data_8DAZ # _model_server_result.job_id CVhWt-a76nITolzX3QQNEQ _model_server_result.datetime_utc '2025-01-10 18:38:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8daz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 8DAZ # _exptl.entry_id 8DAZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DAZ _cell.length_a 89.832 _cell.length_b 107.357 _cell.length_c 179.301 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DAZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,H 1 1 B,I 2 1 C,F,G,J 3 1 D,K 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 344 n n N H TRP sing 345 n n N H2 TRP sing 346 n n CA C TRP sing 347 n n CA CB TRP sing 348 n n CA HA TRP sing 349 n n C O TRP doub 350 n n C OXT TRP sing 351 n n CB CG TRP sing 352 n n CB HB2 TRP sing 353 n n CB HB3 TRP sing 354 n n CG CD1 TRP doub 355 n y CG CD2 TRP sing 356 n y CD1 NE1 TRP sing 357 n y CD1 HD1 TRP sing 358 n n CD2 CE2 TRP doub 359 n y CD2 CE3 TRP sing 360 n y NE1 CE2 TRP sing 361 n y NE1 HE1 TRP sing 362 n n CE2 CZ2 TRP sing 363 n y CE3 CZ3 TRP doub 364 n y CE3 HE3 TRP sing 365 n n CZ2 CH2 TRP doub 366 n y CZ2 HZ2 TRP sing 367 n n CZ3 CH2 TRP sing 368 n y CZ3 HZ3 TRP sing 369 n n CH2 HH2 TRP sing 370 n n OXT HXT TRP sing 371 n n # _atom_sites.entry_id 8DAZ _atom_sites.fract_transf_matrix[1][1] 0.011132 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009315 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005577 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 TRP A 1 501 501 TRP LTW . F 3 GST C 1 501 501 GST GST . G 2 TRP C 1 502 502 TRP LTW . H 4 HOH A 1 601 6 HOH HOH . H 4 HOH A 2 602 34 HOH HOH . H 4 HOH A 3 603 61 HOH HOH . H 4 HOH A 4 604 71 HOH HOH . H 4 HOH A 5 605 51 HOH HOH . H 4 HOH A 6 606 87 HOH HOH . H 4 HOH A 7 607 45 HOH HOH . H 4 HOH A 8 608 67 HOH HOH . H 4 HOH A 9 609 69 HOH HOH . H 4 HOH A 10 610 24 HOH HOH . H 4 HOH A 11 611 65 HOH HOH . H 4 HOH A 12 612 64 HOH HOH . H 4 HOH A 13 613 98 HOH HOH . H 4 HOH A 14 614 83 HOH HOH . H 4 HOH A 15 615 30 HOH HOH . H 4 HOH A 16 616 81 HOH HOH . H 4 HOH A 17 617 13 HOH HOH . H 4 HOH A 18 618 50 HOH HOH . H 4 HOH A 19 619 7 HOH HOH . H 4 HOH A 20 620 18 HOH HOH . H 4 HOH A 21 621 90 HOH HOH . H 4 HOH A 22 622 33 HOH HOH . H 4 HOH A 23 623 26 HOH HOH . H 4 HOH A 24 624 28 HOH HOH . H 4 HOH A 25 625 47 HOH HOH . H 4 HOH A 26 626 52 HOH HOH . H 4 HOH A 27 627 94 HOH HOH . H 4 HOH A 28 628 4 HOH HOH . H 4 HOH A 29 629 57 HOH HOH . H 4 HOH A 30 630 92 HOH HOH . H 4 HOH A 31 631 53 HOH HOH . H 4 HOH A 32 632 78 HOH HOH . H 4 HOH A 33 633 41 HOH HOH . H 4 HOH A 34 634 91 HOH HOH . H 4 HOH A 35 635 37 HOH HOH . H 4 HOH A 36 636 38 HOH HOH . H 4 HOH A 37 637 93 HOH HOH . H 4 HOH A 38 638 23 HOH HOH . H 4 HOH A 39 639 103 HOH HOH . H 4 HOH A 40 640 70 HOH HOH . H 4 HOH A 41 641 8 HOH HOH . H 4 HOH A 42 642 5 HOH HOH . H 4 HOH A 43 643 107 HOH HOH . I 4 HOH B 1 501 43 HOH HOH . I 4 HOH B 2 502 27 HOH HOH . I 4 HOH B 3 503 75 HOH HOH . I 4 HOH B 4 504 14 HOH HOH . I 4 HOH B 5 505 36 HOH HOH . I 4 HOH B 6 506 60 HOH HOH . I 4 HOH B 7 507 49 HOH HOH . I 4 HOH B 8 508 32 HOH HOH . I 4 HOH B 9 509 95 HOH HOH . I 4 HOH B 10 510 104 HOH HOH . I 4 HOH B 11 511 84 HOH HOH . I 4 HOH B 12 512 80 HOH HOH . I 4 HOH B 13 513 31 HOH HOH . I 4 HOH B 14 514 17 HOH HOH . I 4 HOH B 15 515 68 HOH HOH . I 4 HOH B 16 516 19 HOH HOH . I 4 HOH B 17 517 79 HOH HOH . I 4 HOH B 18 518 16 HOH HOH . I 4 HOH B 19 519 12 HOH HOH . I 4 HOH B 20 520 102 HOH HOH . I 4 HOH B 21 521 76 HOH HOH . I 4 HOH B 22 522 20 HOH HOH . J 4 HOH C 1 601 59 HOH HOH . J 4 HOH C 2 602 44 HOH HOH . J 4 HOH C 3 603 40 HOH HOH . J 4 HOH C 4 604 89 HOH HOH . J 4 HOH C 5 605 99 HOH HOH . J 4 HOH C 6 606 62 HOH HOH . J 4 HOH C 7 607 73 HOH HOH . J 4 HOH C 8 608 86 HOH HOH . J 4 HOH C 9 609 58 HOH HOH . J 4 HOH C 10 610 1 HOH HOH . J 4 HOH C 11 611 101 HOH HOH . J 4 HOH C 12 612 39 HOH HOH . J 4 HOH C 13 613 10 HOH HOH . J 4 HOH C 14 614 63 HOH HOH . J 4 HOH C 15 615 97 HOH HOH . J 4 HOH C 16 616 105 HOH HOH . J 4 HOH C 17 617 54 HOH HOH . J 4 HOH C 18 618 9 HOH HOH . J 4 HOH C 19 619 74 HOH HOH . J 4 HOH C 20 620 56 HOH HOH . J 4 HOH C 21 621 15 HOH HOH . J 4 HOH C 22 622 100 HOH HOH . J 4 HOH C 23 623 3 HOH HOH . J 4 HOH C 24 624 2 HOH HOH . K 4 HOH D 1 501 29 HOH HOH . K 4 HOH D 2 502 11 HOH HOH . K 4 HOH D 3 503 55 HOH HOH . K 4 HOH D 4 504 85 HOH HOH . K 4 HOH D 5 505 48 HOH HOH . K 4 HOH D 6 506 35 HOH HOH . K 4 HOH D 7 507 96 HOH HOH . K 4 HOH D 8 508 21 HOH HOH . K 4 HOH D 9 509 72 HOH HOH . K 4 HOH D 10 510 82 HOH HOH . K 4 HOH D 11 511 88 HOH HOH . K 4 HOH D 12 512 42 HOH HOH . K 4 HOH D 13 513 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . G 2 12.918 42.085 -31.799 0.78 49.09 ? N TRP 502 C 1 HETATM 2 C CA TRP . . . G 2 13.502 43.139 -30.973 0.78 54.34 ? CA TRP 502 C 1 HETATM 3 C C TRP . . . G 2 14.057 44.239 -31.876 0.78 55.33 ? C TRP 502 C 1 HETATM 4 O O TRP . . . G 2 14.078 44.07 -33.111 0.78 53.07 -1 O TRP 502 C 1 HETATM 5 C CB TRP . . . G 2 14.579 42.564 -30.037 0.78 57.25 ? CB TRP 502 C 1 HETATM 6 C CG TRP . . . G 2 15.592 41.718 -30.788 0.78 58.22 ? CG TRP 502 C 1 HETATM 7 C CD1 TRP . . . G 2 15.533 40.361 -31.014 0.78 57.81 ? CD1 TRP 502 C 1 HETATM 8 C CD2 TRP . . . G 2 16.755 42.213 -31.387 0.78 58.34 ? CD2 TRP 502 C 1 HETATM 9 N NE1 TRP . . . G 2 16.606 40.035 -31.719 0.78 60.17 ? NE1 TRP 502 C 1 HETATM 10 C CE2 TRP . . . G 2 17.363 41.139 -31.961 0.78 59.93 ? CE2 TRP 502 C 1 HETATM 11 C CE3 TRP . . . G 2 17.322 43.505 -31.474 0.78 56.77 ? CE3 TRP 502 C 1 HETATM 12 C CZ2 TRP . . . G 2 18.576 41.317 -32.656 0.78 57.48 ? CZ2 TRP 502 C 1 HETATM 13 C CZ3 TRP . . . G 2 18.505 43.686 -32.153 0.78 58.27 ? CZ3 TRP 502 C 1 HETATM 14 C CH2 TRP . . . G 2 19.115 42.587 -32.727 0.78 55.04 ? CH2 TRP 502 C 1 HETATM 15 O OXT TRP . . . G 2 14.492 45.309 -31.392 0.78 56.7 ? OXT TRP 502 C 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 15 #