data_8DJY
#
_model_server_result.job_id            R7QH5efmpAZFbM3HaymoPw 
_model_server_result.datetime_utc      '2024-11-14 13:37:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8djy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
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_entry.id    8DJY 
#
_exptl.entry_id    8DJY 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8DJY 
_cell.length_a            75.807 
_cell.length_b            75.807 
_cell.length_c            119.978 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 8DJY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    'P 62 2 (x,y,z+1/3)' 
_symmetry.space_group_name_H-M     'P 62 2 2' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 47 A HIS 41 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc2 A OE1 GLU 74 A GLU 80 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? 
metalc ? metalc3 A OD2 ASP 102 A ASP 108 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc4 A OD1 ASP 102 A ASP 108 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
metalc ? metalc5 A OE2 GLU 113 A GLU 119 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc6 A O ILE 114 A ILE 120 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
metalc ? metalc7 B O01 U3L . A U3L 201 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc8 B O14 U3L . A U3L 201 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc9 B N05 U3L . A U3L 201 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? 
metalc ? metalc10 B O01 U3L . A U3L 201 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc11 D MN MN . A MN 203 1_555 E O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? 
metalc ? metalc12 D MN MN . A MN 203 1_555 E O HOH . A HOH 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     8DJY 
_atom_sites.fract_transf_matrix[1][1]    0.013191 
_atom_sites.fract_transf_matrix[1][2]    0.007616 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015232 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008335 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 U3L A 1 201 1 U3L NN . 
C 3 MN A 1 202 301 MN MN . 
D 3 MN A 1 203 302 MN MN . 
E 4 HOH A 1 301 21 HOH HOH . 
E 4 HOH A 2 302 1 HOH HOH . 
E 4 HOH A 3 303 56 HOH HOH . 
E 4 HOH A 4 304 17 HOH HOH . 
E 4 HOH A 5 305 43 HOH HOH . 
E 4 HOH A 6 306 73 HOH HOH . 
E 4 HOH A 7 307 54 HOH HOH . 
E 4 HOH A 8 308 7 HOH HOH . 
E 4 HOH A 9 309 8 HOH HOH . 
E 4 HOH A 10 310 62 HOH HOH . 
E 4 HOH A 11 311 66 HOH HOH . 
E 4 HOH A 12 312 69 HOH HOH . 
E 4 HOH A 13 313 67 HOH HOH . 
E 4 HOH A 14 314 3 HOH HOH . 
E 4 HOH A 15 315 52 HOH HOH . 
E 4 HOH A 16 316 22 HOH HOH . 
E 4 HOH A 17 317 20 HOH HOH . 
E 4 HOH A 18 318 65 HOH HOH . 
E 4 HOH A 19 319 80 HOH HOH . 
E 4 HOH A 20 320 38 HOH HOH . 
E 4 HOH A 21 321 4 HOH HOH . 
E 4 HOH A 22 322 36 HOH HOH . 
E 4 HOH A 23 323 72 HOH HOH . 
E 4 HOH A 24 324 15 HOH HOH . 
E 4 HOH A 25 325 23 HOH HOH . 
E 4 HOH A 26 326 60 HOH HOH . 
E 4 HOH A 27 327 2 HOH HOH . 
E 4 HOH A 28 328 77 HOH HOH . 
E 4 HOH A 29 329 58 HOH HOH . 
E 4 HOH A 30 330 5 HOH HOH . 
E 4 HOH A 31 331 18 HOH HOH . 
E 4 HOH A 32 332 45 HOH HOH . 
E 4 HOH A 33 333 6 HOH HOH . 
E 4 HOH A 34 334 24 HOH HOH . 
E 4 HOH A 35 335 11 HOH HOH . 
E 4 HOH A 36 336 25 HOH HOH . 
E 4 HOH A 37 337 44 HOH HOH . 
E 4 HOH A 38 338 71 HOH HOH . 
E 4 HOH A 39 339 13 HOH HOH . 
E 4 HOH A 40 340 33 HOH HOH . 
E 4 HOH A 41 341 30 HOH HOH . 
E 4 HOH A 42 342 9 HOH HOH . 
E 4 HOH A 43 343 16 HOH HOH . 
E 4 HOH A 44 344 81 HOH HOH . 
E 4 HOH A 45 345 63 HOH HOH . 
E 4 HOH A 46 346 32 HOH HOH . 
E 4 HOH A 47 347 14 HOH HOH . 
E 4 HOH A 48 348 40 HOH HOH . 
E 4 HOH A 49 349 53 HOH HOH . 
E 4 HOH A 50 350 68 HOH HOH . 
E 4 HOH A 51 351 34 HOH HOH . 
E 4 HOH A 52 352 42 HOH HOH . 
E 4 HOH A 53 353 19 HOH HOH . 
E 4 HOH A 54 354 57 HOH HOH . 
E 4 HOH A 55 355 35 HOH HOH . 
E 4 HOH A 56 356 48 HOH HOH . 
E 4 HOH A 57 357 26 HOH HOH . 
E 4 HOH A 58 358 79 HOH HOH . 
E 4 HOH A 59 359 59 HOH HOH . 
E 4 HOH A 60 360 41 HOH HOH . 
E 4 HOH A 61 361 50 HOH HOH . 
E 4 HOH A 62 362 51 HOH HOH . 
E 4 HOH A 63 363 78 HOH HOH . 
E 4 HOH A 64 364 10 HOH HOH . 
E 4 HOH A 65 365 61 HOH HOH . 
E 4 HOH A 66 366 39 HOH HOH . 
E 4 HOH A 67 367 37 HOH HOH . 
E 4 HOH A 68 368 29 HOH HOH . 
E 4 HOH A 69 369 75 HOH HOH . 
E 4 HOH A 70 370 74 HOH HOH . 
E 4 HOH A 71 371 70 HOH HOH . 
E 4 HOH A 72 372 55 HOH HOH . 
E 4 HOH A 73 373 31 HOH HOH . 
E 4 HOH A 74 374 47 HOH HOH . 
E 4 HOH A 75 375 12 HOH HOH . 
E 4 HOH A 76 376 46 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               17.408 
_atom_site.Cartn_y               15.287 
_atom_site.Cartn_z               -12.631 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        60.31 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           203 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#