data_8CZJ # _model_server_result.job_id 4oe82igIVwxQU8PXEwoIbg _model_server_result.datetime_utc '2024-11-15 12:45:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8czj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":406}' # _entry.id 8CZJ # _exptl.entry_id 8CZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.16 _cell.angle_gamma 90 _cell.entry_id 8CZJ _cell.length_a 62.985 _cell.length_b 117.661 _cell.length_c 64.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 I N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id MPG _chem_comp.mon_nstd_flag . _chem_comp.name '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 MPG sing 200 n n C2 C1 MPG sing 201 n n C3 C4 MPG sing 202 n n C4 C5 MPG sing 203 n n C5 C6 MPG sing 204 n n C6 C7 MPG sing 205 n n C7 C8 MPG sing 206 n n C8 C9 MPG sing 207 n n C9 C10 MPG doub 208 z n C10 C11 MPG sing 209 n n C11 C12 MPG sing 210 n n C12 C13 MPG sing 211 n n C13 C14 MPG sing 212 n n C14 C15 MPG sing 213 n n C15 C16 MPG sing 214 n n C16 C17 MPG sing 215 n n C17 C18 MPG sing 216 n n O1 C1 MPG sing 217 n n O1 CX3 MPG sing 218 n n CXD O2 MPG sing 219 n n CXD C21 MPG sing 220 n n CXD CX3 MPG sing 221 n n C21 O3 MPG sing 222 n n C2 H21C MPG sing 223 n n C2 H22C MPG sing 224 n n C3 H31C MPG sing 225 n n C3 H32C MPG sing 226 n n CX3 O4 MPG doub 227 n n C4 H41C MPG sing 228 n n C4 H42C MPG sing 229 n n C5 H51C MPG sing 230 n n C5 H52C MPG sing 231 n n C6 H61C MPG sing 232 n n C6 H62C MPG sing 233 n n C7 H71C MPG sing 234 n n C7 H72C MPG sing 235 n n C8 H81C MPG sing 236 n n C8 H82C MPG sing 237 n n C9 H9 MPG sing 238 n n C10 H10 MPG sing 239 n n C11 H111 MPG sing 240 n n C11 H112 MPG sing 241 n n C12 H121 MPG sing 242 n n C12 H122 MPG sing 243 n n C13 H131 MPG sing 244 n n C13 H132 MPG sing 245 n n C14 H141 MPG sing 246 n n C14 H142 MPG sing 247 n n C15 H151 MPG sing 248 n n C15 H152 MPG sing 249 n n C16 H161 MPG sing 250 n n C16 H162 MPG sing 251 n n C17 H171 MPG sing 252 n n C17 H172 MPG sing 253 n n C18 H181 MPG sing 254 n n C18 H182 MPG sing 255 n n C18 H183 MPG sing 256 n n C1 HX31 MPG sing 257 n n C1 HX32 MPG sing 258 n n CXD HXD MPG sing 259 n n O2 H2 MPG sing 260 n n C21 H211 MPG sing 261 n n C21 H212 MPG sing 262 n n O3 H3 MPG sing 263 n n # _atom_sites.entry_id 8CZJ _atom_sites.fract_transf_matrix[1][1] 0.015877 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004005 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008499 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 401 401 SO4 SO4 . D 2 SO4 A 1 402 402 SO4 SO4 . E 2 SO4 A 1 403 403 SO4 SO4 . F 3 MPG A 1 404 501 MPG MPG . G 3 MPG A 1 405 502 MPG MPG . H 2 SO4 A 1 406 402 SO4 SO4 . I 3 MPG A 1 407 501 MPG MPG . J 2 SO4 B 1 401 401 SO4 SO4 . K 2 SO4 B 1 402 403 SO4 SO4 . L 2 SO4 B 1 403 404 SO4 SO4 . M 2 SO4 B 1 404 405 SO4 SO4 . N 3 MPG B 1 405 502 MPG MPG . O 3 MPG B 1 406 503 MPG MPG . P 3 MPG B 1 407 504 MPG MPG . Q 3 MPG B 1 408 505 MPG MPG . R 3 MPG B 1 409 506 MPG MPG . S 3 MPG B 1 410 507 MPG MPG . T 4 HOH A 1 601 601 HOH HOH . T 4 HOH A 2 602 603 HOH HOH . T 4 HOH A 3 603 602 HOH HOH . U 4 HOH B 1 501 603 HOH HOH . U 4 HOH B 2 502 602 HOH HOH . U 4 HOH B 3 503 601 HOH HOH . U 4 HOH B 4 504 604 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 MPG . . . O 3 39.08 -4.256 153.812 1 57.98 ? C2 MPG 406 B 1 HETATM 2 C C3 MPG . . . O 3 39.196 -4.37 152.284 1 72.3 ? C3 MPG 406 B 1 HETATM 3 C C4 MPG . . . O 3 39.266 -2.993 151.608 1 62.07 ? C4 MPG 406 B 1 HETATM 4 C C5 MPG . . . O 3 39.675 -3.075 150.133 1 45.52 ? C5 MPG 406 B 1 HETATM 5 C C6 MPG . . . O 3 39.33 -1.781 149.374 1 41.91 ? C6 MPG 406 B 1 HETATM 6 C C7 MPG . . . O 3 38.92 -2.141 147.938 1 37.6 ? C7 MPG 406 B 1 HETATM 7 C C8 MPG . . . O 3 38.629 -0.923 147.046 1 38.67 ? C8 MPG 406 B 1 HETATM 8 C C9 MPG . . . O 3 38.484 -1.393 145.591 1 43.67 ? C9 MPG 406 B 1 HETATM 9 C C10 MPG . . . O 3 38.56 -0.673 144.473 1 37.63 ? C10 MPG 406 B 1 HETATM 10 C C11 MPG . . . O 3 38.806 0.829 144.358 1 37.53 ? C11 MPG 406 B 1 HETATM 11 C C12 MPG . . . O 3 38.282 1.424 143.027 1 50.14 ? C12 MPG 406 B 1 HETATM 12 C C13 MPG . . . O 3 37.175 0.615 142.32 1 63.2 ? C13 MPG 406 B 1 HETATM 13 C C14 MPG . . . O 3 35.977 1.467 141.862 1 42.06 ? C14 MPG 406 B 1 HETATM 14 C C15 MPG . . . O 3 36.454 2.639 141.011 1 41.43 ? C15 MPG 406 B 1 HETATM 15 C C16 MPG . . . O 3 35.342 3.659 140.779 1 41.28 ? C16 MPG 406 B 1 HETATM 16 C C17 MPG . . . O 3 36.029 4.992 140.519 1 49.49 ? C17 MPG 406 B 1 HETATM 17 C C18 MPG . . . O 3 35.324 5.765 139.41 1 49.57 ? C18 MPG 406 B 1 HETATM 18 O O1 MPG . . . O 3 36.885 -5.2 153.524 1 76.72 ? O1 MPG 406 B 1 HETATM 19 C C1 MPG . . . O 3 37.627 -4.3 154.301 1 57.06 ? C1 MPG 406 B 1 HETATM 20 C CXD MPG . . . O 3 34.605 -6.244 153.105 1 70.48 ? CXD MPG 406 B 1 HETATM 21 O O2 MPG . . . O 3 33.377 -5.564 153.065 1 70.3 ? O2 MPG 406 B 1 HETATM 22 C C21 MPG . . . O 3 34.39 -7.667 153.615 1 67.37 ? C21 MPG 406 B 1 HETATM 23 O O3 MPG . . . O 3 33.151 -7.734 154.26 1 69.01 ? O3 MPG 406 B 1 HETATM 24 O O4 MPG . . . O 3 35.297 -5.253 155.136 1 79.3 ? O4 MPG 406 B 1 HETATM 25 C CX3 MPG . . . O 3 35.604 -5.525 154.018 1 81.24 ? CX3 MPG 406 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #