9 MPG sing 207 n n C9 C10 MPG doub 208 z n C10 C11 MPG sing 209 n n C11 C12 MPG sing 210 n n C12 C13 MPG sing 211 n n C13 C14 MPG sing 212 n n C14 C15 MPG sing 213 n n C15 C16 MPG sing 214 n n C16 C17 MPG sing 215 n n C17 C18 MPG sing 216 n n O1 C1 MPG sing 217 n n O1 CX3 MPG sing 218 n n CXD O2 MPG sing 219 n n CXD C21 MPG sing 220 n n CXD CX3 MPG sing 221 n n C21 O3 MPG sing 222 n n C2 H21C MPG sing 223 n n C2 H22C MPG sing 224 n n C3 H31C MPG sing 225 n n C3 H32C MPG sing 226 n n CX3 O4 MPG doub 227 n n C4 H41C MPG sing 228 n n C4 H42C MPG sing 229 n n C5 H51C MPG sing 230 n n C5 H52C MPG sing 231 n n C6 H61C MPG sing 232 n n C6 H62C MPG sing 233 n n C7 H71C MPG sing 234 n n C7 H72C MPG sing 235 n n C8 H81C MPG sing 236 n n C8 H82C MPG sing 237 n n C9 H9 MPG sing 238 n n C10 H10 MPG sing 239 n n C11 H111 MPG sing 240 n n C11 H112 MPG sing 241 n n C12 H121 MPG sing 242 n n C12 H122 MPG sing 243 n n C13 H131 MPG sing 244 n n C13 H132 MPG sing 245 n n C14 H141 MPG sing 246 n n C14 H142 MPG sing 247 n n C15 H151 MPG sing 248 n n C15 H152 MPG sing 249 n n C16 H161 MPG sing 250 n n C16 H162 MPG sing 251 n n C17 H171 MPG sing 252 n n C17 H172 MPG sing 253 n n C18 H181 MPG sing 254 n n C18 H182 MPG sing 255 n n C18 H183 MPG sing 256 n n C1 HX31 MPG sing 257 n n C1 HX32 MPG sing 258 n n CXD HXD MPG sing 259 n n O2 H2 MPG sing 260 n n C21 H211 MPG sing 261 n n C21 H212 MPG sing 262 n n O3 H3 MPG sing 263 n n # _atom_sites.entry_id 8CZJ _atom_sites.fract_transf_matrix[1][1] 0.015877 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004005 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008499 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 401 401 SO4 SO4 . D 2 SO4 A 1 402 402 SO4 SO4 . E 2 SO4 A 1 403 403 SO4 SO4 . F 3 MPG A 1 404 501 MPG MPG . G 3 MPG A 1 405 502 MPG MPG . H 2 SO4 A 1 406 402 SO4 SO4 . I 3 MPG A 1 407 501 MPG MPG . J 2 SO4 B 1 401 401 SO4 SO4 . K 2 SO4 B 1 402 403 SO4 SO4 . L 2 SO4 B 1 403 404 SO4 SO4 . M 2 SO4 B 1 404 405 SO4 SO4 . N 3 MPG B 1 405 502 MPG MPG . O 3 MPG B 1 406 503 MPG MPG . P 3 MPG B 1 407 504 MPG MPG . Q 3 MPG B 1 408 505 MPG MPG . R 3 MPG B 1 409 506 MPG MPG . S 3 MPG B 1 410 507 MPG MPG . T 4 HOH A 1 601 601 HOH HOH . T 4 HOH A 2 602 603 HOH HOH . T 4 HOH A 3 603 602 HOH HOH . U 4 HOH B 1 501 603 HOH HOH . U 4 HOH B 2 502 602 HOH HOH . U 4 HOH B 3 503 601 HOH HOH . U 4 HOH B 4 504 604 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 MPG . . . F 3 52.438 14.204 108.725 1 70.08 ? C2 MPG 404 A 1 HETATM 2 C C3 MPG . . . F 3 52.556 12.95 109.609 1 69.62 ? C3 MPG 404 A 1 HETATM 3 C C4 MPG . . . F 3 51.461 12.827 110.676 1 65.33 ? C4 MPG 404 A 1 HETATM 4 C C5 MPG . . . F 3 51.658 11.531 111.477 1 66.75 ? C5 MPG 404 A 1 HETATM 5 C C6 MPG . . . F 3 50.365 11.027 112.136 1 56.11 ? C6 MPG 404 A 1 HETATM 6 C C7 MPG . . . F 3 50.529 9.566 112.595 1 64.67 ? C7 MPG 404 A 1 HETATM 7 C C8 MPG . . . F 3 50.104 9.431 114.062 1 74.78 ? C8 MPG 404 A 1 HETATM 8 C C9 MPG . . . F 3 50.456 8.07 114.666 1 60.41 ? C9 MPG 404 A 1 HETATM 9 C C10 MPG . . . F 3 49.5 7.291 115.146 1 71.39 ? C10 MPG 404 A 1 HETATM 10 C C11 MPG . . . F 3 48.025 7.717 115.106 1 66.48 ? C11 MPG 404 A 1 HETATM 11 C C12 MPG . . . F 3 47.147 6.781 115.944 1 48.45 ? C12 MPG 404 A 1 HETATM 12 C C13 MPG . . . F 3 46.52 5.702 115.068 1 43.03 ? C13 MPG 404 A 1 HETATM 13 C C14 MPG . . . F 3 47.427 4.473 115.044 1 45.68 ? C14 MPG 404 A 1 HETATM 14 C C15 MPG . . . F 3 46.623 3.349 114.405 1 48.86 ? C15 MPG 404 A 1 HETATM 15 C C16 MPG . . . F 3 47.41 2.044 114.24 1 50.94 ? C16 MPG 404 A 1 HETATM 16 C C17 MPG . . . F 3 48.919 2.251 114.162 1 54.36 ? C17 MPG 404 A 1 HETATM 17 C C18 MPG . . . F 3 49.559 1.114 113.366 1 44.55 ? C18 MPG 404 A 1 HETATM 18 O O1 MPG . . . F 3 53.982 15.47 107.31 1 84.84 ? O1 MPG 404 A 1 HETATM 19 C C1 MPG . . . F 3 53.805 14.887 108.577 1 71.03 ? C1 MPG 404 A 1 HETATM 20 C CXD MPG . . . F 3 55.275 17.328 106.071 1 85.63 ? CXD MPG 404 A 1 HETATM 21 O O2 MPG . . . F 3 55.056 18.713 106.076 1 94.29 ? O2 MPG 404 A 1 HETATM 22 C C21 MPG . . . F 3 54.671 16.777 104.778 1 67.61 ? C21 MPG 404 A 1 HETATM 23 O O3 MPG . . . F 3 55.134 17.53 103.69 1 63.34 ? O3 MPG 404 A 1 HETATM 24 O O4 MPG . . . F 3 54.762 17.267 108.384 1 81.57 ? O4 MPG 404 A 1 HETATM 25 C CX3 MPG . . . F 3 54.662 16.7 107.34 1 91.01 ? CX3 MPG 404 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #