data_8D6H # _model_server_result.job_id omYGmZte6iGNPvr6sv6mUg _model_server_result.datetime_utc '2024-11-15 12:40:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 8D6H # _exptl.entry_id 8D6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.102 _cell.angle_gamma 90 _cell.entry_id 8D6H _cell.length_a 29.698 _cell.length_b 66.972 _cell.length_c 63.817 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 108 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 108 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id C16 _struct_conn.ptnr2_label_comp_id RH6 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RH6 _struct_conn.ptnr2_auth_seq_id 308 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.428 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 8D6H _atom_sites.fract_transf_matrix[1][1] 0.033672 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001236 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014932 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 301 GOL GOL . C 2 GOL A 1 302 401 GOL GOL . D 2 GOL A 1 303 501 GOL GOL . E 2 GOL A 1 304 601 GOL GOL . F 3 ACT A 1 305 701 ACT ACT . G 3 ACT A 1 306 801 ACT ACT . H 3 ACT A 1 307 901 ACT ACT . I 4 RH6 A 1 308 201 RH6 LIG . J 2 GOL A 1 309 1 GOL GOL . K 2 GOL A 1 310 2 GOL GOL . L 2 GOL A 1 311 3 GOL GOL . M 2 GOL A 1 312 5 GOL GOL . N 2 GOL A 1 313 6 GOL GOL . O 2 GOL A 1 314 7 GOL GOL . P 2 GOL A 1 315 8 GOL GOL . Q 5 HOH A 1 401 38 HOH HOH . Q 5 HOH A 2 402 61 HOH HOH . Q 5 HOH A 3 403 52 HOH HOH . Q 5 HOH A 4 404 70 HOH HOH . Q 5 HOH A 5 405 35 HOH HOH . Q 5 HOH A 6 406 42 HOH HOH . Q 5 HOH A 7 407 43 HOH HOH . Q 5 HOH A 8 408 67 HOH HOH . Q 5 HOH A 9 409 25 HOH HOH . Q 5 HOH A 10 410 74 HOH HOH . Q 5 HOH A 11 411 29 HOH HOH . Q 5 HOH A 12 412 24 HOH HOH . Q 5 HOH A 13 413 31 HOH HOH . Q 5 HOH A 14 414 56 HOH HOH . Q 5 HOH A 15 415 40 HOH HOH . Q 5 HOH A 16 416 51 HOH HOH . Q 5 HOH A 17 417 17 HOH HOH . Q 5 HOH A 18 418 55 HOH HOH . Q 5 HOH A 19 419 54 HOH HOH . Q 5 HOH A 20 420 44 HOH HOH . Q 5 HOH A 21 421 34 HOH HOH . Q 5 HOH A 22 422 27 HOH HOH . Q 5 HOH A 23 423 33 HOH HOH . Q 5 HOH A 24 424 19 HOH HOH . Q 5 HOH A 25 425 28 HOH HOH . Q 5 HOH A 26 426 60 HOH HOH . Q 5 HOH A 27 427 11 HOH HOH . Q 5 HOH A 28 428 8 HOH HOH . Q 5 HOH A 29 429 39 HOH HOH . Q 5 HOH A 30 430 16 HOH HOH . Q 5 HOH A 31 431 2 HOH HOH . Q 5 HOH A 32 432 13 HOH HOH . Q 5 HOH A 33 433 20 HOH HOH . Q 5 HOH A 34 434 6 HOH HOH . Q 5 HOH A 35 435 46 HOH HOH . Q 5 HOH A 36 436 14 HOH HOH . Q 5 HOH A 37 437 26 HOH HOH . Q 5 HOH A 38 438 22 HOH HOH . Q 5 HOH A 39 439 65 HOH HOH . Q 5 HOH A 40 440 23 HOH HOH . Q 5 HOH A 41 441 50 HOH HOH . Q 5 HOH A 42 442 9 HOH HOH . Q 5 HOH A 43 443 48 HOH HOH . Q 5 HOH A 44 444 7 HOH HOH . Q 5 HOH A 45 445 49 HOH HOH . Q 5 HOH A 46 446 10 HOH HOH . Q 5 HOH A 47 447 53 HOH HOH . Q 5 HOH A 48 448 12 HOH HOH . Q 5 HOH A 49 449 3 HOH HOH . Q 5 HOH A 50 450 41 HOH HOH . Q 5 HOH A 51 451 32 HOH HOH . Q 5 HOH A 52 452 45 HOH HOH . Q 5 HOH A 53 453 30 HOH HOH . Q 5 HOH A 54 454 76 HOH HOH . Q 5 HOH A 55 455 1 HOH HOH . Q 5 HOH A 56 456 5 HOH HOH . Q 5 HOH A 57 457 73 HOH HOH . Q 5 HOH A 58 458 21 HOH HOH . Q 5 HOH A 59 459 57 HOH HOH . Q 5 HOH A 60 460 36 HOH HOH . Q 5 HOH A 61 461 37 HOH HOH . Q 5 HOH A 62 462 4 HOH HOH . Q 5 HOH A 63 463 64 HOH HOH . Q 5 HOH A 64 464 66 HOH HOH . Q 5 HOH A 65 465 68 HOH HOH . Q 5 HOH A 66 466 59 HOH HOH . Q 5 HOH A 67 467 77 HOH HOH . Q 5 HOH A 68 468 15 HOH HOH . Q 5 HOH A 69 469 63 HOH HOH . Q 5 HOH A 70 470 18 HOH HOH . Q 5 HOH A 71 471 58 HOH HOH . Q 5 HOH A 72 472 62 HOH HOH . Q 5 HOH A 73 473 75 HOH HOH . Q 5 HOH A 74 474 47 HOH HOH . Q 5 HOH A 75 475 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . F 3 10.079 -14.362 28.05 1 61.49 ? C ACT 305 A 1 HETATM 2 O O ACT . . . F 3 10.43 -14.735 26.896 1 61.47 ? O ACT 305 A 1 HETATM 3 O OXT ACT . . . F 3 9.621 -15.06 29.003 1 63.5 -1 OXT ACT 305 A 1 HETATM 4 C CH3 ACT . . . F 3 10.229 -12.833 28.36 1 54.89 ? CH3 ACT 305 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #