data_8D5Q # _model_server_result.job_id zJavJzTpQ2RW76Uczz-ECw _model_server_result.datetime_utc '2025-01-10 12:34:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d5q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 8D5Q # _exptl.entry_id 8D5Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8D5Q _cell.length_a 89.963 _cell.length_b 89.963 _cell.length_c 105.982 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D5Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 22 1_555 A SG CYS 90 A CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 A SG CYS 138 A CYS 137 1_555 A SG CYS 188 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? disulf ? disulf3 A SG CYS 163 A CYS 162 1_555 B SG CYS 171 B CYS 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf4 B SG CYS 23 B CYS 22 1_555 B SG CYS 91 B CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf5 B SG CYS 145 B CYS 144 1_555 B SG CYS 210 B CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf6 C SG CYS 102 C CYS 101 1_555 C SG CYS 165 C CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 315 n n S O2 SO4 doub 316 n n S O3 SO4 sing 317 n n S O4 SO4 sing 318 n n # _atom_sites.entry_id 8D5Q _atom_sites.fract_transf_matrix[1][1] 0.011116 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011116 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009436 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 SO4 B 1 301 301 SO4 SO4 . F 6 MES B 1 302 302 MES MES . G 5 SO4 C 1 201 201 SO4 SO4 . H 7 HOH A 1 301 301 HOH HOH . H 7 HOH A 2 302 302 HOH HOH . H 7 HOH A 3 303 303 HOH HOH . H 7 HOH A 4 304 304 HOH HOH . H 7 HOH A 5 305 305 HOH HOH . H 7 HOH A 6 306 306 HOH HOH . H 7 HOH A 7 307 307 HOH HOH . H 7 HOH A 8 308 308 HOH HOH . H 7 HOH A 9 309 309 HOH HOH . H 7 HOH A 10 310 310 HOH HOH . H 7 HOH A 11 311 311 HOH HOH . H 7 HOH A 12 312 312 HOH HOH . H 7 HOH A 13 313 313 HOH HOH . H 7 HOH A 14 314 314 HOH HOH . H 7 HOH A 15 315 315 HOH HOH . H 7 HOH A 16 316 316 HOH HOH . H 7 HOH A 17 317 317 HOH HOH . H 7 HOH A 18 318 318 HOH HOH . H 7 HOH A 19 319 319 HOH HOH . H 7 HOH A 20 320 320 HOH HOH . H 7 HOH A 21 321 321 HOH HOH . H 7 HOH A 22 322 322 HOH HOH . H 7 HOH A 23 323 323 HOH HOH . H 7 HOH A 24 324 324 HOH HOH . H 7 HOH A 25 325 325 HOH HOH . H 7 HOH A 26 326 326 HOH HOH . H 7 HOH A 27 327 327 HOH HOH . H 7 HOH A 28 328 328 HOH HOH . H 7 HOH A 29 329 329 HOH HOH . H 7 HOH A 30 330 330 HOH HOH . H 7 HOH A 31 331 331 HOH HOH . H 7 HOH A 32 332 332 HOH HOH . H 7 HOH A 33 333 333 HOH HOH . H 7 HOH A 34 334 334 HOH HOH . H 7 HOH A 35 335 335 HOH HOH . H 7 HOH A 36 336 336 HOH HOH . H 7 HOH A 37 337 337 HOH HOH . H 7 HOH A 38 338 338 HOH HOH . H 7 HOH A 39 339 339 HOH HOH . H 7 HOH A 40 340 340 HOH HOH . H 7 HOH A 41 341 341 HOH HOH . H 7 HOH A 42 342 342 HOH HOH . H 7 HOH A 43 343 343 HOH HOH . H 7 HOH A 44 344 344 HOH HOH . H 7 HOH A 45 345 345 HOH HOH . H 7 HOH A 46 346 346 HOH HOH . H 7 HOH A 47 347 347 HOH HOH . H 7 HOH A 48 348 348 HOH HOH . H 7 HOH A 49 349 349 HOH HOH . H 7 HOH A 50 350 350 HOH HOH . H 7 HOH A 51 351 351 HOH HOH . H 7 HOH A 52 352 352 HOH HOH . H 7 HOH A 53 353 353 HOH HOH . H 7 HOH A 54 354 354 HOH HOH . H 7 HOH A 55 355 355 HOH HOH . H 7 HOH A 56 356 356 HOH HOH . H 7 HOH A 57 357 357 HOH HOH . H 7 HOH A 58 358 358 HOH HOH . H 7 HOH A 59 359 359 HOH HOH . H 7 HOH A 60 360 360 HOH HOH . H 7 HOH A 61 361 361 HOH HOH . H 7 HOH A 62 362 362 HOH HOH . H 7 HOH A 63 363 363 HOH HOH . H 7 HOH A 64 364 364 HOH HOH . H 7 HOH A 65 365 365 HOH HOH . H 7 HOH A 66 366 366 HOH HOH . I 7 HOH B 1 401 401 HOH HOH . I 7 HOH B 2 402 402 HOH HOH . I 7 HOH B 3 403 403 HOH HOH . I 7 HOH B 4 404 404 HOH HOH . I 7 HOH B 5 405 405 HOH HOH . I 7 HOH B 6 406 406 HOH HOH . I 7 HOH B 7 407 407 HOH HOH . I 7 HOH B 8 408 408 HOH HOH . I 7 HOH B 9 409 409 HOH HOH . I 7 HOH B 10 410 410 HOH HOH . I 7 HOH B 11 411 411 HOH HOH . I 7 HOH B 12 412 412 HOH HOH . I 7 HOH B 13 413 413 HOH HOH . I 7 HOH B 14 414 414 HOH HOH . I 7 HOH B 15 415 415 HOH HOH . I 7 HOH B 16 416 416 HOH HOH . I 7 HOH B 17 417 417 HOH HOH . I 7 HOH B 18 418 418 HOH HOH . I 7 HOH B 19 419 419 HOH HOH . I 7 HOH B 20 420 420 HOH HOH . I 7 HOH B 21 421 421 HOH HOH . I 7 HOH B 22 422 422 HOH HOH . I 7 HOH B 23 423 423 HOH HOH . I 7 HOH B 24 424 424 HOH HOH . I 7 HOH B 25 425 425 HOH HOH . I 7 HOH B 26 426 426 HOH HOH . I 7 HOH B 27 427 427 HOH HOH . I 7 HOH B 28 428 428 HOH HOH . I 7 HOH B 29 429 429 HOH HOH . I 7 HOH B 30 430 430 HOH HOH . I 7 HOH B 31 431 431 HOH HOH . I 7 HOH B 32 432 432 HOH HOH . I 7 HOH B 33 433 433 HOH HOH . I 7 HOH B 34 434 434 HOH HOH . I 7 HOH B 35 435 435 HOH HOH . I 7 HOH B 36 436 436 HOH HOH . I 7 HOH B 37 437 437 HOH HOH . I 7 HOH B 38 438 438 HOH HOH . I 7 HOH B 39 439 439 HOH HOH . I 7 HOH B 40 440 440 HOH HOH . I 7 HOH B 41 441 441 HOH HOH . I 7 HOH B 42 442 442 HOH HOH . I 7 HOH B 43 443 443 HOH HOH . I 7 HOH B 44 444 444 HOH HOH . I 7 HOH B 45 445 445 HOH HOH . I 7 HOH B 46 446 446 HOH HOH . I 7 HOH B 47 447 447 HOH HOH . I 7 HOH B 48 448 448 HOH HOH . I 7 HOH B 49 449 449 HOH HOH . I 7 HOH B 50 450 450 HOH HOH . I 7 HOH B 51 451 451 HOH HOH . I 7 HOH B 52 452 452 HOH HOH . I 7 HOH B 53 453 453 HOH HOH . I 7 HOH B 54 454 454 HOH HOH . I 7 HOH B 55 455 455 HOH HOH . I 7 HOH B 56 456 456 HOH HOH . I 7 HOH B 57 457 457 HOH HOH . I 7 HOH B 58 458 458 HOH HOH . I 7 HOH B 59 459 459 HOH HOH . I 7 HOH B 60 460 460 HOH HOH . I 7 HOH B 61 461 461 HOH HOH . I 7 HOH B 62 462 462 HOH HOH . I 7 HOH B 63 463 463 HOH HOH . I 7 HOH B 64 464 464 HOH HOH . I 7 HOH B 65 465 465 HOH HOH . I 7 HOH B 66 466 466 HOH HOH . I 7 HOH B 67 467 467 HOH HOH . I 7 HOH B 68 468 468 HOH HOH . I 7 HOH B 69 469 469 HOH HOH . I 7 HOH B 70 470 470 HOH HOH . I 7 HOH B 71 471 471 HOH HOH . J 7 HOH C 1 301 301 HOH HOH . J 7 HOH C 2 302 302 HOH HOH . J 7 HOH C 3 303 303 HOH HOH . J 7 HOH C 4 304 304 HOH HOH . J 7 HOH C 5 305 305 HOH HOH . J 7 HOH C 6 306 306 HOH HOH . J 7 HOH C 7 307 307 HOH HOH . J 7 HOH C 8 308 308 HOH HOH . J 7 HOH C 9 309 309 HOH HOH . J 7 HOH C 10 310 310 HOH HOH . J 7 HOH C 11 311 311 HOH HOH . J 7 HOH C 12 312 312 HOH HOH . J 7 HOH C 13 313 313 HOH HOH . J 7 HOH C 14 314 314 HOH HOH . J 7 HOH C 15 315 315 HOH HOH . J 7 HOH C 16 316 316 HOH HOH . J 7 HOH C 17 317 317 HOH HOH . J 7 HOH C 18 318 318 HOH HOH . J 7 HOH C 19 319 319 HOH HOH . J 7 HOH C 20 320 320 HOH HOH . J 7 HOH C 21 321 321 HOH HOH . J 7 HOH C 22 322 322 HOH HOH . J 7 HOH C 23 323 323 HOH HOH . J 7 HOH C 24 324 324 HOH HOH . J 7 HOH C 25 325 325 HOH HOH . J 7 HOH C 26 326 326 HOH HOH . J 7 HOH C 27 327 327 HOH HOH . J 7 HOH C 28 328 328 HOH HOH . J 7 HOH C 29 329 329 HOH HOH . J 7 HOH C 30 330 330 HOH HOH . J 7 HOH C 31 331 331 HOH HOH . J 7 HOH C 32 332 332 HOH HOH . J 7 HOH C 33 333 333 HOH HOH . J 7 HOH C 34 334 334 HOH HOH . J 7 HOH C 35 335 335 HOH HOH . J 7 HOH C 36 336 336 HOH HOH . J 7 HOH C 37 337 337 HOH HOH . J 7 HOH C 38 338 338 HOH HOH . J 7 HOH C 39 339 339 HOH HOH . J 7 HOH C 40 340 340 HOH HOH . J 7 HOH C 41 341 341 HOH HOH . J 7 HOH C 42 342 342 HOH HOH . J 7 HOH C 43 343 343 HOH HOH . J 7 HOH C 44 344 344 HOH HOH . J 7 HOH C 45 345 345 HOH HOH . J 7 HOH C 46 346 346 HOH HOH . J 7 HOH C 47 347 347 HOH HOH . J 7 HOH C 48 348 348 HOH HOH . J 7 HOH C 49 349 349 HOH HOH . J 7 HOH C 50 350 350 HOH HOH . J 7 HOH C 51 351 351 HOH HOH . J 7 HOH C 52 352 352 HOH HOH . J 7 HOH C 53 353 353 HOH HOH . J 7 HOH C 54 354 354 HOH HOH . J 7 HOH C 55 355 355 HOH HOH . J 7 HOH C 56 356 356 HOH HOH . J 7 HOH C 57 357 357 HOH HOH . J 7 HOH C 58 358 358 HOH HOH . J 7 HOH C 59 359 359 HOH HOH . J 7 HOH C 60 360 360 HOH HOH . J 7 HOH C 61 361 361 HOH HOH . J 7 HOH C 62 362 362 HOH HOH . J 7 HOH C 63 363 363 HOH HOH . J 7 HOH C 64 364 364 HOH HOH . J 7 HOH C 65 365 365 HOH HOH . K 7 HOH E 1 101 101 HOH HOH . K 7 HOH E 2 102 102 HOH HOH . K 7 HOH E 3 103 103 HOH HOH . K 7 HOH E 4 104 104 HOH HOH . K 7 HOH E 5 105 105 HOH HOH . K 7 HOH E 6 106 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 5 50.597 -99.046 3.577 1 81.95 ? S SO4 301 B 1 HETATM 2 O O1 SO4 . . . E 5 51.611 -99.002 2.558 1 87.5 ? O1 SO4 301 B 1 HETATM 3 O O2 SO4 . . . E 5 49.324 -99.356 2.987 1 91.31 ? O2 SO4 301 B 1 HETATM 4 O O3 SO4 . . . E 5 50.941 -100.068 4.536 1 70.21 ? O3 SO4 301 B 1 HETATM 5 O O4 SO4 . . . E 5 50.496 -97.751 4.218 1 84.77 ? O4 SO4 301 B 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 5 #