data_8DCH
#
_model_server_result.job_id            zL3NZm5MQqnJEk1nio3BJw 
_model_server_result.datetime_utc      '2024-11-14 17:40:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8dch 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":102}' 
#
_entry.id    8DCH 
#
_exptl.entry_id    8DCH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8DCH 
_cell.length_a            56.659 
_cell.length_b            56.659 
_cell.length_c            78.155 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DCH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 215 n n 
C1 C2 GOL sing 216 n n 
C1 H11 GOL sing 217 n n 
C1 H12 GOL sing 218 n n 
O1 HO1 GOL sing 219 n n 
C2 O2 GOL sing 220 n n 
C2 C3 GOL sing 221 n n 
C2 H2 GOL sing 222 n n 
O2 HO2 GOL sing 223 n n 
C3 O3 GOL sing 224 n n 
C3 H31 GOL sing 225 n n 
C3 H32 GOL sing 226 n n 
O3 HO3 GOL sing 227 n n 
#
_atom_sites.entry_id                     8DCH 
_atom_sites.fract_transf_matrix[1][1]    0.017649 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017649 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012795 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 G52 A 1 201 201 G52 G52 . 
D 3 CL A 1 202 202 CL CL . 
E 3 CL B 1 101 101 CL CL . 
F 4 GOL B 1 102 102 GOL GOL . 
G 5 HOH A 1 301 301 HOH HOH . 
G 5 HOH A 2 302 302 HOH HOH . 
G 5 HOH A 3 303 303 HOH HOH . 
G 5 HOH A 4 304 304 HOH HOH . 
G 5 HOH A 5 305 305 HOH HOH . 
G 5 HOH A 6 306 306 HOH HOH . 
G 5 HOH A 7 307 307 HOH HOH . 
G 5 HOH A 8 308 308 HOH HOH . 
G 5 HOH A 9 309 309 HOH HOH . 
G 5 HOH A 10 310 310 HOH HOH . 
G 5 HOH A 11 311 311 HOH HOH . 
G 5 HOH A 12 312 312 HOH HOH . 
G 5 HOH A 13 313 313 HOH HOH . 
G 5 HOH A 14 314 314 HOH HOH . 
G 5 HOH A 15 315 315 HOH HOH . 
G 5 HOH A 16 316 316 HOH HOH . 
G 5 HOH A 17 317 317 HOH HOH . 
G 5 HOH A 18 318 318 HOH HOH . 
G 5 HOH A 19 319 319 HOH HOH . 
G 5 HOH A 20 320 320 HOH HOH . 
G 5 HOH A 21 321 321 HOH HOH . 
G 5 HOH A 22 322 322 HOH HOH . 
G 5 HOH A 23 323 323 HOH HOH . 
G 5 HOH A 24 324 324 HOH HOH . 
G 5 HOH A 25 325 325 HOH HOH . 
G 5 HOH A 26 326 326 HOH HOH . 
G 5 HOH A 27 327 327 HOH HOH . 
G 5 HOH A 28 328 328 HOH HOH . 
G 5 HOH A 29 329 329 HOH HOH . 
G 5 HOH A 30 330 330 HOH HOH . 
G 5 HOH A 31 331 331 HOH HOH . 
G 5 HOH A 32 332 332 HOH HOH . 
G 5 HOH A 33 333 333 HOH HOH . 
G 5 HOH A 34 334 334 HOH HOH . 
G 5 HOH A 35 335 335 HOH HOH . 
G 5 HOH A 36 336 336 HOH HOH . 
G 5 HOH A 37 337 337 HOH HOH . 
G 5 HOH A 38 338 338 HOH HOH . 
G 5 HOH A 39 339 339 HOH HOH . 
G 5 HOH A 40 340 340 HOH HOH . 
G 5 HOH A 41 341 341 HOH HOH . 
G 5 HOH A 42 342 342 HOH HOH . 
G 5 HOH A 43 343 343 HOH HOH . 
G 5 HOH A 44 344 344 HOH HOH . 
G 5 HOH A 45 345 345 HOH HOH . 
G 5 HOH A 46 346 346 HOH HOH . 
G 5 HOH A 47 347 347 HOH HOH . 
G 5 HOH A 48 348 348 HOH HOH . 
G 5 HOH A 49 349 349 HOH HOH . 
G 5 HOH A 50 350 350 HOH HOH . 
G 5 HOH A 51 351 351 HOH HOH . 
G 5 HOH A 52 352 352 HOH HOH . 
G 5 HOH A 53 353 353 HOH HOH . 
G 5 HOH A 54 354 354 HOH HOH . 
G 5 HOH A 55 355 355 HOH HOH . 
G 5 HOH A 56 356 356 HOH HOH . 
G 5 HOH A 57 357 357 HOH HOH . 
G 5 HOH A 58 358 358 HOH HOH . 
G 5 HOH A 59 359 359 HOH HOH . 
G 5 HOH A 60 360 360 HOH HOH . 
G 5 HOH A 61 361 361 HOH HOH . 
G 5 HOH A 62 362 362 HOH HOH . 
G 5 HOH A 63 363 363 HOH HOH . 
G 5 HOH A 64 364 364 HOH HOH . 
G 5 HOH A 65 365 365 HOH HOH . 
G 5 HOH A 66 366 366 HOH HOH . 
G 5 HOH A 67 367 367 HOH HOH . 
G 5 HOH A 68 368 368 HOH HOH . 
G 5 HOH A 69 369 369 HOH HOH . 
G 5 HOH A 70 370 370 HOH HOH . 
G 5 HOH A 71 371 371 HOH HOH . 
G 5 HOH A 72 372 372 HOH HOH . 
G 5 HOH A 73 373 373 HOH HOH . 
G 5 HOH A 74 374 374 HOH HOH . 
G 5 HOH A 75 375 375 HOH HOH . 
G 5 HOH A 76 376 376 HOH HOH . 
G 5 HOH A 77 377 377 HOH HOH . 
G 5 HOH A 78 378 378 HOH HOH . 
G 5 HOH A 79 379 379 HOH HOH . 
G 5 HOH A 80 380 380 HOH HOH . 
G 5 HOH A 81 381 381 HOH HOH . 
G 5 HOH A 82 382 382 HOH HOH . 
G 5 HOH A 83 383 383 HOH HOH . 
G 5 HOH A 84 384 384 HOH HOH . 
G 5 HOH A 85 385 385 HOH HOH . 
G 5 HOH A 86 386 386 HOH HOH . 
G 5 HOH A 87 387 387 HOH HOH . 
G 5 HOH A 88 388 388 HOH HOH . 
G 5 HOH A 89 389 389 HOH HOH . 
G 5 HOH A 90 390 390 HOH HOH . 
G 5 HOH A 91 391 391 HOH HOH . 
G 5 HOH A 92 392 392 HOH HOH . 
G 5 HOH A 93 393 393 HOH HOH . 
G 5 HOH A 94 394 394 HOH HOH . 
G 5 HOH A 95 395 395 HOH HOH . 
G 5 HOH A 96 396 396 HOH HOH . 
G 5 HOH A 97 397 397 HOH HOH . 
G 5 HOH A 98 398 398 HOH HOH . 
G 5 HOH A 99 399 399 HOH HOH . 
G 5 HOH A 100 400 400 HOH HOH . 
G 5 HOH A 101 401 401 HOH HOH . 
G 5 HOH A 102 402 402 HOH HOH . 
G 5 HOH A 103 403 403 HOH HOH . 
G 5 HOH A 104 404 404 HOH HOH . 
G 5 HOH A 105 405 405 HOH HOH . 
G 5 HOH A 106 406 406 HOH HOH . 
G 5 HOH A 107 407 407 HOH HOH . 
G 5 HOH A 108 408 408 HOH HOH . 
H 5 HOH B 1 201 201 HOH HOH . 
H 5 HOH B 2 202 202 HOH HOH . 
H 5 HOH B 3 203 203 HOH HOH . 
H 5 HOH B 4 204 204 HOH HOH . 
H 5 HOH B 5 205 205 HOH HOH . 
H 5 HOH B 6 206 206 HOH HOH . 
H 5 HOH B 7 207 207 HOH HOH . 
H 5 HOH B 8 208 208 HOH HOH . 
H 5 HOH B 9 209 209 HOH HOH . 
H 5 HOH B 10 210 210 HOH HOH . 
H 5 HOH B 11 211 211 HOH HOH . 
H 5 HOH B 12 212 212 HOH HOH . 
H 5 HOH B 13 213 213 HOH HOH . 
H 5 HOH B 14 214 214 HOH HOH . 
H 5 HOH B 15 215 215 HOH HOH . 
H 5 HOH B 16 216 216 HOH HOH . 
H 5 HOH B 17 217 217 HOH HOH . 
H 5 HOH B 18 218 218 HOH HOH . 
H 5 HOH B 19 219 219 HOH HOH . 
H 5 HOH B 20 220 220 HOH HOH . 
H 5 HOH B 21 221 221 HOH HOH . 
H 5 HOH B 22 222 222 HOH HOH . 
H 5 HOH B 23 223 223 HOH HOH . 
H 5 HOH B 24 224 224 HOH HOH . 
H 5 HOH B 25 225 225 HOH HOH . 
H 5 HOH B 26 226 226 HOH HOH . 
H 5 HOH B 27 227 227 HOH HOH . 
H 5 HOH B 28 228 228 HOH HOH . 
H 5 HOH B 29 229 229 HOH HOH . 
H 5 HOH B 30 230 230 HOH HOH . 
H 5 HOH B 31 231 231 HOH HOH . 
H 5 HOH B 32 232 232 HOH HOH . 
H 5 HOH B 33 233 233 HOH HOH . 
H 5 HOH B 34 234 234 HOH HOH . 
H 5 HOH B 35 235 235 HOH HOH . 
H 5 HOH B 36 236 236 HOH HOH . 
H 5 HOH B 37 237 237 HOH HOH . 
H 5 HOH B 38 238 238 HOH HOH . 
H 5 HOH B 39 239 239 HOH HOH . 
H 5 HOH B 40 240 240 HOH HOH . 
H 5 HOH B 41 241 241 HOH HOH . 
H 5 HOH B 42 242 242 HOH HOH . 
H 5 HOH B 43 243 243 HOH HOH . 
H 5 HOH B 44 244 244 HOH HOH . 
H 5 HOH B 45 245 245 HOH HOH . 
H 5 HOH B 46 246 246 HOH HOH . 
H 5 HOH B 47 247 247 HOH HOH . 
H 5 HOH B 48 248 248 HOH HOH . 
H 5 HOH B 49 249 249 HOH HOH . 
H 5 HOH B 50 250 250 HOH HOH . 
H 5 HOH B 51 251 251 HOH HOH . 
H 5 HOH B 52 252 252 HOH HOH . 
H 5 HOH B 53 253 253 HOH HOH . 
H 5 HOH B 54 254 254 HOH HOH . 
H 5 HOH B 55 255 255 HOH HOH . 
H 5 HOH B 56 256 256 HOH HOH . 
H 5 HOH B 57 257 257 HOH HOH . 
H 5 HOH B 58 258 258 HOH HOH . 
H 5 HOH B 59 259 259 HOH HOH . 
H 5 HOH B 60 260 260 HOH HOH . 
H 5 HOH B 61 261 261 HOH HOH . 
H 5 HOH B 62 262 262 HOH HOH . 
H 5 HOH B 63 263 263 HOH HOH . 
H 5 HOH B 64 264 264 HOH HOH . 
H 5 HOH B 65 265 265 HOH HOH . 
H 5 HOH B 66 266 266 HOH HOH . 
H 5 HOH B 67 267 267 HOH HOH . 
H 5 HOH B 68 268 268 HOH HOH . 
H 5 HOH B 69 269 269 HOH HOH . 
H 5 HOH B 70 270 270 HOH HOH . 
H 5 HOH B 71 271 271 HOH HOH . 
H 5 HOH B 72 272 272 HOH HOH . 
H 5 HOH B 73 273 273 HOH HOH . 
H 5 HOH B 74 274 274 HOH HOH . 
H 5 HOH B 75 275 275 HOH HOH . 
H 5 HOH B 76 276 276 HOH HOH . 
H 5 HOH B 77 277 277 HOH HOH . 
H 5 HOH B 78 278 278 HOH HOH . 
H 5 HOH B 79 279 279 HOH HOH . 
H 5 HOH B 80 280 280 HOH HOH . 
H 5 HOH B 81 281 281 HOH HOH . 
H 5 HOH B 82 282 282 HOH HOH . 
H 5 HOH B 83 283 283 HOH HOH . 
H 5 HOH B 84 284 284 HOH HOH . 
H 5 HOH B 85 285 285 HOH HOH . 
H 5 HOH B 86 286 286 HOH HOH . 
H 5 HOH B 87 287 287 HOH HOH . 
H 5 HOH B 88 288 288 HOH HOH . 
H 5 HOH B 89 289 289 HOH HOH . 
H 5 HOH B 90 290 290 HOH HOH . 
H 5 HOH B 91 291 291 HOH HOH . 
H 5 HOH B 92 292 292 HOH HOH . 
H 5 HOH B 93 293 293 HOH HOH . 
H 5 HOH B 94 294 294 HOH HOH . 
H 5 HOH B 95 295 295 HOH HOH . 
H 5 HOH B 96 296 296 HOH HOH . 
H 5 HOH B 97 297 297 HOH HOH . 
H 5 HOH B 98 298 298 HOH HOH . 
H 5 HOH B 99 299 299 HOH HOH . 
H 5 HOH B 100 300 300 HOH HOH . 
H 5 HOH B 101 301 301 HOH HOH . 
H 5 HOH B 102 302 302 HOH HOH . 
H 5 HOH B 103 303 303 HOH HOH . 
H 5 HOH B 104 304 304 HOH HOH . 
H 5 HOH B 105 305 305 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . A . F 4 -7.828 14.815 -25.421 0.5 37.12 ? C1 GOL 102 B 1 
HETATM 2 O O1 GOL . A . F 4 -7.408 15.976 -26.103 0.5 40.56 ? O1 GOL 102 B 1 
HETATM 3 C C2 GOL . A . F 4 -7.13 13.527 -25.808 0.5 41.72 ? C2 GOL 102 B 1 
HETATM 4 O O2 GOL . A . F 4 -7.108 12.716 -24.629 0.5 47.99 ? O2 GOL 102 B 1 
HETATM 5 C C3 GOL . A . F 4 -5.734 13.775 -26.357 0.5 46.1 ? C3 GOL 102 B 1 
HETATM 6 O O3 GOL . A . F 4 -4.905 12.609 -26.227 0.5 48.75 ? O3 GOL 102 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#