data_8D6N # _model_server_result.job_id HTpQNk2Y5QDhJRgXyQkrfw _model_server_result.datetime_utc '2024-11-15 14:35:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8d6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 8D6N # _exptl.entry_id 8D6N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.108 _cell.angle_gamma 90 _cell.entry_id 8D6N _cell.length_a 29.612 _cell.length_b 67.106 _cell.length_c 63.903 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8D6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 E N N ? 2 G N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 108 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 108 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C16 _struct_conn.ptnr2_label_comp_id RH6 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RH6 _struct_conn.ptnr2_auth_seq_id 202 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.241 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 8D6N _atom_sites.fract_transf_matrix[1][1] 0.03377 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000064 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015649 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 201 201 ACT ACT . C 3 RH6 A 1 202 301 RH6 LIG . D 4 GOL A 1 203 401 GOL GOL . E 2 ACT A 1 204 501 ACT ACT . F 4 GOL A 1 205 601 GOL GOL . G 2 ACT A 1 206 701 ACT ACT . H 4 GOL A 1 207 801 GOL GOL . I 4 GOL A 1 208 901 GOL GOL . J 4 GOL A 1 209 1001 GOL GOL . K 4 GOL A 1 210 1101 GOL GOL . L 5 MLA A 1 211 1201 MLA MAL . M 5 MLA A 1 212 1301 MLA MAL . N 4 GOL A 1 213 1401 GOL GOL . O 6 HOH A 1 301 48 HOH HOH . O 6 HOH A 2 302 15 HOH HOH . O 6 HOH A 3 303 40 HOH HOH . O 6 HOH A 4 304 29 HOH HOH . O 6 HOH A 5 305 42 HOH HOH . O 6 HOH A 6 306 8 HOH HOH . O 6 HOH A 7 307 22 HOH HOH . O 6 HOH A 8 308 20 HOH HOH . O 6 HOH A 9 309 39 HOH HOH . O 6 HOH A 10 310 25 HOH HOH . O 6 HOH A 11 311 49 HOH HOH . O 6 HOH A 12 312 27 HOH HOH . O 6 HOH A 13 313 11 HOH HOH . O 6 HOH A 14 314 19 HOH HOH . O 6 HOH A 15 315 36 HOH HOH . O 6 HOH A 16 316 4 HOH HOH . O 6 HOH A 17 317 28 HOH HOH . O 6 HOH A 18 318 10 HOH HOH . O 6 HOH A 19 319 7 HOH HOH . O 6 HOH A 20 320 24 HOH HOH . O 6 HOH A 21 321 2 HOH HOH . O 6 HOH A 22 322 26 HOH HOH . O 6 HOH A 23 323 12 HOH HOH . O 6 HOH A 24 324 30 HOH HOH . O 6 HOH A 25 325 3 HOH HOH . O 6 HOH A 26 326 21 HOH HOH . O 6 HOH A 27 327 41 HOH HOH . O 6 HOH A 28 328 1 HOH HOH . O 6 HOH A 29 329 6 HOH HOH . O 6 HOH A 30 330 31 HOH HOH . O 6 HOH A 31 331 32 HOH HOH . O 6 HOH A 32 332 14 HOH HOH . O 6 HOH A 33 333 13 HOH HOH . O 6 HOH A 34 334 35 HOH HOH . O 6 HOH A 35 335 23 HOH HOH . O 6 HOH A 36 336 38 HOH HOH . O 6 HOH A 37 337 9 HOH HOH . O 6 HOH A 38 338 5 HOH HOH . O 6 HOH A 39 339 16 HOH HOH . O 6 HOH A 40 340 37 HOH HOH . O 6 HOH A 41 341 46 HOH HOH . O 6 HOH A 42 342 47 HOH HOH . O 6 HOH A 43 343 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . B 2 7.79 0.525 12.163 1 23.07 ? C ACT 201 A 1 HETATM 2 O O ACT . . . B 2 6.607 0.859 12.456 1 23.94 ? O ACT 201 A 1 HETATM 3 O OXT ACT . . . B 2 8.796 0.517 12.902 1 20.68 ? OXT ACT 201 A 1 HETATM 4 C CH3 ACT . . . B 2 8.031 0.073 10.685 1 23.29 ? CH3 ACT 201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #