data_8D0R # _model_server_result.job_id vx1UK_sk6KseHoCrmaqTtQ _model_server_result.datetime_utc '2024-12-01 06:45:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d0r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 8D0R # _exptl.entry_id 8D0R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8D0R _cell.length_a 127.69 _cell.length_b 127.69 _cell.length_c 127.69 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D0R _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 14_565 -x,-y+3/2,z -1 0 0 0 -1 0 0 0 1 0 191.535 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 3 2 1 GAL NAG C1 O1 . O4 HO4 . sing 4 ? 3 3 2 FUC GAL C1 O1 . O2 HO2 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG A 400 NAG 2 n B NAG 2 B 2 NAG A 401 NAG 2 n B BMA 3 B 3 BMA A 402 BMA 3 n C NAG 1 C 1 NAG A 601 NAG 3 n C GAL 2 C 2 GAL A 600 GAL 3 n C FUC 3 C 3 FUC A 602 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 45 A CYS 82 1_555 A SG CYS 298 A CYS 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 54 A CYS 91 1_555 A SG CYS 301 A CYS 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? disulf ? disulf3 A SG CYS 153 A CYS 190 1_555 A SG CYS 201 A CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? covale ? covale1 A ND2 ASN 116 A ASN 153 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale2 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale3 B O4 NAG . B NAG 2 1_555 B C1 BMA . B BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale4 C O4 NAG . C NAG 1 1_555 C C1 GAL . C GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale5 C O2 GAL . C GAL 2 1_555 C C1 FUC . C FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 163 n n PB O2B GDP sing 164 n n PB O3B GDP sing 165 n n PB O3A GDP sing 166 n n O2B HOB2 GDP sing 167 n n O3B HOB3 GDP sing 168 n n O3A PA GDP sing 169 n n PA O1A GDP doub 170 n n PA O2A GDP sing 171 n n PA O5' GDP sing 172 n n O2A HOA2 GDP sing 173 n n O5' C5' GDP sing 174 n n C5' C4' GDP sing 175 n n C5' H5' GDP sing 176 n n C5' "H5''" GDP sing 177 n n C4' O4' GDP sing 178 n n C4' C3' GDP sing 179 n n C4' H4' GDP sing 180 n n O4' C1' GDP sing 181 n n C3' O3' GDP sing 182 n n C3' C2' GDP sing 183 n n C3' H3' GDP sing 184 n n O3' HO3' GDP sing 185 n n C2' O2' GDP sing 186 n n C2' C1' GDP sing 187 n n C2' H2' GDP sing 188 n n O2' HO2' GDP sing 189 n n C1' N9 GDP sing 190 n n C1' H1' GDP sing 191 n n N9 C8 GDP sing 192 n y N9 C4 GDP sing 193 n y C8 N7 GDP doub 194 n y C8 H8 GDP sing 195 n n N7 C5 GDP sing 196 n y C5 C6 GDP sing 197 n n C5 C4 GDP doub 198 n y C6 O6 GDP doub 199 n n C6 N1 GDP sing 200 n n N1 C2 GDP sing 201 n n N1 HN1 GDP sing 202 n n C2 N2 GDP sing 203 n n C2 N3 GDP doub 204 n n N2 HN21 GDP sing 205 n n N2 HN22 GDP sing 206 n n N3 C4 GDP sing 207 n n # _atom_sites.entry_id 8D0R _atom_sites.fract_transf_matrix[1][1] 0.007831 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007831 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GDP A 1 401 500 GDP GDP . E 5 SO4 A 1 402 700 SO4 SO4 . F 5 SO4 A 1 403 701 SO4 SO4 . G 5 SO4 A 1 404 702 SO4 SO4 . H 6 EDO A 1 405 703 EDO EDO . I 6 EDO A 1 406 704 EDO EDO . J 6 EDO A 1 407 705 EDO EDO . K 7 HOH A 1 501 234 HOH HOH . K 7 HOH A 2 502 235 HOH HOH . K 7 HOH A 3 503 310 HOH HOH . K 7 HOH A 4 504 206 HOH HOH . K 7 HOH A 5 505 164 HOH HOH . K 7 HOH A 6 506 126 HOH HOH . K 7 HOH A 7 507 242 HOH HOH . K 7 HOH A 8 508 294 HOH HOH . K 7 HOH A 9 509 269 HOH HOH . K 7 HOH A 10 510 262 HOH HOH . K 7 HOH A 11 511 141 HOH HOH . K 7 HOH A 12 512 251 HOH HOH . K 7 HOH A 13 513 161 HOH HOH . K 7 HOH A 14 514 203 HOH HOH . K 7 HOH A 15 515 93 HOH HOH . K 7 HOH A 16 516 299 HOH HOH . K 7 HOH A 17 517 237 HOH HOH . K 7 HOH A 18 518 143 HOH HOH . K 7 HOH A 19 519 66 HOH HOH . K 7 HOH A 20 520 84 HOH HOH . K 7 HOH A 21 521 153 HOH HOH . K 7 HOH A 22 522 336 HOH HOH . K 7 HOH A 23 523 273 HOH HOH . K 7 HOH A 24 524 75 HOH HOH . K 7 HOH A 25 525 129 HOH HOH . K 7 HOH A 26 526 33 HOH HOH . K 7 HOH A 27 527 324 HOH HOH . K 7 HOH A 28 528 131 HOH HOH . K 7 HOH A 29 529 80 HOH HOH . K 7 HOH A 30 530 64 HOH HOH . K 7 HOH A 31 531 124 HOH HOH . K 7 HOH A 32 532 121 HOH HOH . K 7 HOH A 33 533 82 HOH HOH . K 7 HOH A 34 534 233 HOH HOH . K 7 HOH A 35 535 318 HOH HOH . K 7 HOH A 36 536 284 HOH HOH . K 7 HOH A 37 537 8 HOH HOH . K 7 HOH A 38 538 53 HOH HOH . K 7 HOH A 39 539 79 HOH HOH . K 7 HOH A 40 540 26 HOH HOH . K 7 HOH A 41 541 297 HOH HOH . K 7 HOH A 42 542 120 HOH HOH . K 7 HOH A 43 543 246 HOH HOH . K 7 HOH A 44 544 261 HOH HOH . K 7 HOH A 45 545 104 HOH HOH . K 7 HOH A 46 546 193 HOH HOH . K 7 HOH A 47 547 42 HOH HOH . K 7 HOH A 48 548 11 HOH HOH . K 7 HOH A 49 549 213 HOH HOH . K 7 HOH A 50 550 128 HOH HOH . K 7 HOH A 51 551 152 HOH HOH . K 7 HOH A 52 552 46 HOH HOH . K 7 HOH A 53 553 158 HOH HOH . K 7 HOH A 54 554 50 HOH HOH . K 7 HOH A 55 555 288 HOH HOH . K 7 HOH A 56 556 185 HOH HOH . K 7 HOH A 57 557 136 HOH HOH . K 7 HOH A 58 558 62 HOH HOH . K 7 HOH A 59 559 304 HOH HOH . K 7 HOH A 60 560 112 HOH HOH . K 7 HOH A 61 561 19 HOH HOH . K 7 HOH A 62 562 52 HOH HOH . K 7 HOH A 63 563 328 HOH HOH . K 7 HOH A 64 564 21 HOH HOH . K 7 HOH A 65 565 154 HOH HOH . K 7 HOH A 66 566 27 HOH HOH . K 7 HOH A 67 567 56 HOH HOH . K 7 HOH A 68 568 207 HOH HOH . K 7 HOH A 69 569 183 HOH HOH . K 7 HOH A 70 570 219 HOH HOH . K 7 HOH A 71 571 109 HOH HOH . K 7 HOH A 72 572 101 HOH HOH . K 7 HOH A 73 573 31 HOH HOH . K 7 HOH A 74 574 18 HOH HOH . K 7 HOH A 75 575 260 HOH HOH . K 7 HOH A 76 576 24 HOH HOH . K 7 HOH A 77 577 276 HOH HOH . K 7 HOH A 78 578 253 HOH HOH . K 7 HOH A 79 579 144 HOH HOH . K 7 HOH A 80 580 218 HOH HOH . K 7 HOH A 81 581 266 HOH HOH . K 7 HOH A 82 582 48 HOH HOH . K 7 HOH A 83 583 2 HOH HOH . K 7 HOH A 84 584 125 HOH HOH . K 7 HOH A 85 585 41 HOH HOH . K 7 HOH A 86 586 326 HOH HOH . K 7 HOH A 87 587 54 HOH HOH . K 7 HOH A 88 588 22 HOH HOH . K 7 HOH A 89 589 165 HOH HOH . K 7 HOH A 90 590 43 HOH HOH . K 7 HOH A 91 591 283 HOH HOH . K 7 HOH A 92 592 189 HOH HOH . K 7 HOH A 93 593 132 HOH HOH . K 7 HOH A 94 594 12 HOH HOH . K 7 HOH A 95 595 16 HOH HOH . K 7 HOH A 96 596 57 HOH HOH . K 7 HOH A 97 597 255 HOH HOH . K 7 HOH A 98 598 72 HOH HOH . K 7 HOH A 99 599 329 HOH HOH . K 7 HOH A 100 600 177 HOH HOH . K 7 HOH A 101 601 281 HOH HOH . K 7 HOH A 102 602 221 HOH HOH . K 7 HOH A 103 603 115 HOH HOH . K 7 HOH A 104 604 71 HOH HOH . K 7 HOH A 105 605 335 HOH HOH . K 7 HOH A 106 606 70 HOH HOH . K 7 HOH A 107 607 133 HOH HOH . K 7 HOH A 108 608 9 HOH HOH . K 7 HOH A 109 609 117 HOH HOH . K 7 HOH A 110 610 123 HOH HOH . K 7 HOH A 111 611 282 HOH HOH . K 7 HOH A 112 612 17 HOH HOH . K 7 HOH A 113 613 186 HOH HOH . K 7 HOH A 114 614 7 HOH HOH . K 7 HOH A 115 615 78 HOH HOH . K 7 HOH A 116 616 181 HOH HOH . K 7 HOH A 117 617 13 HOH HOH . K 7 HOH A 118 618 190 HOH HOH . K 7 HOH A 119 619 83 HOH HOH . K 7 HOH A 120 620 14 HOH HOH . K 7 HOH A 121 621 108 HOH HOH . K 7 HOH A 122 622 38 HOH HOH . K 7 HOH A 123 623 99 HOH HOH . K 7 HOH A 124 624 63 HOH HOH . K 7 HOH A 125 625 15 HOH HOH . K 7 HOH A 126 626 238 HOH HOH . K 7 HOH A 127 627 332 HOH HOH . K 7 HOH A 128 628 29 HOH HOH . K 7 HOH A 129 629 92 HOH HOH . K 7 HOH A 130 630 122 HOH HOH . K 7 HOH A 131 631 157 HOH HOH . K 7 HOH A 132 632 205 HOH HOH . K 7 HOH A 133 633 45 HOH HOH . K 7 HOH A 134 634 6 HOH HOH . K 7 HOH A 135 635 192 HOH HOH . K 7 HOH A 136 636 77 HOH HOH . K 7 HOH A 137 637 319 HOH HOH . K 7 HOH A 138 638 59 HOH HOH . K 7 HOH A 139 639 10 HOH HOH . K 7 HOH A 140 640 119 HOH HOH . K 7 HOH A 141 641 187 HOH HOH . K 7 HOH A 142 642 214 HOH HOH . K 7 HOH A 143 643 174 HOH HOH . K 7 HOH A 144 644 97 HOH HOH . K 7 HOH A 145 645 199 HOH HOH . K 7 HOH A 146 646 270 HOH HOH . K 7 HOH A 147 647 287 HOH HOH . K 7 HOH A 148 648 100 HOH HOH . K 7 HOH A 149 649 156 HOH HOH . K 7 HOH A 150 650 1 HOH HOH . K 7 HOH A 151 651 5 HOH HOH . K 7 HOH A 152 652 301 HOH HOH . K 7 HOH A 153 653 134 HOH HOH . K 7 HOH A 154 654 130 HOH HOH . K 7 HOH A 155 655 209 HOH HOH . K 7 HOH A 156 656 224 HOH HOH . K 7 HOH A 157 657 55 HOH HOH . K 7 HOH A 158 658 23 HOH HOH . K 7 HOH A 159 659 51 HOH HOH . K 7 HOH A 160 660 37 HOH HOH . K 7 HOH A 161 661 32 HOH HOH . K 7 HOH A 162 662 91 HOH HOH . K 7 HOH A 163 663 325 HOH HOH . K 7 HOH A 164 664 160 HOH HOH . K 7 HOH A 165 665 34 HOH HOH . K 7 HOH A 166 666 257 HOH HOH . K 7 HOH A 167 667 102 HOH HOH . K 7 HOH A 168 668 30 HOH HOH . K 7 HOH A 169 669 4 HOH HOH . K 7 HOH A 170 670 89 HOH HOH . K 7 HOH A 171 671 226 HOH HOH . K 7 HOH A 172 672 169 HOH HOH . K 7 HOH A 173 673 61 HOH HOH . K 7 HOH A 174 674 268 HOH HOH . K 7 HOH A 175 675 67 HOH HOH . K 7 HOH A 176 676 149 HOH HOH . K 7 HOH A 177 677 147 HOH HOH . K 7 HOH A 178 678 3 HOH HOH . K 7 HOH A 179 679 20 HOH HOH . K 7 HOH A 180 680 285 HOH HOH . K 7 HOH A 181 681 87 HOH HOH . K 7 HOH A 182 682 103 HOH HOH . K 7 HOH A 183 683 202 HOH HOH . K 7 HOH A 184 684 28 HOH HOH . K 7 HOH A 185 685 309 HOH HOH . K 7 HOH A 186 686 298 HOH HOH . K 7 HOH A 187 687 74 HOH HOH . K 7 HOH A 188 688 60 HOH HOH . K 7 HOH A 189 689 69 HOH HOH . K 7 HOH A 190 690 138 HOH HOH . K 7 HOH A 191 691 150 HOH HOH . K 7 HOH A 192 692 236 HOH HOH . K 7 HOH A 193 693 232 HOH HOH . K 7 HOH A 194 694 148 HOH HOH . K 7 HOH A 195 695 118 HOH HOH . K 7 HOH A 196 696 107 HOH HOH . K 7 HOH A 197 697 244 HOH HOH . K 7 HOH A 198 698 98 HOH HOH . K 7 HOH A 199 699 35 HOH HOH . K 7 HOH A 200 700 114 HOH HOH . K 7 HOH A 201 701 113 HOH HOH . K 7 HOH A 202 702 195 HOH HOH . K 7 HOH A 203 703 194 HOH HOH . K 7 HOH A 204 704 139 HOH HOH . K 7 HOH A 205 705 220 HOH HOH . K 7 HOH A 206 706 49 HOH HOH . K 7 HOH A 207 707 145 HOH HOH . K 7 HOH A 208 708 208 HOH HOH . K 7 HOH A 209 709 39 HOH HOH . K 7 HOH A 210 710 196 HOH HOH . K 7 HOH A 211 711 215 HOH HOH . K 7 HOH A 212 712 198 HOH HOH . K 7 HOH A 213 713 47 HOH HOH . K 7 HOH A 214 714 95 HOH HOH . K 7 HOH A 215 715 111 HOH HOH . K 7 HOH A 216 716 86 HOH HOH . K 7 HOH A 217 717 176 HOH HOH . K 7 HOH A 218 718 280 HOH HOH . K 7 HOH A 219 719 201 HOH HOH . K 7 HOH A 220 720 76 HOH HOH . K 7 HOH A 221 721 167 HOH HOH . K 7 HOH A 222 722 85 HOH HOH . K 7 HOH A 223 723 314 HOH HOH . K 7 HOH A 224 724 290 HOH HOH . K 7 HOH A 225 725 180 HOH HOH . K 7 HOH A 226 726 155 HOH HOH . K 7 HOH A 227 727 168 HOH HOH . K 7 HOH A 228 728 58 HOH HOH . K 7 HOH A 229 729 240 HOH HOH . K 7 HOH A 230 730 81 HOH HOH . K 7 HOH A 231 731 96 HOH HOH . K 7 HOH A 232 732 25 HOH HOH . K 7 HOH A 233 733 306 HOH HOH . K 7 HOH A 234 734 191 HOH HOH . K 7 HOH A 235 735 106 HOH HOH . K 7 HOH A 236 736 127 HOH HOH . K 7 HOH A 237 737 40 HOH HOH . K 7 HOH A 238 738 135 HOH HOH . K 7 HOH A 239 739 140 HOH HOH . K 7 HOH A 240 740 151 HOH HOH . K 7 HOH A 241 741 73 HOH HOH . K 7 HOH A 242 742 210 HOH HOH . K 7 HOH A 243 743 239 HOH HOH . K 7 HOH A 244 744 265 HOH HOH . K 7 HOH A 245 745 274 HOH HOH . K 7 HOH A 246 746 275 HOH HOH . K 7 HOH A 247 747 163 HOH HOH . K 7 HOH A 248 748 68 HOH HOH . K 7 HOH A 249 749 243 HOH HOH . K 7 HOH A 250 750 110 HOH HOH . K 7 HOH A 251 751 173 HOH HOH . K 7 HOH A 252 752 197 HOH HOH . K 7 HOH A 253 753 146 HOH HOH . K 7 HOH A 254 754 267 HOH HOH . K 7 HOH A 255 755 182 HOH HOH . K 7 HOH A 256 756 322 HOH HOH . K 7 HOH A 257 757 312 HOH HOH . K 7 HOH A 258 758 289 HOH HOH . K 7 HOH A 259 759 179 HOH HOH . K 7 HOH A 260 760 170 HOH HOH . K 7 HOH A 261 761 227 HOH HOH . K 7 HOH A 262 762 323 HOH HOH . K 7 HOH A 263 763 305 HOH HOH . K 7 HOH A 264 764 327 HOH HOH . K 7 HOH A 265 765 279 HOH HOH . K 7 HOH A 266 766 175 HOH HOH . K 7 HOH A 267 767 317 HOH HOH . K 7 HOH A 268 768 142 HOH HOH . K 7 HOH A 269 769 263 HOH HOH . K 7 HOH A 270 770 291 HOH HOH . K 7 HOH A 271 771 241 HOH HOH . K 7 HOH A 272 772 330 HOH HOH . K 7 HOH A 273 773 162 HOH HOH . K 7 HOH A 274 774 116 HOH HOH . K 7 HOH A 275 775 65 HOH HOH . K 7 HOH A 276 776 231 HOH HOH . K 7 HOH A 277 777 188 HOH HOH . K 7 HOH A 278 778 88 HOH HOH . K 7 HOH A 279 779 200 HOH HOH . K 7 HOH A 280 780 90 HOH HOH . K 7 HOH A 281 781 303 HOH HOH . K 7 HOH A 282 782 222 HOH HOH . K 7 HOH A 283 783 225 HOH HOH . K 7 HOH A 284 784 159 HOH HOH . K 7 HOH A 285 785 171 HOH HOH . K 7 HOH A 286 786 333 HOH HOH . K 7 HOH A 287 787 223 HOH HOH . K 7 HOH A 288 788 254 HOH HOH . K 7 HOH A 289 789 277 HOH HOH . K 7 HOH A 290 790 320 HOH HOH . K 7 HOH A 291 791 36 HOH HOH . K 7 HOH A 292 792 256 HOH HOH . K 7 HOH A 293 793 272 HOH HOH . K 7 HOH A 294 794 334 HOH HOH . K 7 HOH A 295 795 259 HOH HOH . K 7 HOH A 296 796 228 HOH HOH . K 7 HOH A 297 797 321 HOH HOH . K 7 HOH A 298 798 293 HOH HOH . K 7 HOH A 299 799 264 HOH HOH . K 7 HOH A 300 800 315 HOH HOH . K 7 HOH A 301 801 302 HOH HOH . K 7 HOH A 302 802 300 HOH HOH . K 7 HOH A 303 803 105 HOH HOH . K 7 HOH A 304 804 278 HOH HOH . K 7 HOH A 305 805 94 HOH HOH . K 7 HOH A 306 806 247 HOH HOH . K 7 HOH A 307 807 178 HOH HOH . K 7 HOH A 308 808 245 HOH HOH . K 7 HOH A 309 809 184 HOH HOH . K 7 HOH A 310 810 295 HOH HOH . K 7 HOH A 311 811 258 HOH HOH . K 7 HOH A 312 812 44 HOH HOH . K 7 HOH A 313 813 313 HOH HOH . K 7 HOH A 314 814 252 HOH HOH . K 7 HOH A 315 815 249 HOH HOH . K 7 HOH A 316 816 316 HOH HOH . K 7 HOH A 317 817 229 HOH HOH . K 7 HOH A 318 818 308 HOH HOH . K 7 HOH A 319 819 250 HOH HOH . K 7 HOH A 320 820 216 HOH HOH . K 7 HOH A 321 821 211 HOH HOH . K 7 HOH A 322 822 286 HOH HOH . K 7 HOH A 323 823 172 HOH HOH . K 7 HOH A 324 824 331 HOH HOH . K 7 HOH A 325 825 248 HOH HOH . K 7 HOH A 326 826 166 HOH HOH . K 7 HOH A 327 827 137 HOH HOH . K 7 HOH A 328 828 296 HOH HOH . K 7 HOH A 329 829 271 HOH HOH . K 7 HOH A 330 830 230 HOH HOH . K 7 HOH A 331 831 307 HOH HOH . K 7 HOH A 332 832 311 HOH HOH . K 7 HOH A 333 833 217 HOH HOH . K 7 HOH A 334 834 204 HOH HOH . K 7 HOH A 335 835 292 HOH HOH . K 7 HOH A 336 836 212 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . A . D 4 3.447 120.312 145.484 0.6 28.62 ? PB GDP 401 A 1 HETATM 2 P PB GDP . B . D 4 2.451 120.461 145.36 0.4 23.5 ? PB GDP 401 A 1 HETATM 3 O O1B GDP . A . D 4 3.119 119.213 144.413 0.6 33.15 ? O1B GDP 401 A 1 HETATM 4 O O1B GDP . B . D 4 3.061 119.283 144.487 0.4 26.62 ? O1B GDP 401 A 1 HETATM 5 O O2B GDP . A . D 4 2.533 120.116 146.698 0.6 20.96 ? O2B GDP 401 A 1 HETATM 6 O O2B GDP . B . D 4 2.72 120.168 146.815 0.4 64.91 ? O2B GDP 401 A 1 HETATM 7 O O3B GDP . A . D 4 4.837 120.244 145.882 0.6 48.91 ? O3B GDP 401 A 1 HETATM 8 O O3B GDP . B . D 4 0.997 120.551 145.138 0.4 22.6 ? O3B GDP 401 A 1 HETATM 9 O O3A GDP . A . D 4 3.216 121.684 144.899 0.6 20.6 ? O3A GDP 401 A 1 HETATM 10 O O3A GDP . B . D 4 3.094 121.852 144.903 0.4 58.69 ? O3A GDP 401 A 1 HETATM 11 P PA GDP . A . D 4 4.248 122.766 144.499 0.6 28.46 ? PA GDP 401 A 1 HETATM 12 P PA GDP . B . D 4 4.529 122.27 144.778 0.4 23.09 ? PA GDP 401 A 1 HETATM 13 O O1A GDP . A . D 4 3.455 123.973 143.974 0.6 39.19 ? O1A GDP 401 A 1 HETATM 14 O O1A GDP . B . D 4 5.376 121.147 145.492 0.4 22.05 ? O1A GDP 401 A 1 HETATM 15 O O2A GDP . A . D 4 5.004 123.176 145.564 0.6 23.32 ? O2A GDP 401 A 1 HETATM 16 O O2A GDP . B . D 4 4.764 123.481 145.391 0.4 38.25 ? O2A GDP 401 A 1 HETATM 17 O O5' GDP . A . D 4 5.154 122.236 143.358 0.6 38.28 ? O5' GDP 401 A 1 HETATM 18 O O5' GDP . B . D 4 4.947 122.356 143.279 0.4 18.06 ? O5' GDP 401 A 1 HETATM 19 C C5' GDP . A . D 4 4.713 121.388 142.325 0.6 30.35 ? C5' GDP 401 A 1 HETATM 20 C C5' GDP . B . D 4 4.711 121.34 142.33 0.4 26.97 ? C5' GDP 401 A 1 HETATM 21 C C4' GDP . A . D 4 5.796 121.309 141.267 0.6 19.47 ? C4' GDP 401 A 1 HETATM 22 C C4' GDP . B . D 4 5.8 121.306 141.273 0.4 42.27 ? C4' GDP 401 A 1 HETATM 23 O O4' GDP . A . D 4 5.927 122.584 140.707 0.6 24.79 ? O4' GDP 401 A 1 HETATM 24 O O4' GDP . B . D 4 5.922 122.584 140.716 0.4 27.8 ? O4' GDP 401 A 1 HETATM 25 C C3' GDP . A . D 4 7.15 120.91 141.855 0.6 20.51 ? C3' GDP 401 A 1 HETATM 26 C C3' GDP . B . D 4 7.156 120.909 141.858 0.4 35.8 ? C3' GDP 401 A 1 HETATM 27 O O3' GDP . A . D 4 7.914 120.267 140.857 0.6 36.89 ? O3' GDP 401 A 1 HETATM 28 O O3' GDP . B . D 4 7.915 120.267 140.857 0.4 18.87 ? O3' GDP 401 A 1 HETATM 29 C C2' GDP . A . D 4 7.776 122.264 142.165 0.6 25.94 ? C2' GDP 401 A 1 HETATM 30 C C2' GDP . B . D 4 7.778 122.265 142.164 0.4 28.14 ? C2' GDP 401 A 1 HETATM 31 O O2' GDP . A . D 4 9.19 122.212 142.128 0.6 30.81 ? O2' GDP 401 A 1 HETATM 32 O O2' GDP . B . D 4 9.192 122.213 142.127 0.4 23.03 ? O2' GDP 401 A 1 HETATM 33 C C1' GDP . A . D 4 7.175 123.117 141.033 0.6 20.27 ? C1' GDP 401 A 1 HETATM 34 C C1' GDP . B . D 4 7.174 123.117 141.033 0.4 42.5 ? C1' GDP 401 A 1 HETATM 35 N N9 GDP . A . D 4 7.111 124.526 141.437 0.6 52.22 ? N9 GDP 401 A 1 HETATM 36 N N9 GDP . B . D 4 7.111 124.526 141.436 0.4 16.4 ? N9 GDP 401 A 1 HETATM 37 C C8 GDP . A . D 4 6.995 125.044 142.671 0.6 25.74 ? C8 GDP 401 A 1 HETATM 38 C C8 GDP . B . D 4 6.995 125.044 142.671 0.4 37.03 ? C8 GDP 401 A 1 HETATM 39 N N7 GDP . A . D 4 7.022 126.304 142.604 0.6 22.39 ? N7 GDP 401 A 1 HETATM 40 N N7 GDP . B . D 4 7.022 126.304 142.604 0.4 40.65 ? N7 GDP 401 A 1 HETATM 41 C C5 GDP . A . D 4 7.168 126.681 141.348 0.6 19.91 ? C5 GDP 401 A 1 HETATM 42 C C5 GDP . B . D 4 7.168 126.681 141.348 0.4 39.19 ? C5 GDP 401 A 1 HETATM 43 C C6 GDP . A . D 4 7.302 127.895 140.682 0.6 43.96 ? C6 GDP 401 A 1 HETATM 44 C C6 GDP . B . D 4 7.303 127.895 140.682 0.4 21.37 ? C6 GDP 401 A 1 HETATM 45 O O6 GDP . A . D 4 7.308 128.947 141.261 0.6 58.57 ? O6 GDP 401 A 1 HETATM 46 O O6 GDP . B . D 4 7.309 128.947 141.261 0.4 19.24 ? O6 GDP 401 A 1 HETATM 47 N N1 GDP . A . D 4 7.445 127.852 139.368 0.6 24.83 ? N1 GDP 401 A 1 HETATM 48 N N1 GDP . B . D 4 7.446 127.852 139.368 0.4 30.01 ? N1 GDP 401 A 1 HETATM 49 C C2 GDP . A . D 4 7.468 126.691 138.695 0.6 42.35 ? C2 GDP 401 A 1 HETATM 50 C C2 GDP . B . D 4 7.468 126.691 138.695 0.4 20.02 ? C2 GDP 401 A 1 HETATM 51 N N2 GDP . A . D 4 7.601 126.743 137.366 0.6 28.8 ? N2 GDP 401 A 1 HETATM 52 N N2 GDP . B . D 4 7.601 126.743 137.366 0.4 37.14 ? N2 GDP 401 A 1 HETATM 53 N N3 GDP . A . D 4 7.357 125.559 139.3 0.6 27.98 ? N3 GDP 401 A 1 HETATM 54 N N3 GDP . B . D 4 7.357 125.559 139.3 0.4 31.57 ? N3 GDP 401 A 1 HETATM 55 C C4 GDP . A . D 4 7.224 125.531 140.591 0.6 29.16 ? C4 GDP 401 A 1 HETATM 56 C C4 GDP . B . D 4 7.224 125.531 140.591 0.4 21.11 ? C4 GDP 401 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 63 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 911 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 56 #