data_8D4V # _model_server_result.job_id LZrwCiKrFhAE-6ZPYW-CJw _model_server_result.datetime_utc '2024-10-19 03:36:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d4v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 8D4V # _exptl.entry_id 8D4V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8D4V _cell.length_a 77.561 _cell.length_b 80.273 _cell.length_c 99.761 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D4V _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 44 1_555 A SG CYS 45 A CYS 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 122 A CYS 137 1_555 A SG CYS 187 A CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf3 A SG CYS 152 A CYS 167 1_555 A SG CYS 166 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 B SG CYS 29 C CYS 44 1_555 B SG CYS 45 C CYS 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf5 B SG CYS 122 C CYS 137 1_555 B SG CYS 187 C CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 B SG CYS 152 C CYS 167 1_555 B SG CYS 166 C CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 8D4V _atom_sites.fract_transf_matrix[1][1] 0.012893 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012457 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010024 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 301 2 SO4 SO4 . F 3 SO4 C 1 301 1 SO4 SO4 . G 4 HOH A 1 401 181 HOH HOH . G 4 HOH A 2 402 152 HOH HOH . G 4 HOH A 3 403 172 HOH HOH . G 4 HOH A 4 404 131 HOH HOH . G 4 HOH A 5 405 159 HOH HOH . G 4 HOH A 6 406 24 HOH HOH . G 4 HOH A 7 407 45 HOH HOH . G 4 HOH A 8 408 162 HOH HOH . G 4 HOH A 9 409 85 HOH HOH . G 4 HOH A 10 410 59 HOH HOH . G 4 HOH A 11 411 28 HOH HOH . G 4 HOH A 12 412 44 HOH HOH . G 4 HOH A 13 413 94 HOH HOH . G 4 HOH A 14 414 7 HOH HOH . G 4 HOH A 15 415 62 HOH HOH . G 4 HOH A 16 416 91 HOH HOH . G 4 HOH A 17 417 8 HOH HOH . G 4 HOH A 18 418 71 HOH HOH . G 4 HOH A 19 419 36 HOH HOH . G 4 HOH A 20 420 228 HOH HOH . G 4 HOH A 21 421 204 HOH HOH . G 4 HOH A 22 422 169 HOH HOH . G 4 HOH A 23 423 105 HOH HOH . G 4 HOH A 24 424 120 HOH HOH . G 4 HOH A 25 425 55 HOH HOH . G 4 HOH A 26 426 89 HOH HOH . G 4 HOH A 27 427 173 HOH HOH . G 4 HOH A 28 428 3 HOH HOH . G 4 HOH A 29 429 176 HOH HOH . G 4 HOH A 30 430 34 HOH HOH . G 4 HOH A 31 431 31 HOH HOH . G 4 HOH A 32 432 116 HOH HOH . G 4 HOH A 33 433 226 HOH HOH . G 4 HOH A 34 434 144 HOH HOH . G 4 HOH A 35 435 14 HOH HOH . G 4 HOH A 36 436 98 HOH HOH . G 4 HOH A 37 437 75 HOH HOH . G 4 HOH A 38 438 119 HOH HOH . G 4 HOH A 39 439 78 HOH HOH . G 4 HOH A 40 440 212 HOH HOH . G 4 HOH A 41 441 37 HOH HOH . G 4 HOH A 42 442 201 HOH HOH . G 4 HOH A 43 443 32 HOH HOH . G 4 HOH A 44 444 185 HOH HOH . G 4 HOH A 45 445 22 HOH HOH . G 4 HOH A 46 446 123 HOH HOH . G 4 HOH A 47 447 29 HOH HOH . G 4 HOH A 48 448 182 HOH HOH . G 4 HOH A 49 449 153 HOH HOH . G 4 HOH A 50 450 156 HOH HOH . G 4 HOH A 51 451 136 HOH HOH . G 4 HOH A 52 452 112 HOH HOH . G 4 HOH A 53 453 60 HOH HOH . G 4 HOH A 54 454 211 HOH HOH . G 4 HOH A 55 455 48 HOH HOH . G 4 HOH A 56 456 163 HOH HOH . G 4 HOH A 57 457 12 HOH HOH . G 4 HOH A 58 458 97 HOH HOH . G 4 HOH A 59 459 93 HOH HOH . G 4 HOH A 60 460 118 HOH HOH . G 4 HOH A 61 461 221 HOH HOH . G 4 HOH A 62 462 216 HOH HOH . G 4 HOH A 63 463 115 HOH HOH . G 4 HOH A 64 464 217 HOH HOH . G 4 HOH A 65 465 174 HOH HOH . G 4 HOH A 66 466 126 HOH HOH . G 4 HOH A 67 467 178 HOH HOH . G 4 HOH A 68 468 35 HOH HOH . G 4 HOH A 69 469 79 HOH HOH . G 4 HOH A 70 470 140 HOH HOH . G 4 HOH A 71 471 224 HOH HOH . G 4 HOH A 72 472 205 HOH HOH . G 4 HOH A 73 473 124 HOH HOH . G 4 HOH A 74 474 230 HOH HOH . G 4 HOH A 75 475 213 HOH HOH . G 4 HOH A 76 476 232 HOH HOH . H 4 HOH C 1 401 135 HOH HOH . H 4 HOH C 2 402 155 HOH HOH . H 4 HOH C 3 403 166 HOH HOH . H 4 HOH C 4 404 138 HOH HOH . H 4 HOH C 5 405 191 HOH HOH . H 4 HOH C 6 406 215 HOH HOH . H 4 HOH C 7 407 90 HOH HOH . H 4 HOH C 8 408 26 HOH HOH . H 4 HOH C 9 409 80 HOH HOH . H 4 HOH C 10 410 66 HOH HOH . H 4 HOH C 11 411 9 HOH HOH . H 4 HOH C 12 412 21 HOH HOH . H 4 HOH C 13 413 100 HOH HOH . H 4 HOH C 14 414 186 HOH HOH . H 4 HOH C 15 415 223 HOH HOH . H 4 HOH C 16 416 41 HOH HOH . H 4 HOH C 17 417 77 HOH HOH . H 4 HOH C 18 418 40 HOH HOH . H 4 HOH C 19 419 170 HOH HOH . H 4 HOH C 20 420 20 HOH HOH . H 4 HOH C 21 421 47 HOH HOH . H 4 HOH C 22 422 52 HOH HOH . H 4 HOH C 23 423 58 HOH HOH . H 4 HOH C 24 424 179 HOH HOH . H 4 HOH C 25 425 27 HOH HOH . H 4 HOH C 26 426 92 HOH HOH . H 4 HOH C 27 427 16 HOH HOH . H 4 HOH C 28 428 210 HOH HOH . H 4 HOH C 29 429 68 HOH HOH . H 4 HOH C 30 430 33 HOH HOH . H 4 HOH C 31 431 39 HOH HOH . H 4 HOH C 32 432 42 HOH HOH . H 4 HOH C 33 433 4 HOH HOH . H 4 HOH C 34 434 113 HOH HOH . H 4 HOH C 35 435 95 HOH HOH . H 4 HOH C 36 436 107 HOH HOH . H 4 HOH C 37 437 88 HOH HOH . H 4 HOH C 38 438 142 HOH HOH . H 4 HOH C 39 439 10 HOH HOH . H 4 HOH C 40 440 1 HOH HOH . H 4 HOH C 41 441 13 HOH HOH . H 4 HOH C 42 442 117 HOH HOH . H 4 HOH C 43 443 72 HOH HOH . H 4 HOH C 44 444 67 HOH HOH . H 4 HOH C 45 445 70 HOH HOH . H 4 HOH C 46 446 160 HOH HOH . H 4 HOH C 47 447 74 HOH HOH . H 4 HOH C 48 448 106 HOH HOH . H 4 HOH C 49 449 194 HOH HOH . H 4 HOH C 50 450 87 HOH HOH . H 4 HOH C 51 451 114 HOH HOH . H 4 HOH C 52 452 5 HOH HOH . H 4 HOH C 53 453 6 HOH HOH . H 4 HOH C 54 454 83 HOH HOH . H 4 HOH C 55 455 64 HOH HOH . H 4 HOH C 56 456 2 HOH HOH . H 4 HOH C 57 457 53 HOH HOH . H 4 HOH C 58 458 110 HOH HOH . H 4 HOH C 59 459 200 HOH HOH . H 4 HOH C 60 460 141 HOH HOH . H 4 HOH C 61 461 187 HOH HOH . H 4 HOH C 62 462 134 HOH HOH . H 4 HOH C 63 463 49 HOH HOH . H 4 HOH C 64 464 17 HOH HOH . H 4 HOH C 65 465 149 HOH HOH . H 4 HOH C 66 466 46 HOH HOH . H 4 HOH C 67 467 207 HOH HOH . H 4 HOH C 68 468 73 HOH HOH . H 4 HOH C 69 469 103 HOH HOH . H 4 HOH C 70 470 189 HOH HOH . H 4 HOH C 71 471 164 HOH HOH . H 4 HOH C 72 472 177 HOH HOH . H 4 HOH C 73 473 183 HOH HOH . H 4 HOH C 74 474 208 HOH HOH . H 4 HOH C 75 475 137 HOH HOH . H 4 HOH C 76 476 214 HOH HOH . H 4 HOH C 77 477 151 HOH HOH . H 4 HOH C 78 478 82 HOH HOH . H 4 HOH C 79 479 102 HOH HOH . H 4 HOH C 80 480 56 HOH HOH . H 4 HOH C 81 481 209 HOH HOH . H 4 HOH C 82 482 197 HOH HOH . H 4 HOH C 83 483 84 HOH HOH . H 4 HOH C 84 484 111 HOH HOH . H 4 HOH C 85 485 154 HOH HOH . H 4 HOH C 86 486 196 HOH HOH . H 4 HOH C 87 487 51 HOH HOH . H 4 HOH C 88 488 229 HOH HOH . H 4 HOH C 89 489 193 HOH HOH . H 4 HOH C 90 490 220 HOH HOH . I 4 HOH B 1 301 218 HOH HOH . I 4 HOH B 2 302 50 HOH HOH . I 4 HOH B 3 303 195 HOH HOH . I 4 HOH B 4 304 133 HOH HOH . I 4 HOH B 5 305 25 HOH HOH . I 4 HOH B 6 306 18 HOH HOH . I 4 HOH B 7 307 54 HOH HOH . I 4 HOH B 8 308 104 HOH HOH . I 4 HOH B 9 309 188 HOH HOH . I 4 HOH B 10 310 99 HOH HOH . I 4 HOH B 11 311 15 HOH HOH . I 4 HOH B 12 312 145 HOH HOH . I 4 HOH B 13 313 165 HOH HOH . I 4 HOH B 14 314 158 HOH HOH . I 4 HOH B 15 315 139 HOH HOH . I 4 HOH B 16 316 109 HOH HOH . I 4 HOH B 17 317 161 HOH HOH . I 4 HOH B 18 318 38 HOH HOH . I 4 HOH B 19 319 63 HOH HOH . I 4 HOH B 20 320 130 HOH HOH . I 4 HOH B 21 321 96 HOH HOH . I 4 HOH B 22 322 121 HOH HOH . I 4 HOH B 23 323 227 HOH HOH . I 4 HOH B 24 324 125 HOH HOH . I 4 HOH B 25 325 86 HOH HOH . I 4 HOH B 26 326 171 HOH HOH . I 4 HOH B 27 327 43 HOH HOH . I 4 HOH B 28 328 203 HOH HOH . I 4 HOH B 29 329 128 HOH HOH . I 4 HOH B 30 330 143 HOH HOH . J 4 HOH D 1 301 180 HOH HOH . J 4 HOH D 2 302 198 HOH HOH . J 4 HOH D 3 303 150 HOH HOH . J 4 HOH D 4 304 157 HOH HOH . J 4 HOH D 5 305 65 HOH HOH . J 4 HOH D 6 306 23 HOH HOH . J 4 HOH D 7 307 147 HOH HOH . J 4 HOH D 8 308 132 HOH HOH . J 4 HOH D 9 309 30 HOH HOH . J 4 HOH D 10 310 11 HOH HOH . J 4 HOH D 11 311 146 HOH HOH . J 4 HOH D 12 312 101 HOH HOH . J 4 HOH D 13 313 57 HOH HOH . J 4 HOH D 14 314 81 HOH HOH . J 4 HOH D 15 315 76 HOH HOH . J 4 HOH D 16 316 61 HOH HOH . J 4 HOH D 17 317 206 HOH HOH . J 4 HOH D 18 318 190 HOH HOH . J 4 HOH D 19 319 19 HOH HOH . J 4 HOH D 20 320 184 HOH HOH . J 4 HOH D 21 321 108 HOH HOH . J 4 HOH D 22 322 199 HOH HOH . J 4 HOH D 23 323 148 HOH HOH . J 4 HOH D 24 324 175 HOH HOH . J 4 HOH D 25 325 167 HOH HOH . J 4 HOH D 26 326 192 HOH HOH . J 4 HOH D 27 327 127 HOH HOH . J 4 HOH D 28 328 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 3 29.756 11.804 0.543 1 41.71 ? S SO4 301 A 1 HETATM 2 O O1 SO4 . . . E 3 30.261 12.415 -0.677 1 41.22 ? O1 SO4 301 A 1 HETATM 3 O O2 SO4 . . . E 3 29.453 10.398 0.277 1 48.3 ? O2 SO4 301 A 1 HETATM 4 O O3 SO4 . . . E 3 28.535 12.483 0.961 1 34.93 ? O3 SO4 301 A 1 HETATM 5 O O4 SO4 . . . E 3 30.777 11.918 1.573 1 47.82 ? O4 SO4 301 A 1 # _model_server_stats.io_time_ms 88 _model_server_stats.parse_time_ms 169 _model_server_stats.create_model_time_ms 51 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #