data_8D3K # _model_server_result.job_id vFrUIrXjvRj7hCmt7pUdyQ _model_server_result.datetime_utc '2025-06-23 16:46:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d3k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":704}' # _entry.id 8D3K # _exptl.entry_id 8D3K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8D3K _cell.length_a 91.389 _cell.length_b 115.024 _cell.length_c 124.121 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D3K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,M 1 1 B,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 K N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 179 A LYS 255 1_555 A N CSX 180 A CSX 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C CSX 180 A CSX 256 1_555 A N LEU 181 A LEU 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C ALA 364 A ALA 440 1_555 A N CSX 365 A CSX 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C CSX 365 A CSX 441 1_555 A N PHE 366 A PHE 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 B C ALA 364 B ALA 440 1_555 B N CSX 365 B CSX 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 B C CSX 365 B CSX 441 1_555 B N PHE 366 B PHE 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 427 n n S O2 SO4 doub 428 n n S O3 SO4 sing 429 n n S O4 SO4 sing 430 n n # _atom_sites.entry_id 8D3K _atom_sites.fract_transf_matrix[1][1] 0.010942 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008694 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008057 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 QC6 A 1 701 701 QC6 C11 . D 4 EDO A 1 702 801 EDO EDO . E 5 FAD A 1 703 3 FAD FAD . F 6 SO4 A 1 704 4 SO4 SO4 . G 6 SO4 A 1 705 6 SO4 SO4 . H 6 SO4 A 1 706 7 SO4 SO4 . I 3 QC6 B 1 701 701 QC6 C11 . J 5 FAD B 1 702 4 FAD FAD . K 6 SO4 B 1 703 5 SO4 SO4 . L 6 SO4 B 1 704 8 SO4 SO4 . M 7 HOH A 1 801 238 HOH HOH . M 7 HOH A 2 802 292 HOH HOH . M 7 HOH A 3 803 161 HOH HOH . M 7 HOH A 4 804 80 HOH HOH . M 7 HOH A 5 805 5 HOH HOH . M 7 HOH A 6 806 271 HOH HOH . M 7 HOH A 7 807 149 HOH HOH . M 7 HOH A 8 808 13 HOH HOH . M 7 HOH A 9 809 110 HOH HOH . M 7 HOH A 10 810 265 HOH HOH . M 7 HOH A 11 811 76 HOH HOH . M 7 HOH A 12 812 277 HOH HOH . M 7 HOH A 13 813 24 HOH HOH . M 7 HOH A 14 814 272 HOH HOH . M 7 HOH A 15 815 77 HOH HOH . M 7 HOH A 16 816 168 HOH HOH . M 7 HOH A 17 817 128 HOH HOH . M 7 HOH A 18 818 27 HOH HOH . M 7 HOH A 19 819 244 HOH HOH . M 7 HOH A 20 820 261 HOH HOH . M 7 HOH A 21 821 248 HOH HOH . M 7 HOH A 22 822 218 HOH HOH . M 7 HOH A 23 823 6 HOH HOH . M 7 HOH A 24 824 87 HOH HOH . M 7 HOH A 25 825 48 HOH HOH . M 7 HOH A 26 826 278 HOH HOH . M 7 HOH A 27 827 19 HOH HOH . M 7 HOH A 28 828 268 HOH HOH . M 7 HOH A 29 829 237 HOH HOH . M 7 HOH A 30 830 150 HOH HOH . M 7 HOH A 31 831 176 HOH HOH . M 7 HOH A 32 832 33 HOH HOH . M 7 HOH A 33 833 54 HOH HOH . M 7 HOH A 34 834 69 HOH HOH . M 7 HOH A 35 835 174 HOH HOH . M 7 HOH A 36 836 253 HOH HOH . M 7 HOH A 37 837 294 HOH HOH . M 7 HOH A 38 838 135 HOH HOH . M 7 HOH A 39 839 148 HOH HOH . M 7 HOH A 40 840 234 HOH HOH . M 7 HOH A 41 841 221 HOH HOH . M 7 HOH A 42 842 143 HOH HOH . M 7 HOH A 43 843 37 HOH HOH . M 7 HOH A 44 844 157 HOH HOH . M 7 HOH A 45 845 216 HOH HOH . M 7 HOH A 46 846 38 HOH HOH . M 7 HOH A 47 847 109 HOH HOH . M 7 HOH A 48 848 78 HOH HOH . M 7 HOH A 49 849 165 HOH HOH . M 7 HOH A 50 850 72 HOH HOH . M 7 HOH A 51 851 53 HOH HOH . M 7 HOH A 52 852 136 HOH HOH . M 7 HOH A 53 853 84 HOH HOH . M 7 HOH A 54 854 88 HOH HOH . M 7 HOH A 55 855 108 HOH HOH . M 7 HOH A 56 856 17 HOH HOH . M 7 HOH A 57 857 195 HOH HOH . M 7 HOH A 58 858 154 HOH HOH . M 7 HOH A 59 859 20 HOH HOH . M 7 HOH A 60 860 120 HOH HOH . M 7 HOH A 61 861 180 HOH HOH . M 7 HOH A 62 862 201 HOH HOH . M 7 HOH A 63 863 57 HOH HOH . M 7 HOH A 64 864 118 HOH HOH . M 7 HOH A 65 865 222 HOH HOH . M 7 HOH A 66 866 62 HOH HOH . M 7 HOH A 67 867 252 HOH HOH . M 7 HOH A 68 868 35 HOH HOH . M 7 HOH A 69 869 30 HOH HOH . M 7 HOH A 70 870 293 HOH HOH . M 7 HOH A 71 871 196 HOH HOH . M 7 HOH A 72 872 188 HOH HOH . M 7 HOH A 73 873 266 HOH HOH . M 7 HOH A 74 874 276 HOH HOH . M 7 HOH A 75 875 219 HOH HOH . M 7 HOH A 76 876 123 HOH HOH . M 7 HOH A 77 877 207 HOH HOH . M 7 HOH A 78 878 4 HOH HOH . M 7 HOH A 79 879 159 HOH HOH . M 7 HOH A 80 880 166 HOH HOH . M 7 HOH A 81 881 209 HOH HOH . M 7 HOH A 82 882 239 HOH HOH . M 7 HOH A 83 883 29 HOH HOH . M 7 HOH A 84 884 68 HOH HOH . M 7 HOH A 85 885 283 HOH HOH . M 7 HOH A 86 886 14 HOH HOH . M 7 HOH A 87 887 45 HOH HOH . M 7 HOH A 88 888 215 HOH HOH . M 7 HOH A 89 889 23 HOH HOH . M 7 HOH A 90 890 190 HOH HOH . M 7 HOH A 91 891 32 HOH HOH . M 7 HOH A 92 892 226 HOH HOH . M 7 HOH A 93 893 42 HOH HOH . M 7 HOH A 94 894 167 HOH HOH . M 7 HOH A 95 895 122 HOH HOH . M 7 HOH A 96 896 177 HOH HOH . M 7 HOH A 97 897 249 HOH HOH . M 7 HOH A 98 898 34 HOH HOH . M 7 HOH A 99 899 169 HOH HOH . M 7 HOH A 100 900 202 HOH HOH . M 7 HOH A 101 901 9 HOH HOH . M 7 HOH A 102 902 71 HOH HOH . M 7 HOH A 103 903 22 HOH HOH . M 7 HOH A 104 904 208 HOH HOH . M 7 HOH A 105 905 191 HOH HOH . M 7 HOH A 106 906 193 HOH HOH . M 7 HOH A 107 907 241 HOH HOH . M 7 HOH A 108 908 155 HOH HOH . M 7 HOH A 109 909 133 HOH HOH . M 7 HOH A 110 910 12 HOH HOH . M 7 HOH A 111 911 214 HOH HOH . M 7 HOH A 112 912 297 HOH HOH . M 7 HOH A 113 913 284 HOH HOH . M 7 HOH A 114 914 280 HOH HOH . M 7 HOH A 115 915 91 HOH HOH . M 7 HOH A 116 916 189 HOH HOH . M 7 HOH A 117 917 264 HOH HOH . M 7 HOH A 118 918 224 HOH HOH . M 7 HOH A 119 919 129 HOH HOH . M 7 HOH A 120 920 212 HOH HOH . M 7 HOH A 121 921 291 HOH HOH . M 7 HOH A 122 922 220 HOH HOH . M 7 HOH A 123 923 217 HOH HOH . M 7 HOH A 124 924 225 HOH HOH . M 7 HOH A 125 925 182 HOH HOH . M 7 HOH A 126 926 245 HOH HOH . M 7 HOH A 127 927 200 HOH HOH . M 7 HOH A 128 928 281 HOH HOH . M 7 HOH A 129 929 183 HOH HOH . M 7 HOH A 130 930 199 HOH HOH . M 7 HOH A 131 931 213 HOH HOH . M 7 HOH A 132 932 228 HOH HOH . M 7 HOH A 133 933 275 HOH HOH . M 7 HOH A 134 934 296 HOH HOH . M 7 HOH A 135 935 254 HOH HOH . M 7 HOH A 136 936 223 HOH HOH . M 7 HOH A 137 937 279 HOH HOH . M 7 HOH A 138 938 229 HOH HOH . N 7 HOH B 1 801 287 HOH HOH . N 7 HOH B 2 802 298 HOH HOH . N 7 HOH B 3 803 194 HOH HOH . N 7 HOH B 4 804 164 HOH HOH . N 7 HOH B 5 805 56 HOH HOH . N 7 HOH B 6 806 269 HOH HOH . N 7 HOH B 7 807 179 HOH HOH . N 7 HOH B 8 808 260 HOH HOH . N 7 HOH B 9 809 282 HOH HOH . N 7 HOH B 10 810 51 HOH HOH . N 7 HOH B 11 811 303 HOH HOH . N 7 HOH B 12 812 251 HOH HOH . N 7 HOH B 13 813 247 HOH HOH . N 7 HOH B 14 814 65 HOH HOH . N 7 HOH B 15 815 41 HOH HOH . N 7 HOH B 16 816 100 HOH HOH . N 7 HOH B 17 817 124 HOH HOH . N 7 HOH B 18 818 16 HOH HOH . N 7 HOH B 19 819 99 HOH HOH . N 7 HOH B 20 820 127 HOH HOH . N 7 HOH B 21 821 130 HOH HOH . N 7 HOH B 22 822 79 HOH HOH . N 7 HOH B 23 823 50 HOH HOH . N 7 HOH B 24 824 86 HOH HOH . N 7 HOH B 25 825 28 HOH HOH . N 7 HOH B 26 826 192 HOH HOH . N 7 HOH B 27 827 162 HOH HOH . N 7 HOH B 28 828 286 HOH HOH . N 7 HOH B 29 829 139 HOH HOH . N 7 HOH B 30 830 74 HOH HOH . N 7 HOH B 31 831 97 HOH HOH . N 7 HOH B 32 832 255 HOH HOH . N 7 HOH B 33 833 82 HOH HOH . N 7 HOH B 34 834 66 HOH HOH . N 7 HOH B 35 835 15 HOH HOH . N 7 HOH B 36 836 18 HOH HOH . N 7 HOH B 37 837 106 HOH HOH . N 7 HOH B 38 838 270 HOH HOH . N 7 HOH B 39 839 160 HOH HOH . N 7 HOH B 40 840 230 HOH HOH . N 7 HOH B 41 841 31 HOH HOH . N 7 HOH B 42 842 75 HOH HOH . N 7 HOH B 43 843 55 HOH HOH . N 7 HOH B 44 844 173 HOH HOH . N 7 HOH B 45 845 152 HOH HOH . N 7 HOH B 46 846 81 HOH HOH . N 7 HOH B 47 847 257 HOH HOH . N 7 HOH B 48 848 96 HOH HOH . N 7 HOH B 49 849 246 HOH HOH . N 7 HOH B 50 850 231 HOH HOH . N 7 HOH B 51 851 95 HOH HOH . N 7 HOH B 52 852 141 HOH HOH . N 7 HOH B 53 853 232 HOH HOH . N 7 HOH B 54 854 153 HOH HOH . N 7 HOH B 55 855 40 HOH HOH . N 7 HOH B 56 856 211 HOH HOH . N 7 HOH B 57 857 142 HOH HOH . N 7 HOH B 58 858 289 HOH HOH . N 7 HOH B 59 859 206 HOH HOH . N 7 HOH B 60 860 1 HOH HOH . N 7 HOH B 61 861 158 HOH HOH . N 7 HOH B 62 862 235 HOH HOH . N 7 HOH B 63 863 70 HOH HOH . N 7 HOH B 64 864 178 HOH HOH . N 7 HOH B 65 865 274 HOH HOH . N 7 HOH B 66 866 295 HOH HOH . N 7 HOH B 67 867 300 HOH HOH . N 7 HOH B 68 868 131 HOH HOH . N 7 HOH B 69 869 263 HOH HOH . N 7 HOH B 70 870 233 HOH HOH . N 7 HOH B 71 871 181 HOH HOH . N 7 HOH B 72 872 250 HOH HOH . N 7 HOH B 73 873 90 HOH HOH . N 7 HOH B 74 874 256 HOH HOH . N 7 HOH B 75 875 140 HOH HOH . N 7 HOH B 76 876 121 HOH HOH . N 7 HOH B 77 877 285 HOH HOH . N 7 HOH B 78 878 170 HOH HOH . N 7 HOH B 79 879 236 HOH HOH . N 7 HOH B 80 880 273 HOH HOH . N 7 HOH B 81 881 21 HOH HOH . N 7 HOH B 82 882 262 HOH HOH . N 7 HOH B 83 883 205 HOH HOH . N 7 HOH B 84 884 184 HOH HOH . N 7 HOH B 85 885 185 HOH HOH . N 7 HOH B 86 886 243 HOH HOH . N 7 HOH B 87 887 67 HOH HOH . N 7 HOH B 88 888 43 HOH HOH . N 7 HOH B 89 889 85 HOH HOH . N 7 HOH B 90 890 119 HOH HOH . N 7 HOH B 91 891 259 HOH HOH . N 7 HOH B 92 892 242 HOH HOH . N 7 HOH B 93 893 290 HOH HOH . N 7 HOH B 94 894 116 HOH HOH . N 7 HOH B 95 895 186 HOH HOH . N 7 HOH B 96 896 299 HOH HOH . N 7 HOH B 97 897 113 HOH HOH . N 7 HOH B 98 898 8 HOH HOH . N 7 HOH B 99 899 288 HOH HOH . N 7 HOH B 100 900 258 HOH HOH . N 7 HOH B 101 901 227 HOH HOH . N 7 HOH B 102 902 204 HOH HOH . N 7 HOH B 103 903 267 HOH HOH . N 7 HOH B 104 904 151 HOH HOH . N 7 HOH B 105 905 302 HOH HOH . N 7 HOH B 106 906 187 HOH HOH . N 7 HOH B 107 907 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 6 31.111 28.175 18.216 1 103.23 ? S SO4 704 A 1 HETATM 2 O O1 SO4 . . . F 6 31.49 26.844 17.746 1 96.59 ? O1 SO4 704 A 1 HETATM 3 O O2 SO4 . . . F 6 29.947 28.643 17.469 1 103.34 ? O2 SO4 704 A 1 HETATM 4 O O3 SO4 . . . F 6 32.221 29.1 18.005 1 87.02 ? O3 SO4 704 A 1 HETATM 5 O O4 SO4 . . . F 6 30.787 28.118 19.639 1 101.4 ? O4 SO4 704 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #