data_8DKN # _model_server_result.job_id tZAc3_s_XsWoQyrHL06luw _model_server_result.datetime_utc '2024-11-24 15:45:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dkn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":603}' # _entry.id 8DKN # _exptl.entry_id 8DKN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.317 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.79 _cell.angle_gamma 90 _cell.entry_id 8DKN _cell.length_a 83.208 _cell.length_b 81.89 _cell.length_c 48.146 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DKN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 81 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 313 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C03 _struct_conn.ptnr2_label_comp_id EEY _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id EEY _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.637 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C9 H19 N O3 S' _chem_comp.formula_weight 221.317 _chem_comp.id CXS _chem_comp.mon_nstd_flag . _chem_comp.name '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 CXS doub 70 n n S O2 CXS doub 71 n n S O3 CXS sing 72 n n S C1 CXS sing 73 n n O3 HO3 CXS sing 74 n n C1 C2 CXS sing 75 n n C1 H11 CXS sing 76 n n C1 H12 CXS sing 77 n n C2 C3 CXS sing 78 n n C2 H21 CXS sing 79 n n C2 H22 CXS sing 80 n n C3 N CXS sing 81 n n C3 H31 CXS sing 82 n n C3 H32 CXS sing 83 n n N C4 CXS sing 84 n n N HN CXS sing 85 n n C4 C5 CXS sing 86 n n C4 C9 CXS sing 87 n n C4 H4 CXS sing 88 n n C5 C6 CXS sing 89 n n C5 H51 CXS sing 90 n n C5 H52 CXS sing 91 n n C6 C7 CXS sing 92 n n C6 H61 CXS sing 93 n n C6 H62 CXS sing 94 n n C7 C8 CXS sing 95 n n C7 H71 CXS sing 96 n n C7 H72 CXS sing 97 n n C8 C9 CXS sing 98 n n C8 H81 CXS sing 99 n n C8 H82 CXS sing 100 n n C9 H91 CXS sing 101 n n C9 H92 CXS sing 102 n n # _atom_sites.entry_id 8DKN _atom_sites.fract_transf_matrix[1][1] 0.012018 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002949 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021386 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EEY A 1 601 1 EEY 199 . D 4 CXS A 1 602 2 CXS CAP . E 4 CXS A 1 603 3 CXS CAP . F 5 SO4 C 1 101 1 SO4 SO4 . G 6 HOH A 1 701 34 HOH HOH . G 6 HOH A 2 702 31 HOH HOH . G 6 HOH A 3 703 35 HOH HOH . G 6 HOH A 4 704 24 HOH HOH . G 6 HOH A 5 705 19 HOH HOH . G 6 HOH A 6 706 38 HOH HOH . G 6 HOH A 7 707 10 HOH HOH . G 6 HOH A 8 708 20 HOH HOH . G 6 HOH A 9 709 40 HOH HOH . G 6 HOH A 10 710 11 HOH HOH . G 6 HOH A 11 711 9 HOH HOH . G 6 HOH A 12 712 39 HOH HOH . G 6 HOH A 13 713 4 HOH HOH . G 6 HOH A 14 714 22 HOH HOH . G 6 HOH A 15 715 21 HOH HOH . G 6 HOH A 16 716 26 HOH HOH . G 6 HOH A 17 717 18 HOH HOH . G 6 HOH A 18 718 17 HOH HOH . G 6 HOH A 19 719 12 HOH HOH . G 6 HOH A 20 720 29 HOH HOH . G 6 HOH A 21 721 13 HOH HOH . G 6 HOH A 22 722 30 HOH HOH . G 6 HOH A 23 723 37 HOH HOH . G 6 HOH A 24 724 16 HOH HOH . G 6 HOH A 25 725 3 HOH HOH . G 6 HOH A 26 726 5 HOH HOH . G 6 HOH A 27 727 8 HOH HOH . G 6 HOH A 28 728 1 HOH HOH . G 6 HOH A 29 729 7 HOH HOH . G 6 HOH A 30 730 23 HOH HOH . G 6 HOH A 31 731 14 HOH HOH . G 6 HOH A 32 732 2 HOH HOH . G 6 HOH A 33 733 32 HOH HOH . G 6 HOH A 34 734 6 HOH HOH . G 6 HOH A 35 735 15 HOH HOH . G 6 HOH A 36 736 28 HOH HOH . G 6 HOH A 37 737 27 HOH HOH . G 6 HOH A 38 738 33 HOH HOH . G 6 HOH A 39 739 25 HOH HOH . H 6 HOH C 1 201 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S CXS . . . E 4 15.139 17.882 1.053 1 78.77 ? S CXS 603 A 1 HETATM 2 O O1 CXS . . . E 4 14.225 17.662 -0.025 1 67.2 ? O1 CXS 603 A 1 HETATM 3 O O2 CXS . . . E 4 15.347 19.497 1.178 1 85.37 ? O2 CXS 603 A 1 HETATM 4 O O3 CXS . . . E 4 14.6 17.248 2.219 1 87.66 ? O3 CXS 603 A 1 HETATM 5 C C1 CXS . . . E 4 16.661 17.259 0.862 1 72.92 ? C1 CXS 603 A 1 HETATM 6 C C2 CXS . . . E 4 16.538 15.906 0.2 1 67.47 ? C2 CXS 603 A 1 HETATM 7 C C3 CXS . . . E 4 17.763 15.086 0.555 1 61.77 ? C3 CXS 603 A 1 HETATM 8 N N CXS . . . E 4 18.254 14.489 -0.676 1 60.44 ? N CXS 603 A 1 HETATM 9 C C4 CXS . . . E 4 19.453 13.682 -0.441 1 57.41 ? C4 CXS 603 A 1 HETATM 10 C C5 CXS . . . E 4 20.281 13.861 -1.692 1 59.8 ? C5 CXS 603 A 1 HETATM 11 C C6 CXS . . . E 4 21.659 13.246 -1.433 1 59.3 ? C6 CXS 603 A 1 HETATM 12 C C7 CXS . . . E 4 21.457 11.755 -1.249 1 61.26 ? C7 CXS 603 A 1 HETATM 13 C C8 CXS . . . E 4 20.45 11.386 -0.145 1 59.2 ? C8 CXS 603 A 1 HETATM 14 C C9 CXS . . . E 4 19.154 12.192 -0.219 1 56.59 ? C9 CXS 603 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #