data_8DIV # _model_server_result.job_id wK4k6dVQRVjDRC1DLx2Qxw _model_server_result.datetime_utc '2024-11-26 16:11:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8div # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1301}' # _entry.id 8DIV # _exptl.entry_id 8DIV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DIV _cell.length_a 124.578 _cell.length_b 124.578 _cell.length_c 190.927 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DIV _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall 'I 4 2' _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -124.578 -124.578 0 3 'crystal symmetry operation' 3_455 -y-1,x,z 0 -1 0 1 0 0 0 0 1 -124.578 0 0 4 'crystal symmetry operation' 4_545 y,-x-1,z 0 1 0 -1 0 0 0 0 1 0 -124.578 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8DIV _atom_sites.fract_transf_matrix[1][1] 0.008027 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005238 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BGC A 1 1301 1301 BGC BGC . C 3 PX4 A 1 1302 1 PX4 PX4 . D 3 PX4 A 1 1303 2 PX4 PX4 . E 3 PX4 A 1 1304 3 PX4 PX4 . F 3 PX4 A 1 1305 4 PX4 PX4 . G 3 PX4 A 1 1306 5 PX4 PX4 . H 4 CPS A 1 1307 1 CPS CPS . I 4 CPS A 1 1308 2 CPS CPS . J 5 HOH A 1 1401 23 HOH HOH . J 5 HOH A 2 1402 4 HOH HOH . J 5 HOH A 3 1403 3 HOH HOH . J 5 HOH A 4 1404 22 HOH HOH . J 5 HOH A 5 1405 2 HOH HOH . J 5 HOH A 6 1406 16 HOH HOH . J 5 HOH A 7 1407 19 HOH HOH . J 5 HOH A 8 1408 14 HOH HOH . J 5 HOH A 9 1409 11 HOH HOH . J 5 HOH A 10 1410 9 HOH HOH . J 5 HOH A 11 1411 17 HOH HOH . J 5 HOH A 12 1412 6 HOH HOH . J 5 HOH A 13 1413 1 HOH HOH . J 5 HOH A 14 1414 15 HOH HOH . J 5 HOH A 15 1415 7 HOH HOH . J 5 HOH A 16 1416 8 HOH HOH . J 5 HOH A 17 1417 21 HOH HOH . J 5 HOH A 18 1418 20 HOH HOH . J 5 HOH A 19 1419 5 HOH HOH . J 5 HOH A 20 1420 18 HOH HOH . J 5 HOH A 21 1421 12 HOH HOH . J 5 HOH A 22 1422 10 HOH HOH . J 5 HOH A 23 1423 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . B 2 -15.499 -47.839 -59.219 1 106.66 ? C2 BGC 1301 A 1 HETATM 2 C C3 BGC . . . B 2 -15.602 -46.842 -58.069 1 93.72 ? C3 BGC 1301 A 1 HETATM 3 C C4 BGC . . . B 2 -16.672 -47.35 -57.113 1 95.99 ? C4 BGC 1301 A 1 HETATM 4 C C5 BGC . . . B 2 -16.162 -48.678 -56.58 1 95.47 ? C5 BGC 1301 A 1 HETATM 5 C C6 BGC . . . B 2 -16.941 -49.157 -55.361 1 91.23 ? C6 BGC 1301 A 1 HETATM 6 C C1 BGC . . . B 2 -15.322 -49.288 -58.729 1 108.98 ? C1 BGC 1301 A 1 HETATM 7 O O1 BGC . . . B 2 -15.55 -50.209 -59.804 1 95.47 ? O1 BGC 1301 A 1 HETATM 8 O O2 BGC . . . B 2 -14.404 -47.465 -60.07 1 119.43 ? O2 BGC 1301 A 1 HETATM 9 O O3 BGC . . . B 2 -15.912 -45.534 -58.567 1 89.37 ? O3 BGC 1301 A 1 HETATM 10 O O4 BGC . . . B 2 -16.912 -46.443 -56.034 1 102.82 ? O4 BGC 1301 A 1 HETATM 11 O O5 BGC . . . B 2 -16.197 -49.633 -57.643 1 95.12 ? O5 BGC 1301 A 1 HETATM 12 O O6 BGC . . . B 2 -16.041 -49.876 -54.506 1 87.08 ? O6 BGC 1301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #