data_8D3I # _model_server_result.job_id 7kc5juPIWtt_GErX-DsRKw _model_server_result.datetime_utc '2024-11-06 01:45:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d3i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":705}' # _entry.id 8D3I # _exptl.entry_id 8D3I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8D3I _cell.length_a 91.062 _cell.length_b 114.973 _cell.length_c 122.032 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D3I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C LYS 179 B LYS 255 1_555 B N CSX 180 B CSX 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 B C CSX 180 B CSX 256 1_555 B N LEU 181 B LEU 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 424 n n S O2 SO4 doub 425 n n S O3 SO4 sing 426 n n S O4 SO4 sing 427 n n # _atom_sites.entry_id 8D3I _atom_sites.fract_transf_matrix[1][1] 0.010982 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1LM A 1 701 702 1LM LIG . D 4 EDO A 1 702 703 EDO EDO . E 5 FAD A 1 703 5 FAD FAD . F 6 SO4 A 1 704 2 SO4 SO4 . G 6 SO4 A 1 705 3 SO4 SO4 . H 3 1LM B 1 701 701 1LM LIG . I 5 FAD B 1 702 4 FAD FAD . J 6 SO4 B 1 703 1 SO4 SO4 . K 7 HOH A 1 801 64 HOH HOH . K 7 HOH A 2 802 59 HOH HOH . K 7 HOH A 3 803 53 HOH HOH . K 7 HOH A 4 804 11 HOH HOH . K 7 HOH A 5 805 19 HOH HOH . K 7 HOH A 6 806 52 HOH HOH . K 7 HOH A 7 807 61 HOH HOH . K 7 HOH A 8 808 4 HOH HOH . K 7 HOH A 9 809 42 HOH HOH . K 7 HOH A 10 810 41 HOH HOH . K 7 HOH A 11 811 51 HOH HOH . K 7 HOH A 12 812 45 HOH HOH . K 7 HOH A 13 813 60 HOH HOH . K 7 HOH A 14 814 22 HOH HOH . K 7 HOH A 15 815 54 HOH HOH . K 7 HOH A 16 816 56 HOH HOH . K 7 HOH A 17 817 28 HOH HOH . K 7 HOH A 18 818 65 HOH HOH . K 7 HOH A 19 819 27 HOH HOH . K 7 HOH A 20 820 30 HOH HOH . K 7 HOH A 21 821 26 HOH HOH . K 7 HOH A 22 822 25 HOH HOH . K 7 HOH A 23 823 57 HOH HOH . K 7 HOH A 24 824 3 HOH HOH . K 7 HOH A 25 825 16 HOH HOH . K 7 HOH A 26 826 35 HOH HOH . K 7 HOH A 27 827 43 HOH HOH . K 7 HOH A 28 828 46 HOH HOH . K 7 HOH A 29 829 55 HOH HOH . L 7 HOH B 1 801 14 HOH HOH . L 7 HOH B 2 802 9 HOH HOH . L 7 HOH B 3 803 37 HOH HOH . L 7 HOH B 4 804 47 HOH HOH . L 7 HOH B 5 805 24 HOH HOH . L 7 HOH B 6 806 7 HOH HOH . L 7 HOH B 7 807 62 HOH HOH . L 7 HOH B 8 808 38 HOH HOH . L 7 HOH B 9 809 23 HOH HOH . L 7 HOH B 10 810 50 HOH HOH . L 7 HOH B 11 811 10 HOH HOH . L 7 HOH B 12 812 48 HOH HOH . L 7 HOH B 13 813 34 HOH HOH . L 7 HOH B 14 814 66 HOH HOH . L 7 HOH B 15 815 63 HOH HOH . L 7 HOH B 16 816 49 HOH HOH . L 7 HOH B 17 817 36 HOH HOH . L 7 HOH B 18 818 44 HOH HOH . L 7 HOH B 19 819 29 HOH HOH . L 7 HOH B 20 820 32 HOH HOH . L 7 HOH B 21 821 17 HOH HOH . L 7 HOH B 22 822 39 HOH HOH . L 7 HOH B 23 823 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 6 42.903 6.669 42.67 1 99.53 ? S SO4 705 A 1 HETATM 2 O O1 SO4 . . . G 6 42.161 6.265 41.478 1 74.54 ? O1 SO4 705 A 1 HETATM 3 O O2 SO4 . . . G 6 43.332 8.059 42.531 1 88.81 ? O2 SO4 705 A 1 HETATM 4 O O3 SO4 . . . G 6 42.042 6.537 43.842 1 70 ? O3 SO4 705 A 1 HETATM 5 O O4 SO4 . . . G 6 44.077 5.815 42.832 1 101.98 ? O4 SO4 705 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #