data_8DJH # _model_server_result.job_id wpGWFIfYNFOd0pz4NK670Q _model_server_result.datetime_utc '2024-12-26 23:18:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8djh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":104}' # _entry.id 8DJH # _exptl.entry_id 8DJH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DJH _cell.length_a 37.776 _cell.length_b 47.46 _cell.length_c 63.632 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DJH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 11 A GLU 11 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc2 A OD1 ASP 15 A ASP 15 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc3 A OE2 GLU 33 A GLU 33 1_555 E ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc4 A NE2 HIS 35 A HIS 35 1_555 E ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc5 A NE2 HIS 43 A HIS 43 1_555 D ZN ZN . A ZN 102 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc6 A OE2 GLU 84 A GLU 84 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc7 A OE1 GLU 85 A GLU 85 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc8 A OD1 ASP 86 A ASP 86 1_555 F ZN ZN . A ZN 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc9 C ZN ZN . A ZN 101 1_555 B OD1 ASP 17 B ASP 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc10 D ZN ZN . A ZN 102 1_555 G O HOH . A HOH 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc11 E ZN ZN . A ZN 103 1_555 B OE1 GLU 9 B GLU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc12 E ZN ZN . A ZN 103 1_555 B OE2 GLU 9 B GLU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc13 E ZN ZN . A ZN 103 1_555 H O HOH . B HOH 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc14 F ZN ZN . A ZN 104 1_555 G O HOH . A HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc15 F ZN ZN . A ZN 104 1_555 G O HOH . A HOH 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc16 F ZN ZN . A ZN 104 1_555 G O HOH . A HOH 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc17 F ZN ZN . A ZN 104 1_555 G O HOH . A HOH 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc18 F ZN ZN . A ZN 104 1_555 G O HOH . A HOH 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8DJH _atom_sites.fract_transf_matrix[1][1] 0.026472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02107 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015715 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 101 1 ZN ZN . D 3 ZN A 1 102 2 ZN ZN . E 3 ZN A 1 103 3 ZN ZN . F 3 ZN A 1 104 4 ZN ZN . G 4 HOH A 1 201 53 HOH HOH . G 4 HOH A 2 202 119 HOH HOH . G 4 HOH A 3 203 60 HOH HOH . G 4 HOH A 4 204 45 HOH HOH . G 4 HOH A 5 205 57 HOH HOH . G 4 HOH A 6 206 36 HOH HOH . G 4 HOH A 7 207 131 HOH HOH . G 4 HOH A 8 208 28 HOH HOH . G 4 HOH A 9 209 58 HOH HOH . G 4 HOH A 10 210 41 HOH HOH . G 4 HOH A 11 211 96 HOH HOH . G 4 HOH A 12 212 8 HOH HOH . G 4 HOH A 13 213 34 HOH HOH . G 4 HOH A 14 214 109 HOH HOH . G 4 HOH A 15 215 37 HOH HOH . G 4 HOH A 16 216 12 HOH HOH . G 4 HOH A 17 217 18 HOH HOH . G 4 HOH A 18 218 26 HOH HOH . G 4 HOH A 19 219 98 HOH HOH . G 4 HOH A 20 220 5 HOH HOH . G 4 HOH A 21 221 126 HOH HOH . G 4 HOH A 22 222 30 HOH HOH . G 4 HOH A 23 223 20 HOH HOH . G 4 HOH A 24 224 46 HOH HOH . G 4 HOH A 25 225 13 HOH HOH . G 4 HOH A 26 226 32 HOH HOH . G 4 HOH A 27 227 14 HOH HOH . G 4 HOH A 28 228 72 HOH HOH . G 4 HOH A 29 229 23 HOH HOH . G 4 HOH A 30 230 31 HOH HOH . G 4 HOH A 31 231 97 HOH HOH . G 4 HOH A 32 232 55 HOH HOH . G 4 HOH A 33 233 128 HOH HOH . G 4 HOH A 34 234 111 HOH HOH . G 4 HOH A 35 235 11 HOH HOH . G 4 HOH A 36 236 67 HOH HOH . G 4 HOH A 37 237 110 HOH HOH . G 4 HOH A 38 238 74 HOH HOH . G 4 HOH A 39 239 66 HOH HOH . G 4 HOH A 40 240 48 HOH HOH . G 4 HOH A 41 241 27 HOH HOH . G 4 HOH A 42 242 16 HOH HOH . G 4 HOH A 43 243 21 HOH HOH . G 4 HOH A 44 244 2 HOH HOH . G 4 HOH A 45 245 59 HOH HOH . G 4 HOH A 46 246 68 HOH HOH . G 4 HOH A 47 247 4 HOH HOH . G 4 HOH A 48 248 35 HOH HOH . G 4 HOH A 49 249 1 HOH HOH . G 4 HOH A 50 250 82 HOH HOH . G 4 HOH A 51 251 62 HOH HOH . G 4 HOH A 52 252 40 HOH HOH . G 4 HOH A 53 253 88 HOH HOH . G 4 HOH A 54 254 122 HOH HOH . G 4 HOH A 55 255 17 HOH HOH . G 4 HOH A 56 256 10 HOH HOH . G 4 HOH A 57 257 38 HOH HOH . G 4 HOH A 58 258 25 HOH HOH . G 4 HOH A 59 259 125 HOH HOH . G 4 HOH A 60 260 118 HOH HOH . G 4 HOH A 61 261 84 HOH HOH . G 4 HOH A 62 262 7 HOH HOH . G 4 HOH A 63 263 39 HOH HOH . G 4 HOH A 64 264 117 HOH HOH . G 4 HOH A 65 265 91 HOH HOH . G 4 HOH A 66 266 134 HOH HOH . G 4 HOH A 67 267 3 HOH HOH . G 4 HOH A 68 268 42 HOH HOH . G 4 HOH A 69 269 69 HOH HOH . G 4 HOH A 70 270 90 HOH HOH . G 4 HOH A 71 271 127 HOH HOH . G 4 HOH A 72 272 71 HOH HOH . G 4 HOH A 73 273 103 HOH HOH . G 4 HOH A 74 274 120 HOH HOH . G 4 HOH A 75 275 56 HOH HOH . G 4 HOH A 76 276 135 HOH HOH . G 4 HOH A 77 277 106 HOH HOH . G 4 HOH A 78 278 101 HOH HOH . G 4 HOH A 79 279 94 HOH HOH . G 4 HOH A 80 280 52 HOH HOH . G 4 HOH A 81 281 64 HOH HOH . G 4 HOH A 82 282 78 HOH HOH . G 4 HOH A 83 283 89 HOH HOH . G 4 HOH A 84 284 83 HOH HOH . G 4 HOH A 85 285 49 HOH HOH . G 4 HOH A 86 286 44 HOH HOH . G 4 HOH A 87 287 61 HOH HOH . G 4 HOH A 88 288 100 HOH HOH . G 4 HOH A 89 289 130 HOH HOH . G 4 HOH A 90 290 63 HOH HOH . G 4 HOH A 91 291 51 HOH HOH . G 4 HOH A 92 292 132 HOH HOH . G 4 HOH A 93 293 47 HOH HOH . G 4 HOH A 94 294 99 HOH HOH . G 4 HOH A 95 295 73 HOH HOH . G 4 HOH A 96 296 108 HOH HOH . G 4 HOH A 97 297 54 HOH HOH . G 4 HOH A 98 298 123 HOH HOH . G 4 HOH A 99 299 77 HOH HOH . G 4 HOH A 100 300 124 HOH HOH . G 4 HOH A 101 301 139 HOH HOH . G 4 HOH A 102 302 133 HOH HOH . H 4 HOH B 1 101 81 HOH HOH . H 4 HOH B 2 102 95 HOH HOH . H 4 HOH B 3 103 136 HOH HOH . H 4 HOH B 4 104 75 HOH HOH . H 4 HOH B 5 105 22 HOH HOH . H 4 HOH B 6 106 24 HOH HOH . H 4 HOH B 7 107 19 HOH HOH . H 4 HOH B 8 108 50 HOH HOH . H 4 HOH B 9 109 9 HOH HOH . H 4 HOH B 10 110 70 HOH HOH . H 4 HOH B 11 111 33 HOH HOH . H 4 HOH B 12 112 15 HOH HOH . H 4 HOH B 13 113 86 HOH HOH . H 4 HOH B 14 114 113 HOH HOH . H 4 HOH B 15 115 80 HOH HOH . H 4 HOH B 16 116 65 HOH HOH . H 4 HOH B 17 117 92 HOH HOH . H 4 HOH B 18 118 105 HOH HOH . H 4 HOH B 19 119 43 HOH HOH . H 4 HOH B 20 120 93 HOH HOH . H 4 HOH B 21 121 138 HOH HOH . H 4 HOH B 22 122 115 HOH HOH . H 4 HOH B 23 123 114 HOH HOH . H 4 HOH B 24 124 137 HOH HOH . H 4 HOH B 25 125 116 HOH HOH . H 4 HOH B 26 126 112 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 11.204 _atom_site.Cartn_y 13.492 _atom_site.Cartn_z 12.379 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 104 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #