data_8D0Q # _model_server_result.job_id a87eStsYWq_Ly8HQH_Mlxw _model_server_result.datetime_utc '2024-12-01 03:25:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 8D0Q # _exptl.entry_id 8D0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8D0Q _cell.length_a 127.81 _cell.length_b 127.81 _cell.length_c 127.81 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 14_665 -x+1,-y+3/2,z -1 0 0 0 -1 0 0 0 1 127.81 191.715 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 2 1 GAL NAG C1 O1 . O4 HO4 . sing 3 ? 3 3 2 FUC GAL C1 O1 . O2 HO2 . sing 4 ? 4 2 1 GAL NDG C1 O1 . O4 HO4 . sing 5 ? 4 3 2 FUC GAL C1 O1 . O2 HO2 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG B 1 NAG 2 n B NAG 2 B 2 NAG B 2 NAG 3 n C NAG 1 C 1 NAG C 1 NAG 3 n C GAL 2 C 2 GAL C 2 GAL 3 n C FUC 3 C 3 FUC C 3 FUC 4 n D NDG 1 D 1 NDG C 1 NDG 4 n D GAL 2 D 2 GAL C 2 GAL 4 n D FUC 3 D 3 FUC C 3 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 45 A CYS 82 1_555 A SG CYS 298 A CYS 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 54 A CYS 91 1_555 A SG CYS 301 A CYS 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 A SG CYS 153 A CYS 190 1_555 A SG CYS 201 A CYS 238 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 153 A CYS 190 1_555 A SG CYS 201 A CYS 238 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.041 ? covale ? covale1 A ND2 ASN 116 A ASN 153 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? covale ? covale2 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.423 ? covale ? covale3 C O4 NAG . C NAG 1 1_555 C C1 GAL . C GAL 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.435 ? covale ? covale4 C O2 GAL . C GAL 2 1_555 C C1 FUC . C FUC 3 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.447 ? covale ? covale5 D O4 NDG . D NDG 1 1_555 D C1 GAL . D GAL 2 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.435 ? covale ? covale6 D O2 GAL . D GAL 2 1_555 D C1 FUC . D FUC 3 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.447 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 196 n n PB O2B GDP sing 197 n n PB O3B GDP sing 198 n n PB O3A GDP sing 199 n n O2B HOB2 GDP sing 200 n n O3B HOB3 GDP sing 201 n n O3A PA GDP sing 202 n n PA O1A GDP doub 203 n n PA O2A GDP sing 204 n n PA O5' GDP sing 205 n n O2A HOA2 GDP sing 206 n n O5' C5' GDP sing 207 n n C5' C4' GDP sing 208 n n C5' H5' GDP sing 209 n n C5' "H5''" GDP sing 210 n n C4' O4' GDP sing 211 n n C4' C3' GDP sing 212 n n C4' H4' GDP sing 213 n n O4' C1' GDP sing 214 n n C3' O3' GDP sing 215 n n C3' C2' GDP sing 216 n n C3' H3' GDP sing 217 n n O3' HO3' GDP sing 218 n n C2' O2' GDP sing 219 n n C2' C1' GDP sing 220 n n C2' H2' GDP sing 221 n n O2' HO2' GDP sing 222 n n C1' N9 GDP sing 223 n n C1' H1' GDP sing 224 n n N9 C8 GDP sing 225 n y N9 C4 GDP sing 226 n y C8 N7 GDP doub 227 n y C8 H8 GDP sing 228 n n N7 C5 GDP sing 229 n y C5 C6 GDP sing 230 n n C5 C4 GDP doub 231 n y C6 O6 GDP doub 232 n n C6 N1 GDP sing 233 n n N1 C2 GDP sing 234 n n N1 HN1 GDP sing 235 n n C2 N2 GDP sing 236 n n C2 N3 GDP doub 237 n n N2 HN21 GDP sing 238 n n N2 HN22 GDP sing 239 n n N3 C4 GDP sing 240 n n # _atom_sites.entry_id 8D0Q _atom_sites.fract_transf_matrix[1][1] 0.007824 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007824 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 6CK A 1 401 401 6CK 6CK . F 6 GDP A 1 402 402 GDP GDP . G 7 SO4 A 1 403 403 SO4 SO4 . H 7 SO4 A 1 404 404 SO4 SO4 . I 8 HOH A 1 501 501 HOH HOH . I 8 HOH A 2 502 502 HOH HOH . I 8 HOH A 3 503 503 HOH HOH . I 8 HOH A 4 504 504 HOH HOH . I 8 HOH A 5 505 505 HOH HOH . I 8 HOH A 6 506 506 HOH HOH . I 8 HOH A 7 507 507 HOH HOH . I 8 HOH A 8 508 508 HOH HOH . I 8 HOH A 9 509 509 HOH HOH . I 8 HOH A 10 510 510 HOH HOH . I 8 HOH A 11 511 511 HOH HOH . I 8 HOH A 12 512 512 HOH HOH . I 8 HOH A 13 513 513 HOH HOH . I 8 HOH A 14 514 514 HOH HOH . I 8 HOH A 15 515 515 HOH HOH . I 8 HOH A 16 516 516 HOH HOH . I 8 HOH A 17 517 517 HOH HOH . I 8 HOH A 18 518 518 HOH HOH . I 8 HOH A 19 519 519 HOH HOH . I 8 HOH A 20 520 520 HOH HOH . I 8 HOH A 21 521 521 HOH HOH . I 8 HOH A 22 522 522 HOH HOH . I 8 HOH A 23 523 523 HOH HOH . I 8 HOH A 24 524 524 HOH HOH . I 8 HOH A 25 525 525 HOH HOH . I 8 HOH A 26 526 526 HOH HOH . I 8 HOH A 27 527 527 HOH HOH . I 8 HOH A 28 528 528 HOH HOH . I 8 HOH A 29 529 529 HOH HOH . I 8 HOH A 30 530 530 HOH HOH . I 8 HOH A 31 531 531 HOH HOH . I 8 HOH A 32 532 532 HOH HOH . I 8 HOH A 33 533 533 HOH HOH . I 8 HOH A 34 534 534 HOH HOH . I 8 HOH A 35 535 535 HOH HOH . I 8 HOH A 36 536 536 HOH HOH . I 8 HOH A 37 537 537 HOH HOH . I 8 HOH A 38 538 538 HOH HOH . I 8 HOH A 39 539 539 HOH HOH . I 8 HOH A 40 540 540 HOH HOH . I 8 HOH A 41 541 541 HOH HOH . I 8 HOH A 42 542 542 HOH HOH . I 8 HOH A 43 543 543 HOH HOH . I 8 HOH A 44 544 544 HOH HOH . I 8 HOH A 45 545 545 HOH HOH . I 8 HOH A 46 546 546 HOH HOH . I 8 HOH A 47 547 547 HOH HOH . I 8 HOH A 48 548 548 HOH HOH . I 8 HOH A 49 549 549 HOH HOH . I 8 HOH A 50 550 550 HOH HOH . I 8 HOH A 51 551 551 HOH HOH . I 8 HOH A 52 552 552 HOH HOH . I 8 HOH A 53 553 553 HOH HOH . I 8 HOH A 54 554 554 HOH HOH . I 8 HOH A 55 555 555 HOH HOH . I 8 HOH A 56 556 556 HOH HOH . I 8 HOH A 57 557 557 HOH HOH . I 8 HOH A 58 558 558 HOH HOH . I 8 HOH A 59 559 559 HOH HOH . I 8 HOH A 60 560 560 HOH HOH . I 8 HOH A 61 561 561 HOH HOH . I 8 HOH A 62 562 562 HOH HOH . I 8 HOH A 63 563 563 HOH HOH . I 8 HOH A 64 564 564 HOH HOH . I 8 HOH A 65 565 565 HOH HOH . I 8 HOH A 66 566 566 HOH HOH . I 8 HOH A 67 567 567 HOH HOH . I 8 HOH A 68 568 568 HOH HOH . I 8 HOH A 69 569 569 HOH HOH . I 8 HOH A 70 570 570 HOH HOH . I 8 HOH A 71 571 571 HOH HOH . I 8 HOH A 72 572 572 HOH HOH . I 8 HOH A 73 573 573 HOH HOH . I 8 HOH A 74 574 574 HOH HOH . I 8 HOH A 75 575 575 HOH HOH . I 8 HOH A 76 576 576 HOH HOH . I 8 HOH A 77 577 577 HOH HOH . I 8 HOH A 78 578 578 HOH HOH . I 8 HOH A 79 579 579 HOH HOH . I 8 HOH A 80 580 580 HOH HOH . I 8 HOH A 81 581 581 HOH HOH . I 8 HOH A 82 582 582 HOH HOH . I 8 HOH A 83 583 583 HOH HOH . I 8 HOH A 84 584 584 HOH HOH . I 8 HOH A 85 585 585 HOH HOH . I 8 HOH A 86 586 586 HOH HOH . I 8 HOH A 87 587 587 HOH HOH . I 8 HOH A 88 588 588 HOH HOH . I 8 HOH A 89 589 589 HOH HOH . I 8 HOH A 90 590 590 HOH HOH . I 8 HOH A 91 591 591 HOH HOH . I 8 HOH A 92 592 592 HOH HOH . I 8 HOH A 93 593 593 HOH HOH . I 8 HOH A 94 594 594 HOH HOH . I 8 HOH A 95 595 595 HOH HOH . I 8 HOH A 96 596 596 HOH HOH . I 8 HOH A 97 597 597 HOH HOH . I 8 HOH A 98 598 598 HOH HOH . I 8 HOH A 99 599 599 HOH HOH . I 8 HOH A 100 600 600 HOH HOH . I 8 HOH A 101 601 601 HOH HOH . I 8 HOH A 102 602 602 HOH HOH . I 8 HOH A 103 603 603 HOH HOH . I 8 HOH A 104 604 604 HOH HOH . I 8 HOH A 105 605 605 HOH HOH . I 8 HOH A 106 606 606 HOH HOH . I 8 HOH A 107 607 607 HOH HOH . I 8 HOH A 108 608 608 HOH HOH . I 8 HOH A 109 609 609 HOH HOH . I 8 HOH A 110 610 610 HOH HOH . I 8 HOH A 111 611 611 HOH HOH . I 8 HOH A 112 612 612 HOH HOH . I 8 HOH A 113 613 613 HOH HOH . I 8 HOH A 114 614 614 HOH HOH . I 8 HOH A 115 615 615 HOH HOH . I 8 HOH A 116 616 616 HOH HOH . I 8 HOH A 117 617 617 HOH HOH . I 8 HOH A 118 618 618 HOH HOH . I 8 HOH A 119 619 619 HOH HOH . I 8 HOH A 120 620 620 HOH HOH . I 8 HOH A 121 621 621 HOH HOH . I 8 HOH A 122 622 622 HOH HOH . I 8 HOH A 123 623 623 HOH HOH . I 8 HOH A 124 624 624 HOH HOH . I 8 HOH A 125 625 625 HOH HOH . I 8 HOH A 126 626 626 HOH HOH . I 8 HOH A 127 627 627 HOH HOH . I 8 HOH A 128 628 628 HOH HOH . I 8 HOH A 129 629 629 HOH HOH . I 8 HOH A 130 630 630 HOH HOH . I 8 HOH A 131 631 631 HOH HOH . I 8 HOH A 132 632 632 HOH HOH . I 8 HOH A 133 633 633 HOH HOH . I 8 HOH A 134 634 634 HOH HOH . I 8 HOH A 135 635 635 HOH HOH . I 8 HOH A 136 636 636 HOH HOH . I 8 HOH A 137 637 637 HOH HOH . I 8 HOH A 138 638 638 HOH HOH . I 8 HOH A 139 639 639 HOH HOH . I 8 HOH A 140 640 640 HOH HOH . I 8 HOH A 141 641 641 HOH HOH . I 8 HOH A 142 642 642 HOH HOH . I 8 HOH A 143 643 643 HOH HOH . I 8 HOH A 144 644 644 HOH HOH . I 8 HOH A 145 645 645 HOH HOH . I 8 HOH A 146 646 646 HOH HOH . I 8 HOH A 147 647 647 HOH HOH . I 8 HOH A 148 648 648 HOH HOH . I 8 HOH A 149 649 649 HOH HOH . I 8 HOH A 150 650 650 HOH HOH . I 8 HOH A 151 651 651 HOH HOH . I 8 HOH A 152 652 652 HOH HOH . I 8 HOH A 153 653 653 HOH HOH . I 8 HOH A 154 654 654 HOH HOH . I 8 HOH A 155 655 655 HOH HOH . I 8 HOH A 156 656 656 HOH HOH . I 8 HOH A 157 657 657 HOH HOH . I 8 HOH A 158 658 658 HOH HOH . I 8 HOH A 159 659 659 HOH HOH . I 8 HOH A 160 660 660 HOH HOH . I 8 HOH A 161 661 661 HOH HOH . I 8 HOH A 162 662 662 HOH HOH . I 8 HOH A 163 663 663 HOH HOH . I 8 HOH A 164 664 664 HOH HOH . I 8 HOH A 165 665 665 HOH HOH . I 8 HOH A 166 666 666 HOH HOH . I 8 HOH A 167 667 667 HOH HOH . I 8 HOH A 168 668 668 HOH HOH . I 8 HOH A 169 669 669 HOH HOH . I 8 HOH A 170 670 670 HOH HOH . I 8 HOH A 171 671 671 HOH HOH . I 8 HOH A 172 672 672 HOH HOH . I 8 HOH A 173 673 673 HOH HOH . I 8 HOH A 174 674 674 HOH HOH . I 8 HOH A 175 675 675 HOH HOH . I 8 HOH A 176 676 676 HOH HOH . I 8 HOH A 177 677 677 HOH HOH . I 8 HOH A 178 678 678 HOH HOH . I 8 HOH A 179 679 679 HOH HOH . I 8 HOH A 180 680 680 HOH HOH . I 8 HOH A 181 681 681 HOH HOH . I 8 HOH A 182 682 682 HOH HOH . I 8 HOH A 183 683 683 HOH HOH . I 8 HOH A 184 684 684 HOH HOH . I 8 HOH A 185 685 685 HOH HOH . I 8 HOH A 186 686 686 HOH HOH . I 8 HOH A 187 687 687 HOH HOH . I 8 HOH A 188 688 688 HOH HOH . I 8 HOH A 189 689 689 HOH HOH . I 8 HOH A 190 690 690 HOH HOH . I 8 HOH A 191 691 691 HOH HOH . I 8 HOH A 192 692 692 HOH HOH . I 8 HOH A 193 693 693 HOH HOH . I 8 HOH A 194 694 694 HOH HOH . I 8 HOH A 195 695 695 HOH HOH . I 8 HOH A 196 696 696 HOH HOH . I 8 HOH A 197 697 697 HOH HOH . I 8 HOH A 198 698 698 HOH HOH . I 8 HOH A 199 699 699 HOH HOH . I 8 HOH A 200 700 700 HOH HOH . I 8 HOH A 201 701 701 HOH HOH . I 8 HOH A 202 702 702 HOH HOH . I 8 HOH A 203 703 703 HOH HOH . I 8 HOH A 204 704 704 HOH HOH . I 8 HOH A 205 705 705 HOH HOH . I 8 HOH A 206 706 706 HOH HOH . I 8 HOH A 207 707 707 HOH HOH . I 8 HOH A 208 708 708 HOH HOH . I 8 HOH A 209 709 709 HOH HOH . I 8 HOH A 210 710 710 HOH HOH . I 8 HOH A 211 711 711 HOH HOH . I 8 HOH A 212 712 712 HOH HOH . I 8 HOH A 213 713 713 HOH HOH . I 8 HOH A 214 714 714 HOH HOH . I 8 HOH A 215 715 715 HOH HOH . I 8 HOH A 216 716 716 HOH HOH . I 8 HOH A 217 717 717 HOH HOH . I 8 HOH A 218 718 718 HOH HOH . I 8 HOH A 219 719 719 HOH HOH . I 8 HOH A 220 720 720 HOH HOH . I 8 HOH A 221 721 721 HOH HOH . I 8 HOH A 222 722 722 HOH HOH . I 8 HOH A 223 723 723 HOH HOH . I 8 HOH A 224 724 724 HOH HOH . I 8 HOH A 225 725 725 HOH HOH . I 8 HOH A 226 726 726 HOH HOH . I 8 HOH A 227 727 727 HOH HOH . I 8 HOH A 228 728 728 HOH HOH . I 8 HOH A 229 729 729 HOH HOH . I 8 HOH A 230 730 730 HOH HOH . I 8 HOH A 231 731 731 HOH HOH . I 8 HOH A 232 732 732 HOH HOH . I 8 HOH A 233 733 733 HOH HOH . I 8 HOH A 234 734 734 HOH HOH . I 8 HOH A 235 735 735 HOH HOH . I 8 HOH A 236 736 736 HOH HOH . I 8 HOH A 237 737 737 HOH HOH . I 8 HOH A 238 738 738 HOH HOH . I 8 HOH A 239 739 739 HOH HOH . I 8 HOH A 240 740 740 HOH HOH . I 8 HOH A 241 741 741 HOH HOH . I 8 HOH A 242 742 742 HOH HOH . I 8 HOH A 243 743 743 HOH HOH . I 8 HOH A 244 744 744 HOH HOH . I 8 HOH A 245 745 745 HOH HOH . I 8 HOH A 246 746 746 HOH HOH . I 8 HOH A 247 747 747 HOH HOH . I 8 HOH A 248 748 748 HOH HOH . I 8 HOH A 249 749 749 HOH HOH . I 8 HOH A 250 750 750 HOH HOH . I 8 HOH A 251 751 751 HOH HOH . I 8 HOH A 252 752 752 HOH HOH . I 8 HOH A 253 753 753 HOH HOH . I 8 HOH A 254 754 754 HOH HOH . I 8 HOH A 255 755 755 HOH HOH . I 8 HOH A 256 756 756 HOH HOH . I 8 HOH A 257 757 757 HOH HOH . I 8 HOH A 258 758 758 HOH HOH . I 8 HOH A 259 759 759 HOH HOH . I 8 HOH A 260 760 760 HOH HOH . I 8 HOH A 261 761 761 HOH HOH . I 8 HOH A 262 762 762 HOH HOH . I 8 HOH A 263 763 763 HOH HOH . I 8 HOH A 264 764 764 HOH HOH . I 8 HOH A 265 765 765 HOH HOH . I 8 HOH A 266 766 766 HOH HOH . I 8 HOH A 267 767 767 HOH HOH . I 8 HOH A 268 768 768 HOH HOH . I 8 HOH A 269 769 769 HOH HOH . I 8 HOH A 270 770 770 HOH HOH . I 8 HOH A 271 771 771 HOH HOH . I 8 HOH A 272 772 772 HOH HOH . I 8 HOH A 273 773 773 HOH HOH . I 8 HOH A 274 774 774 HOH HOH . I 8 HOH A 275 775 775 HOH HOH . I 8 HOH A 276 776 776 HOH HOH . I 8 HOH A 277 777 777 HOH HOH . I 8 HOH A 278 778 778 HOH HOH . I 8 HOH A 279 779 779 HOH HOH . I 8 HOH A 280 780 780 HOH HOH . I 8 HOH A 281 781 781 HOH HOH . I 8 HOH A 282 782 782 HOH HOH . I 8 HOH A 283 783 783 HOH HOH . I 8 HOH A 284 784 784 HOH HOH . I 8 HOH A 285 785 785 HOH HOH . I 8 HOH A 286 786 786 HOH HOH . I 8 HOH A 287 787 787 HOH HOH . I 8 HOH A 288 788 788 HOH HOH . I 8 HOH A 289 789 789 HOH HOH . I 8 HOH A 290 790 790 HOH HOH . I 8 HOH A 291 791 791 HOH HOH . I 8 HOH A 292 792 792 HOH HOH . I 8 HOH A 293 793 793 HOH HOH . I 8 HOH A 294 794 794 HOH HOH . I 8 HOH A 295 795 795 HOH HOH . I 8 HOH A 296 796 796 HOH HOH . I 8 HOH A 297 797 797 HOH HOH . I 8 HOH A 298 798 798 HOH HOH . I 8 HOH A 299 799 799 HOH HOH . I 8 HOH A 300 800 800 HOH HOH . I 8 HOH A 301 801 801 HOH HOH . I 8 HOH A 302 802 802 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . B . F 6 88.422 92.279 49.68 0.25 24.72 ? PB GDP 402 A 1 HETATM 2 O O1B GDP . B . F 6 87.36 92.379 48.653 0.25 26.86 ? O1B GDP 402 A 1 HETATM 3 O O2B GDP . B . F 6 88.481 90.775 50.25 0.25 39.06 ? O2B GDP 402 A 1 HETATM 4 O O3B GDP . B . F 6 88.106 93.299 50.884 0.25 19.06 ? O3B GDP 402 A 1 HETATM 5 O O3A GDP . B . F 6 89.838 92.66 49.021 0.25 12.64 ? O3A GDP 402 A 1 HETATM 6 P PA GDP . B . F 6 91.124 91.792 48.585 0.25 22.2 ? PA GDP 402 A 1 HETATM 7 O O1A GDP . B . F 6 92.314 92.783 48.145 0.25 31.34 ? O1A GDP 402 A 1 HETATM 8 O O2A GDP . B . F 6 91.571 90.959 49.723 0.25 20.93 ? O2A GDP 402 A 1 HETATM 9 O O5' GDP . B . F 6 90.73 90.846 47.345 0.25 30.25 ? O5' GDP 402 A 1 HETATM 10 C C5' GDP . B . F 6 89.556 91.072 46.552 0.25 20.09 ? C5' GDP 402 A 1 HETATM 11 C C4' GDP . B . F 6 89.414 89.893 45.591 0.25 23.26 ? C4' GDP 402 A 1 HETATM 12 O O4' GDP . B . F 6 90.707 89.67 45.018 0.25 13.61 ? O4' GDP 402 A 1 HETATM 13 C C3' GDP . B . F 6 89.001 88.608 46.322 0.25 22.94 ? C3' GDP 402 A 1 HETATM 14 O O3' GDP . B . F 6 88.21 87.773 45.465 0.25 27.37 ? O3' GDP 402 A 1 HETATM 15 C C2' GDP . B . F 6 90.354 87.943 46.623 0.25 19.82 ? C2' GDP 402 A 1 HETATM 16 O O2' GDP . B . F 6 90.235 86.525 46.717 0.25 17.93 ? O2' GDP 402 A 1 HETATM 17 C C1' GDP . B . F 6 91.213 88.38 45.413 0.25 11.41 ? C1' GDP 402 A 1 HETATM 18 N N9 GDP . B . F 6 92.598 88.596 45.836 0.25 30.65 ? N9 GDP 402 A 1 HETATM 19 C C8 GDP . B . F 6 93.063 88.953 47.079 0.25 21.69 ? C8 GDP 402 A 1 HETATM 20 N N7 GDP . B . F 6 94.363 89.071 47.048 0.25 14.1 ? N7 GDP 402 A 1 HETATM 21 C C5 GDP . B . F 6 94.786 88.822 45.785 0.25 15.26 ? C5 GDP 402 A 1 HETATM 22 C C6 GDP . B . F 6 96.03 88.79 45.148 0.25 28.06 ? C6 GDP 402 A 1 HETATM 23 O O6 GDP . B . F 6 97.034 89.032 45.789 0.25 48.71 ? O6 GDP 402 A 1 HETATM 24 N N1 GDP . B . F 6 96.094 88.489 43.833 0.25 27.37 ? N1 GDP 402 A 1 HETATM 25 C C2 GDP . B . F 6 94.963 88.217 43.123 0.25 36.22 ? C2 GDP 402 A 1 HETATM 26 N N2 GDP . B . F 6 95.051 87.916 41.787 0.25 41.97 ? N2 GDP 402 A 1 HETATM 27 N N3 GDP . B . F 6 93.786 88.239 43.705 0.25 30.24 ? N3 GDP 402 A 1 HETATM 28 C C4 GDP . B . F 6 93.668 88.528 45.008 0.25 27.59 ? C4 GDP 402 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #