data_8D3I # _model_server_result.job_id xbkf-wY2Q6ThS7uEDOZpew _model_server_result.datetime_utc '2024-11-28 17:33:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d3i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":701}' # _entry.id 8D3I # _exptl.entry_id 8D3I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 144.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description quinolin-4-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8D3I _cell.length_a 91.062 _cell.length_b 114.973 _cell.length_c 122.032 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D3I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C LYS 179 B LYS 255 1_555 B N CSX 180 B CSX 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 B C CSX 180 B CSX 256 1_555 B N LEU 181 B LEU 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C9 H8 N2' _chem_comp.formula_weight 144.173 _chem_comp.id 1LM _chem_comp.mon_nstd_flag . _chem_comp.name quinolin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C06 1LM doub 1 n y C01 C02 1LM sing 2 n y C06 C05 1LM sing 3 n y C02 C03 1LM doub 4 n y N11 C07 1LM sing 5 n n C05 C07 1LM doub 6 n y C05 C04 1LM sing 7 n y C07 C08 1LM sing 8 n y C03 C04 1LM sing 9 n y C04 N10 1LM doub 10 n y C08 C09 1LM doub 11 n y N10 C09 1LM sing 12 n y C01 H1 1LM sing 13 n n C02 H2 1LM sing 14 n n C03 H3 1LM sing 15 n n C06 H4 1LM sing 16 n n C08 H5 1LM sing 17 n n C09 H6 1LM sing 18 n n N11 H7 1LM sing 19 n n N11 H8 1LM sing 20 n n # _atom_sites.entry_id 8D3I _atom_sites.fract_transf_matrix[1][1] 0.010982 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1LM A 1 701 702 1LM LIG . D 4 EDO A 1 702 703 EDO EDO . E 5 FAD A 1 703 5 FAD FAD . F 6 SO4 A 1 704 2 SO4 SO4 . G 6 SO4 A 1 705 3 SO4 SO4 . H 3 1LM B 1 701 701 1LM LIG . I 5 FAD B 1 702 4 FAD FAD . J 6 SO4 B 1 703 1 SO4 SO4 . K 7 HOH A 1 801 64 HOH HOH . K 7 HOH A 2 802 59 HOH HOH . K 7 HOH A 3 803 53 HOH HOH . K 7 HOH A 4 804 11 HOH HOH . K 7 HOH A 5 805 19 HOH HOH . K 7 HOH A 6 806 52 HOH HOH . K 7 HOH A 7 807 61 HOH HOH . K 7 HOH A 8 808 4 HOH HOH . K 7 HOH A 9 809 42 HOH HOH . K 7 HOH A 10 810 41 HOH HOH . K 7 HOH A 11 811 51 HOH HOH . K 7 HOH A 12 812 45 HOH HOH . K 7 HOH A 13 813 60 HOH HOH . K 7 HOH A 14 814 22 HOH HOH . K 7 HOH A 15 815 54 HOH HOH . K 7 HOH A 16 816 56 HOH HOH . K 7 HOH A 17 817 28 HOH HOH . K 7 HOH A 18 818 65 HOH HOH . K 7 HOH A 19 819 27 HOH HOH . K 7 HOH A 20 820 30 HOH HOH . K 7 HOH A 21 821 26 HOH HOH . K 7 HOH A 22 822 25 HOH HOH . K 7 HOH A 23 823 57 HOH HOH . K 7 HOH A 24 824 3 HOH HOH . K 7 HOH A 25 825 16 HOH HOH . K 7 HOH A 26 826 35 HOH HOH . K 7 HOH A 27 827 43 HOH HOH . K 7 HOH A 28 828 46 HOH HOH . K 7 HOH A 29 829 55 HOH HOH . L 7 HOH B 1 801 14 HOH HOH . L 7 HOH B 2 802 9 HOH HOH . L 7 HOH B 3 803 37 HOH HOH . L 7 HOH B 4 804 47 HOH HOH . L 7 HOH B 5 805 24 HOH HOH . L 7 HOH B 6 806 7 HOH HOH . L 7 HOH B 7 807 62 HOH HOH . L 7 HOH B 8 808 38 HOH HOH . L 7 HOH B 9 809 23 HOH HOH . L 7 HOH B 10 810 50 HOH HOH . L 7 HOH B 11 811 10 HOH HOH . L 7 HOH B 12 812 48 HOH HOH . L 7 HOH B 13 813 34 HOH HOH . L 7 HOH B 14 814 66 HOH HOH . L 7 HOH B 15 815 63 HOH HOH . L 7 HOH B 16 816 49 HOH HOH . L 7 HOH B 17 817 36 HOH HOH . L 7 HOH B 18 818 44 HOH HOH . L 7 HOH B 19 819 29 HOH HOH . L 7 HOH B 20 820 32 HOH HOH . L 7 HOH B 21 821 17 HOH HOH . L 7 HOH B 22 822 39 HOH HOH . L 7 HOH B 23 823 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 1LM . . . H 3 -3.889 -6.331 18.893 1 51.2 ? C01 1LM 701 B 1 HETATM 2 C C02 1LM . . . H 3 -2.795 -5.841 19.625 1 52.92 ? C02 1LM 701 B 1 HETATM 3 C C03 1LM . . . H 3 -1.63 -5.472 18.977 1 54.31 ? C03 1LM 701 B 1 HETATM 4 C C04 1LM . . . H 3 -1.577 -5.606 17.534 1 52.57 ? C04 1LM 701 B 1 HETATM 5 C C05 1LM . . . H 3 -2.64 -6.081 16.83 1 52.24 ? C05 1LM 701 B 1 HETATM 6 C C06 1LM . . . H 3 -3.838 -6.457 17.525 1 51.12 ? C06 1LM 701 B 1 HETATM 7 C C07 1LM . . . H 3 -2.543 -6.197 15.384 1 54.35 ? C07 1LM 701 B 1 HETATM 8 C C08 1LM . . . H 3 -1.352 -5.806 14.827 1 54.57 ? C08 1LM 701 B 1 HETATM 9 C C09 1LM . . . H 3 -0.289 -5.321 15.634 1 53.5 ? C09 1LM 701 B 1 HETATM 10 N N10 1LM . . . H 3 -0.36 -5.206 16.972 1 52.63 ? N10 1LM 701 B 1 HETATM 11 N N11 1LM . . . H 3 -3.601 -6.68 14.596 1 51.93 ? N11 1LM 701 B 1 HETATM 12 H H1 1LM . . . H 3 -4.805 -6.619 19.428 1 61.44 ? H1 1LM 701 B 1 HETATM 13 H H2 1LM . . . H 3 -2.864 -5.752 20.711 1 63.51 ? H2 1LM 701 B 1 HETATM 14 H H3 1LM . . . H 3 -0.809 -5.103 19.553 1 65.17 ? H3 1LM 701 B 1 HETATM 15 H H4 1LM . . . H 3 -4.683 -6.83 16.995 1 61.34 ? H4 1LM 701 B 1 HETATM 16 H H5 1LM . . . H 3 -1.143 -5.842 13.74 1 65.48 ? H5 1LM 701 B 1 HETATM 17 H H6 1LM . . . H 3 0.671 -5.005 15.208 1 64.2 ? H6 1LM 701 B 1 HETATM 18 H H7 1LM . . . H 3 -3.672 -6.511 13.625 1 62.31 ? H7 1LM 701 B 1 HETATM 19 H H8 1LM . . . H 3 -4.329 -7.222 14.999 1 62.31 ? H8 1LM 701 B 1 # _model_server_stats.io_time_ms 149 _model_server_stats.parse_time_ms 173 _model_server_stats.create_model_time_ms 75 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #