data_8D02 # _model_server_result.job_id uA1tBdZPe6c8upzwc3mqBQ _model_server_result.datetime_utc '2024-11-15 10:14:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d02 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 8D02 # _exptl.entry_id 8D02 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8D02 _cell.length_a 99.902 _cell.length_b 99.902 _cell.length_c 99.902 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D02 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 87 A ASP 87 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc2 A O SER 89 A SER 89 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc3 A OE1 GLU 94 A GLU 94 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc4 A OE2 GLU 94 A GLU 94 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc5 A O THR 153 A THR 153 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc6 A OG1 THR 153 A THR 153 1_555 B CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc7 B CA CA . A CA 201 1_555 C O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc8 B CA CA . A CA 201 1_555 C O HOH . A HOH 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8D02 _atom_sites.fract_transf_matrix[1][1] 0.01001 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01001 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01001 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 201 201 CA CA . C 3 HOH A 1 301 32 HOH HOH . C 3 HOH A 2 302 27 HOH HOH . C 3 HOH A 3 303 31 HOH HOH . C 3 HOH A 4 304 59 HOH HOH . C 3 HOH A 5 305 18 HOH HOH . C 3 HOH A 6 306 21 HOH HOH . C 3 HOH A 7 307 24 HOH HOH . C 3 HOH A 8 308 6 HOH HOH . C 3 HOH A 9 309 15 HOH HOH . C 3 HOH A 10 310 44 HOH HOH . C 3 HOH A 11 311 43 HOH HOH . C 3 HOH A 12 312 77 HOH HOH . C 3 HOH A 13 313 82 HOH HOH . C 3 HOH A 14 314 28 HOH HOH . C 3 HOH A 15 315 69 HOH HOH . C 3 HOH A 16 316 36 HOH HOH . C 3 HOH A 17 317 22 HOH HOH . C 3 HOH A 18 318 9 HOH HOH . C 3 HOH A 19 319 14 HOH HOH . C 3 HOH A 20 320 55 HOH HOH . C 3 HOH A 21 321 61 HOH HOH . C 3 HOH A 22 322 71 HOH HOH . C 3 HOH A 23 323 37 HOH HOH . C 3 HOH A 24 324 73 HOH HOH . C 3 HOH A 25 325 66 HOH HOH . C 3 HOH A 26 326 13 HOH HOH . C 3 HOH A 27 327 20 HOH HOH . C 3 HOH A 28 328 47 HOH HOH . C 3 HOH A 29 329 51 HOH HOH . C 3 HOH A 30 330 12 HOH HOH . C 3 HOH A 31 331 4 HOH HOH . C 3 HOH A 32 332 53 HOH HOH . C 3 HOH A 33 333 41 HOH HOH . C 3 HOH A 34 334 79 HOH HOH . C 3 HOH A 35 335 5 HOH HOH . C 3 HOH A 36 336 48 HOH HOH . C 3 HOH A 37 337 16 HOH HOH . C 3 HOH A 38 338 23 HOH HOH . C 3 HOH A 39 339 17 HOH HOH . C 3 HOH A 40 340 57 HOH HOH . C 3 HOH A 41 341 50 HOH HOH . C 3 HOH A 42 342 40 HOH HOH . C 3 HOH A 43 343 42 HOH HOH . C 3 HOH A 44 344 11 HOH HOH . C 3 HOH A 45 345 46 HOH HOH . C 3 HOH A 46 346 81 HOH HOH . C 3 HOH A 47 347 30 HOH HOH . C 3 HOH A 48 348 63 HOH HOH . C 3 HOH A 49 349 67 HOH HOH . C 3 HOH A 50 350 26 HOH HOH . C 3 HOH A 51 351 39 HOH HOH . C 3 HOH A 52 352 8 HOH HOH . C 3 HOH A 53 353 3 HOH HOH . C 3 HOH A 54 354 29 HOH HOH . C 3 HOH A 55 355 62 HOH HOH . C 3 HOH A 56 356 38 HOH HOH . C 3 HOH A 57 357 33 HOH HOH . C 3 HOH A 58 358 35 HOH HOH . C 3 HOH A 59 359 7 HOH HOH . C 3 HOH A 60 360 34 HOH HOH . C 3 HOH A 61 361 56 HOH HOH . C 3 HOH A 62 362 45 HOH HOH . C 3 HOH A 63 363 25 HOH HOH . C 3 HOH A 64 364 19 HOH HOH . C 3 HOH A 65 365 64 HOH HOH . C 3 HOH A 66 366 10 HOH HOH . C 3 HOH A 67 367 2 HOH HOH . C 3 HOH A 68 368 70 HOH HOH . C 3 HOH A 69 369 74 HOH HOH . C 3 HOH A 70 370 58 HOH HOH . C 3 HOH A 71 371 68 HOH HOH . C 3 HOH A 72 372 75 HOH HOH . C 3 HOH A 73 373 65 HOH HOH . C 3 HOH A 74 374 52 HOH HOH . C 3 HOH A 75 375 49 HOH HOH . C 3 HOH A 76 376 54 HOH HOH . C 3 HOH A 77 377 78 HOH HOH . C 3 HOH A 78 378 80 HOH HOH . C 3 HOH A 79 379 60 HOH HOH . C 3 HOH A 80 380 76 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 26 _atom_site.Cartn_y 34.447 _atom_site.Cartn_z 45.957 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.93 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #