data_8D51 # _model_server_result.job_id HacdGFf-JaRjI8euob_j4g _model_server_result.datetime_utc '2025-06-22 11:38:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d51 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 8D51 # _exptl.entry_id 8D51 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8D51 _cell.length_a 58.472 _cell.length_b 58.472 _cell.length_c 206.331 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D51 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall 'R 3 2"' _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 21 A CYS 48 1_555 A SG CYS 46 A CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 37 A CYS 108 1_555 A SG CYS 77 A CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 60 A CYS 131 1_555 A SG CYS 99 A CYS 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 B C GLU 16 B GLU 30 1_555 B N HT7 17 B HT7 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 B C HT7 17 B HT7 31 1_555 B N HIS 18 B HIS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 B NE2 HIS 12 B HIS 26 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc2 B NE2 HIS 12 B HIS 26 1_555 D ZN ZN . B ZN 101 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc3 D ZN ZN . B ZN 101 1_555 F O HOH . B HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc4 D ZN ZN . B ZN 101 1_555 F O HOH . B HOH 204 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8D51 _atom_sites.fract_transf_matrix[1][1] 0.017102 _atom_sites.fract_transf_matrix[1][2] 0.009874 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004847 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 201 101 EDO EDO . D 4 ZN B 1 101 1 ZN ZN . E 5 HOH A 1 301 30 HOH HOH . E 5 HOH A 2 302 36 HOH HOH . E 5 HOH A 3 303 38 HOH HOH . E 5 HOH A 4 304 3 HOH HOH . E 5 HOH A 5 305 29 HOH HOH . E 5 HOH A 6 306 2 HOH HOH . E 5 HOH A 7 307 8 HOH HOH . E 5 HOH A 8 308 18 HOH HOH . E 5 HOH A 9 309 12 HOH HOH . E 5 HOH A 10 310 17 HOH HOH . E 5 HOH A 11 311 11 HOH HOH . E 5 HOH A 12 312 31 HOH HOH . E 5 HOH A 13 313 6 HOH HOH . E 5 HOH A 14 314 20 HOH HOH . E 5 HOH A 15 315 1 HOH HOH . E 5 HOH A 16 316 5 HOH HOH . E 5 HOH A 17 317 27 HOH HOH . E 5 HOH A 18 318 37 HOH HOH . E 5 HOH A 19 319 9 HOH HOH . E 5 HOH A 20 320 25 HOH HOH . E 5 HOH A 21 321 21 HOH HOH . E 5 HOH A 22 322 15 HOH HOH . E 5 HOH A 23 323 4 HOH HOH . E 5 HOH A 24 324 22 HOH HOH . E 5 HOH A 25 325 33 HOH HOH . E 5 HOH A 26 326 7 HOH HOH . E 5 HOH A 27 327 16 HOH HOH . E 5 HOH A 28 328 10 HOH HOH . E 5 HOH A 29 329 40 HOH HOH . E 5 HOH A 30 330 19 HOH HOH . F 5 HOH B 1 201 23 HOH HOH . F 5 HOH B 2 202 28 HOH HOH . F 5 HOH B 3 203 14 HOH HOH . F 5 HOH B 4 204 11 HOH HOH . F 5 HOH B 5 205 26 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z 11.323 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 45.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #