data_8CZM # _model_server_result.job_id T-G2ct2MDmPHpU1PEJltUw _model_server_result.datetime_utc '2025-01-25 07:36:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8czm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":203}' # _entry.id 8CZM # _exptl.entry_id 8CZM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 125.676 _cell.angle_gamma 90 _cell.entry_id 8CZM _cell.length_a 116.956 _cell.length_b 64.9 _cell.length_c 75.009 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8CZM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 30 1_555 A SG CYS 33 A CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? disulf ? disulf2 B SG CYS 30 B CYS 30 1_555 B SG CYS 33 B CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 246 n n C1 C2 PGE sing 247 n n C1 H1 PGE sing 248 n n C1 H12 PGE sing 249 n n O1 HO1 PGE sing 250 n n C2 O2 PGE sing 251 n n C2 H2 PGE sing 252 n n C2 H22 PGE sing 253 n n O2 C3 PGE sing 254 n n C3 C4 PGE sing 255 n n C3 H3 PGE sing 256 n n C3 H32 PGE sing 257 n n C4 O3 PGE sing 258 n n C4 H4 PGE sing 259 n n C4 H42 PGE sing 260 n n O4 C6 PGE sing 261 n n O4 HO4 PGE sing 262 n n C6 C5 PGE sing 263 n n C6 H6 PGE sing 264 n n C6 H62 PGE sing 265 n n C5 O3 PGE sing 266 n n C5 H5 PGE sing 267 n n C5 H52 PGE sing 268 n n # _atom_sites.entry_id 8CZM _atom_sites.fract_transf_matrix[1][1] 0.00855 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006139 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015408 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BYZ A 1 201 502 BYZ B5 . D 2 BYZ A 1 202 503 BYZ B5 . E 2 BYZ A 1 203 504 BYZ B5 . F 2 BYZ A 1 204 505 BYZ B5 . G 2 BYZ B 1 201 402 BYZ B5 . H 2 BYZ B 1 202 403 BYZ B5 . I 3 PGE B 1 203 404 PGE PG4 . J 4 HOH A 1 301 64 HOH HOH . J 4 HOH A 2 302 47 HOH HOH . J 4 HOH A 3 303 172 HOH HOH . J 4 HOH A 4 304 35 HOH HOH . J 4 HOH A 5 305 197 HOH HOH . J 4 HOH A 6 306 415 HOH HOH . J 4 HOH A 7 307 16 HOH HOH . J 4 HOH A 8 308 227 HOH HOH . J 4 HOH A 9 309 289 HOH HOH . J 4 HOH A 10 310 150 HOH HOH . J 4 HOH A 11 311 332 HOH HOH . J 4 HOH A 12 312 113 HOH HOH . J 4 HOH A 13 313 173 HOH HOH . J 4 HOH A 14 314 124 HOH HOH . J 4 HOH A 15 315 44 HOH HOH . J 4 HOH A 16 316 68 HOH HOH . J 4 HOH A 17 317 75 HOH HOH . J 4 HOH A 18 318 231 HOH HOH . J 4 HOH A 19 319 31 HOH HOH . J 4 HOH A 20 320 77 HOH HOH . J 4 HOH A 21 321 294 HOH HOH . J 4 HOH A 22 322 189 HOH HOH . J 4 HOH A 23 323 12 HOH HOH . J 4 HOH A 24 324 153 HOH HOH . J 4 HOH A 25 325 53 HOH HOH . J 4 HOH A 26 326 42 HOH HOH . J 4 HOH A 27 327 1 HOH HOH . J 4 HOH A 28 328 100 HOH HOH . J 4 HOH A 29 329 43 HOH HOH . J 4 HOH A 30 330 40 HOH HOH . J 4 HOH A 31 331 117 HOH HOH . J 4 HOH A 32 332 110 HOH HOH . J 4 HOH A 33 333 3 HOH HOH . J 4 HOH A 34 334 37 HOH HOH . J 4 HOH A 35 335 9 HOH HOH . J 4 HOH A 36 336 224 HOH HOH . J 4 HOH A 37 337 193 HOH HOH . J 4 HOH A 38 338 8 HOH HOH . J 4 HOH A 39 339 20 HOH HOH . J 4 HOH A 40 340 66 HOH HOH . J 4 HOH A 41 341 4 HOH HOH . J 4 HOH A 42 342 412 HOH HOH . J 4 HOH A 43 343 23 HOH HOH . J 4 HOH A 44 344 21 HOH HOH . J 4 HOH A 45 345 25 HOH HOH . J 4 HOH A 46 346 379 HOH HOH . J 4 HOH A 47 347 50 HOH HOH . J 4 HOH A 48 348 302 HOH HOH . J 4 HOH A 49 349 107 HOH HOH . J 4 HOH A 50 350 81 HOH HOH . J 4 HOH A 51 351 73 HOH HOH . J 4 HOH A 52 352 98 HOH HOH . J 4 HOH A 53 353 203 HOH HOH . J 4 HOH A 54 354 33 HOH HOH . J 4 HOH A 55 355 84 HOH HOH . J 4 HOH A 56 356 14 HOH HOH . J 4 HOH A 57 357 258 HOH HOH . J 4 HOH A 58 358 127 HOH HOH . J 4 HOH A 59 359 45 HOH HOH . J 4 HOH A 60 360 28 HOH HOH . J 4 HOH A 61 361 102 HOH HOH . J 4 HOH A 62 362 205 HOH HOH . J 4 HOH A 63 363 99 HOH HOH . J 4 HOH A 64 364 335 HOH HOH . J 4 HOH A 65 365 106 HOH HOH . J 4 HOH A 66 366 232 HOH HOH . J 4 HOH A 67 367 170 HOH HOH . J 4 HOH A 68 368 225 HOH HOH . J 4 HOH A 69 369 184 HOH HOH . J 4 HOH A 70 370 123 HOH HOH . J 4 HOH A 71 371 13 HOH HOH . J 4 HOH A 72 372 65 HOH HOH . J 4 HOH A 73 373 34 HOH HOH . J 4 HOH A 74 374 242 HOH HOH . J 4 HOH A 75 375 79 HOH HOH . J 4 HOH A 76 376 67 HOH HOH . J 4 HOH A 77 377 158 HOH HOH . J 4 HOH A 78 378 162 HOH HOH . J 4 HOH A 79 379 90 HOH HOH . J 4 HOH A 80 380 62 HOH HOH . J 4 HOH A 81 381 91 HOH HOH . J 4 HOH A 82 382 236 HOH HOH . J 4 HOH A 83 383 136 HOH HOH . J 4 HOH A 84 384 167 HOH HOH . J 4 HOH A 85 385 257 HOH HOH . J 4 HOH A 86 386 55 HOH HOH . J 4 HOH A 87 387 378 HOH HOH . J 4 HOH A 88 388 7 HOH HOH . J 4 HOH A 89 389 274 HOH HOH . J 4 HOH A 90 390 61 HOH HOH . J 4 HOH A 91 391 30 HOH HOH . J 4 HOH A 92 392 126 HOH HOH . J 4 HOH A 93 393 436 HOH HOH . J 4 HOH A 94 394 83 HOH HOH . J 4 HOH A 95 395 169 HOH HOH . J 4 HOH A 96 396 26 HOH HOH . J 4 HOH A 97 397 18 HOH HOH . J 4 HOH A 98 398 176 HOH HOH . J 4 HOH A 99 399 52 HOH HOH . J 4 HOH A 100 400 38 HOH HOH . J 4 HOH A 101 401 354 HOH HOH . J 4 HOH A 102 402 187 HOH HOH . J 4 HOH A 103 403 22 HOH HOH . J 4 HOH A 104 404 57 HOH HOH . J 4 HOH A 105 405 306 HOH HOH . J 4 HOH A 106 406 380 HOH HOH . J 4 HOH A 107 407 82 HOH HOH . J 4 HOH A 108 408 268 HOH HOH . J 4 HOH A 109 409 287 HOH HOH . J 4 HOH A 110 410 60 HOH HOH . J 4 HOH A 111 411 423 HOH HOH . J 4 HOH A 112 412 24 HOH HOH . J 4 HOH A 113 413 198 HOH HOH . J 4 HOH A 114 414 139 HOH HOH . J 4 HOH A 115 415 29 HOH HOH . J 4 HOH A 116 416 101 HOH HOH . J 4 HOH A 117 417 104 HOH HOH . J 4 HOH A 118 418 219 HOH HOH . J 4 HOH A 119 419 111 HOH HOH . J 4 HOH A 120 420 228 HOH HOH . J 4 HOH A 121 421 145 HOH HOH . J 4 HOH A 122 422 384 HOH HOH . J 4 HOH A 123 423 311 HOH HOH . J 4 HOH A 124 424 190 HOH HOH . J 4 HOH A 125 425 164 HOH HOH . J 4 HOH A 126 426 440 HOH HOH . J 4 HOH A 127 427 120 HOH HOH . J 4 HOH A 128 428 209 HOH HOH . J 4 HOH A 129 429 133 HOH HOH . J 4 HOH A 130 430 206 HOH HOH . J 4 HOH A 131 431 409 HOH HOH . J 4 HOH A 132 432 442 HOH HOH . J 4 HOH A 133 433 439 HOH HOH . J 4 HOH A 134 434 159 HOH HOH . J 4 HOH A 135 435 437 HOH HOH . J 4 HOH A 136 436 443 HOH HOH . J 4 HOH A 137 437 447 HOH HOH . J 4 HOH A 138 438 438 HOH HOH . J 4 HOH A 139 439 444 HOH HOH . J 4 HOH A 140 440 185 HOH HOH . J 4 HOH A 141 441 445 HOH HOH . K 4 HOH B 1 301 63 HOH HOH . K 4 HOH B 2 302 333 HOH HOH . K 4 HOH B 3 303 96 HOH HOH . K 4 HOH B 4 304 19 HOH HOH . K 4 HOH B 5 305 337 HOH HOH . K 4 HOH B 6 306 89 HOH HOH . K 4 HOH B 7 307 160 HOH HOH . K 4 HOH B 8 308 149 HOH HOH . K 4 HOH B 9 309 80 HOH HOH . K 4 HOH B 10 310 11 HOH HOH . K 4 HOH B 11 311 71 HOH HOH . K 4 HOH B 12 312 108 HOH HOH . K 4 HOH B 13 313 183 HOH HOH . K 4 HOH B 14 314 163 HOH HOH . K 4 HOH B 15 315 85 HOH HOH . K 4 HOH B 16 316 119 HOH HOH . K 4 HOH B 17 317 118 HOH HOH . K 4 HOH B 18 318 140 HOH HOH . K 4 HOH B 19 319 27 HOH HOH . K 4 HOH B 20 320 204 HOH HOH . K 4 HOH B 21 321 251 HOH HOH . K 4 HOH B 22 322 143 HOH HOH . K 4 HOH B 23 323 78 HOH HOH . K 4 HOH B 24 324 222 HOH HOH . K 4 HOH B 25 325 70 HOH HOH . K 4 HOH B 26 326 6 HOH HOH . K 4 HOH B 27 327 32 HOH HOH . K 4 HOH B 28 328 151 HOH HOH . K 4 HOH B 29 329 241 HOH HOH . K 4 HOH B 30 330 165 HOH HOH . K 4 HOH B 31 331 146 HOH HOH . K 4 HOH B 32 332 246 HOH HOH . K 4 HOH B 33 333 179 HOH HOH . K 4 HOH B 34 334 235 HOH HOH . K 4 HOH B 35 335 10 HOH HOH . K 4 HOH B 36 336 250 HOH HOH . K 4 HOH B 37 337 383 HOH HOH . K 4 HOH B 38 338 97 HOH HOH . K 4 HOH B 39 339 39 HOH HOH . K 4 HOH B 40 340 131 HOH HOH . K 4 HOH B 41 341 49 HOH HOH . K 4 HOH B 42 342 112 HOH HOH . K 4 HOH B 43 343 129 HOH HOH . K 4 HOH B 44 344 17 HOH HOH . K 4 HOH B 45 345 168 HOH HOH . K 4 HOH B 46 346 74 HOH HOH . K 4 HOH B 47 347 212 HOH HOH . K 4 HOH B 48 348 181 HOH HOH . K 4 HOH B 49 349 234 HOH HOH . K 4 HOH B 50 350 137 HOH HOH . K 4 HOH B 51 351 262 HOH HOH . K 4 HOH B 52 352 254 HOH HOH . K 4 HOH B 53 353 156 HOH HOH . K 4 HOH B 54 354 122 HOH HOH . K 4 HOH B 55 355 46 HOH HOH . K 4 HOH B 56 356 93 HOH HOH . K 4 HOH B 57 357 109 HOH HOH . K 4 HOH B 58 358 134 HOH HOH . K 4 HOH B 59 359 128 HOH HOH . K 4 HOH B 60 360 72 HOH HOH . K 4 HOH B 61 361 15 HOH HOH . K 4 HOH B 62 362 324 HOH HOH . K 4 HOH B 63 363 36 HOH HOH . K 4 HOH B 64 364 406 HOH HOH . K 4 HOH B 65 365 115 HOH HOH . K 4 HOH B 66 366 276 HOH HOH . K 4 HOH B 67 367 309 HOH HOH . K 4 HOH B 68 368 301 HOH HOH . K 4 HOH B 69 369 304 HOH HOH . K 4 HOH B 70 370 208 HOH HOH . K 4 HOH B 71 371 148 HOH HOH . K 4 HOH B 72 372 141 HOH HOH . K 4 HOH B 73 373 441 HOH HOH . K 4 HOH B 74 374 171 HOH HOH . K 4 HOH B 75 375 207 HOH HOH . K 4 HOH B 76 376 178 HOH HOH . K 4 HOH B 77 377 271 HOH HOH . K 4 HOH B 78 378 56 HOH HOH . K 4 HOH B 79 379 252 HOH HOH . K 4 HOH B 80 380 144 HOH HOH . K 4 HOH B 81 381 245 HOH HOH . K 4 HOH B 82 382 336 HOH HOH . K 4 HOH B 83 383 95 HOH HOH . K 4 HOH B 84 384 147 HOH HOH . K 4 HOH B 85 385 200 HOH HOH . K 4 HOH B 86 386 359 HOH HOH . K 4 HOH B 87 387 130 HOH HOH . K 4 HOH B 88 388 48 HOH HOH . K 4 HOH B 89 389 293 HOH HOH . K 4 HOH B 90 390 58 HOH HOH . K 4 HOH B 91 391 247 HOH HOH . K 4 HOH B 92 392 314 HOH HOH . K 4 HOH B 93 393 408 HOH HOH . K 4 HOH B 94 394 404 HOH HOH . K 4 HOH B 95 395 154 HOH HOH . K 4 HOH B 96 396 416 HOH HOH . K 4 HOH B 97 397 376 HOH HOH . K 4 HOH B 98 398 308 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . A . I 3 16.471 13.011 32.772 0.53 45.59 ? C1 PGE 203 B 1 HETATM 2 C C1 PGE . B . I 3 16.467 13.012 32.746 0.48 45.58 ? C1 PGE 203 B 1 HETATM 3 O O1 PGE . A . I 3 17.343 12.864 31.669 0.53 51.17 ? O1 PGE 203 B 1 HETATM 4 O O1 PGE . B . I 3 17.386 12.874 31.681 0.48 51.19 ? O1 PGE 203 B 1 HETATM 5 C C2 PGE . A . I 3 16.855 14.169 33.653 0.53 50.15 ? C2 PGE 203 B 1 HETATM 6 C C2 PGE . B . I 3 16.821 14.155 33.655 0.48 50.15 ? C2 PGE 203 B 1 HETATM 7 O O2 PGE . A . I 3 17.886 13.782 34.55 0.53 50.4 ? O2 PGE 203 B 1 HETATM 8 O O2 PGE . B . I 3 17.908 13.794 34.493 0.48 50.39 ? O2 PGE 203 B 1 HETATM 9 C C3 PGE . A . I 3 17.939 14.577 35.727 0.53 46.09 ? C3 PGE 203 B 1 HETATM 10 C C3 PGE . B . I 3 18.087 14.682 35.587 0.48 46.28 ? C3 PGE 203 B 1 HETATM 11 C C4 PGE . A . I 3 17.443 13.793 36.896 0.53 36.52 ? C4 PGE 203 B 1 HETATM 12 C C4 PGE . B . I 3 17.479 14.109 36.823 0.48 36.8 ? C4 PGE 203 B 1 HETATM 13 O O4 PGE . A . I 3 18.536 11.853 40.984 0.53 31.08 ? O4 PGE 203 B 1 HETATM 14 O O4 PGE . B . I 3 19.72 14.069 40.229 0.48 33.1 ? O4 PGE 203 B 1 HETATM 15 C C6 PGE . A . I 3 18.832 12.951 40.127 0.53 39.57 ? C6 PGE 203 B 1 HETATM 16 C C6 PGE . B . I 3 19.253 12.871 39.622 0.48 40.52 ? C6 PGE 203 B 1 HETATM 17 C C5 PGE . A . I 3 18.156 12.775 38.805 0.53 40.24 ? C5 PGE 203 B 1 HETATM 18 C C5 PGE . B . I 3 18.044 13.153 38.792 0.48 40.6 ? C5 PGE 203 B 1 HETATM 19 O O3 PGE . A . I 3 18.305 13.947 38.01 0.53 42.3 ? O3 PGE 203 B 1 HETATM 20 O O3 PGE . B . I 3 18.354 13.163 37.405 0.48 41.84 ? O3 PGE 203 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #