data_8DKV
#
_model_server_result.job_id            UfLPKX9dW9Pl8H_-GcrrSg 
_model_server_result.datetime_utc      '2024-11-15 10:23:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8dkv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":603}' 
#
_entry.id    8DKV 
#
_exptl.entry_id    8DKV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.317 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.06 
_cell.angle_gamma         90 
_cell.entry_id            8DKV 
_cell.length_a            83.16 
_cell.length_b            81.63 
_cell.length_c            48.01 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DKV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             81 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              313 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            C19 
_struct_conn.ptnr2_label_comp_id            SKL 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             SKL 
_struct_conn.ptnr2_auth_seq_id              601 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.668 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C9 H19 N O3 S' 
_chem_comp.formula_weight    221.317 
_chem_comp.id                CXS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 CXS doub 70 n n 
S O2 CXS doub 71 n n 
S O3 CXS sing 72 n n 
S C1 CXS sing 73 n n 
O3 HO3 CXS sing 74 n n 
C1 C2 CXS sing 75 n n 
C1 H11 CXS sing 76 n n 
C1 H12 CXS sing 77 n n 
C2 C3 CXS sing 78 n n 
C2 H21 CXS sing 79 n n 
C2 H22 CXS sing 80 n n 
C3 N CXS sing 81 n n 
C3 H31 CXS sing 82 n n 
C3 H32 CXS sing 83 n n 
N C4 CXS sing 84 n n 
N HN CXS sing 85 n n 
C4 C5 CXS sing 86 n n 
C4 C9 CXS sing 87 n n 
C4 H4 CXS sing 88 n n 
C5 C6 CXS sing 89 n n 
C5 H51 CXS sing 90 n n 
C5 H52 CXS sing 91 n n 
C6 C7 CXS sing 92 n n 
C6 H61 CXS sing 93 n n 
C6 H62 CXS sing 94 n n 
C7 C8 CXS sing 95 n n 
C7 H71 CXS sing 96 n n 
C7 H72 CXS sing 97 n n 
C8 C9 CXS sing 98 n n 
C8 H81 CXS sing 99 n n 
C8 H82 CXS sing 100 n n 
C9 H91 CXS sing 101 n n 
C9 H92 CXS sing 102 n n 
#
_atom_sites.entry_id                     8DKV 
_atom_sites.fract_transf_matrix[1][1]    0.012025 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003012 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01225 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021472 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SKL A 1 601 1 SKL H3B . 
D 4 CXS A 1 602 2 CXS CAP . 
E 4 CXS A 1 603 3 CXS CAP . 
F 5 SO4 A 1 604 1 SO4 SO4 . 
G 6 HOH A 1 701 195 HOH HOH . 
G 6 HOH A 2 702 211 HOH HOH . 
G 6 HOH A 3 703 212 HOH HOH . 
G 6 HOH A 4 704 144 HOH HOH . 
G 6 HOH A 5 705 17 HOH HOH . 
G 6 HOH A 6 706 81 HOH HOH . 
G 6 HOH A 7 707 21 HOH HOH . 
G 6 HOH A 8 708 29 HOH HOH . 
G 6 HOH A 9 709 33 HOH HOH . 
G 6 HOH A 10 710 119 HOH HOH . 
G 6 HOH A 11 711 12 HOH HOH . 
G 6 HOH A 12 712 138 HOH HOH . 
G 6 HOH A 13 713 78 HOH HOH . 
G 6 HOH A 14 714 194 HOH HOH . 
G 6 HOH A 15 715 206 HOH HOH . 
G 6 HOH A 16 716 3 HOH HOH . 
G 6 HOH A 17 717 104 HOH HOH . 
G 6 HOH A 18 718 40 HOH HOH . 
G 6 HOH A 19 719 72 HOH HOH . 
G 6 HOH A 20 720 35 HOH HOH . 
G 6 HOH A 21 721 75 HOH HOH . 
G 6 HOH A 22 722 214 HOH HOH . 
G 6 HOH A 23 723 59 HOH HOH . 
G 6 HOH A 24 724 217 HOH HOH . 
G 6 HOH A 25 725 9 HOH HOH . 
G 6 HOH A 26 726 179 HOH HOH . 
G 6 HOH A 27 727 137 HOH HOH . 
G 6 HOH A 28 728 151 HOH HOH . 
G 6 HOH A 29 729 175 HOH HOH . 
G 6 HOH A 30 730 51 HOH HOH . 
G 6 HOH A 31 731 69 HOH HOH . 
G 6 HOH A 32 732 201 HOH HOH . 
G 6 HOH A 33 733 70 HOH HOH . 
G 6 HOH A 34 734 16 HOH HOH . 
G 6 HOH A 35 735 41 HOH HOH . 
G 6 HOH A 36 736 43 HOH HOH . 
G 6 HOH A 37 737 190 HOH HOH . 
G 6 HOH A 38 738 49 HOH HOH . 
G 6 HOH A 39 739 139 HOH HOH . 
G 6 HOH A 40 740 6 HOH HOH . 
G 6 HOH A 41 741 157 HOH HOH . 
G 6 HOH A 42 742 55 HOH HOH . 
G 6 HOH A 43 743 20 HOH HOH . 
G 6 HOH A 44 744 50 HOH HOH . 
G 6 HOH A 45 745 26 HOH HOH . 
G 6 HOH A 46 746 23 HOH HOH . 
G 6 HOH A 47 747 10 HOH HOH . 
G 6 HOH A 48 748 182 HOH HOH . 
G 6 HOH A 49 749 152 HOH HOH . 
G 6 HOH A 50 750 18 HOH HOH . 
G 6 HOH A 51 751 34 HOH HOH . 
G 6 HOH A 52 752 146 HOH HOH . 
G 6 HOH A 53 753 30 HOH HOH . 
G 6 HOH A 54 754 209 HOH HOH . 
G 6 HOH A 55 755 143 HOH HOH . 
G 6 HOH A 56 756 142 HOH HOH . 
G 6 HOH A 57 757 2 HOH HOH . 
G 6 HOH A 58 758 180 HOH HOH . 
G 6 HOH A 59 759 68 HOH HOH . 
G 6 HOH A 60 760 11 HOH HOH . 
G 6 HOH A 61 761 80 HOH HOH . 
G 6 HOH A 62 762 57 HOH HOH . 
G 6 HOH A 63 763 19 HOH HOH . 
G 6 HOH A 64 764 32 HOH HOH . 
G 6 HOH A 65 765 113 HOH HOH . 
G 6 HOH A 66 766 14 HOH HOH . 
G 6 HOH A 67 767 24 HOH HOH . 
G 6 HOH A 68 768 187 HOH HOH . 
G 6 HOH A 69 769 39 HOH HOH . 
G 6 HOH A 70 770 118 HOH HOH . 
G 6 HOH A 71 771 184 HOH HOH . 
G 6 HOH A 72 772 199 HOH HOH . 
G 6 HOH A 73 773 31 HOH HOH . 
G 6 HOH A 74 774 102 HOH HOH . 
G 6 HOH A 75 775 71 HOH HOH . 
G 6 HOH A 76 776 89 HOH HOH . 
G 6 HOH A 77 777 105 HOH HOH . 
G 6 HOH A 78 778 116 HOH HOH . 
G 6 HOH A 79 779 87 HOH HOH . 
G 6 HOH A 80 780 110 HOH HOH . 
G 6 HOH A 81 781 63 HOH HOH . 
G 6 HOH A 82 782 86 HOH HOH . 
G 6 HOH A 83 783 83 HOH HOH . 
G 6 HOH A 84 784 56 HOH HOH . 
G 6 HOH A 85 785 7 HOH HOH . 
G 6 HOH A 86 786 64 HOH HOH . 
G 6 HOH A 87 787 92 HOH HOH . 
G 6 HOH A 88 788 25 HOH HOH . 
G 6 HOH A 89 789 176 HOH HOH . 
G 6 HOH A 90 790 37 HOH HOH . 
G 6 HOH A 91 791 5 HOH HOH . 
G 6 HOH A 92 792 15 HOH HOH . 
G 6 HOH A 93 793 193 HOH HOH . 
G 6 HOH A 94 794 58 HOH HOH . 
G 6 HOH A 95 795 79 HOH HOH . 
G 6 HOH A 96 796 96 HOH HOH . 
G 6 HOH A 97 797 207 HOH HOH . 
G 6 HOH A 98 798 22 HOH HOH . 
G 6 HOH A 99 799 66 HOH HOH . 
G 6 HOH A 100 800 108 HOH HOH . 
G 6 HOH A 101 801 45 HOH HOH . 
G 6 HOH A 102 802 140 HOH HOH . 
G 6 HOH A 103 803 52 HOH HOH . 
G 6 HOH A 104 804 150 HOH HOH . 
G 6 HOH A 105 805 47 HOH HOH . 
G 6 HOH A 106 806 88 HOH HOH . 
G 6 HOH A 107 807 191 HOH HOH . 
G 6 HOH A 108 808 101 HOH HOH . 
G 6 HOH A 109 809 54 HOH HOH . 
G 6 HOH A 110 810 93 HOH HOH . 
G 6 HOH A 111 811 60 HOH HOH . 
G 6 HOH A 112 812 38 HOH HOH . 
G 6 HOH A 113 813 153 HOH HOH . 
G 6 HOH A 114 814 156 HOH HOH . 
G 6 HOH A 115 815 181 HOH HOH . 
G 6 HOH A 116 816 91 HOH HOH . 
G 6 HOH A 117 817 73 HOH HOH . 
G 6 HOH A 118 818 109 HOH HOH . 
G 6 HOH A 119 819 61 HOH HOH . 
G 6 HOH A 120 820 106 HOH HOH . 
G 6 HOH A 121 821 36 HOH HOH . 
G 6 HOH A 122 822 98 HOH HOH . 
G 6 HOH A 123 823 205 HOH HOH . 
G 6 HOH A 124 824 121 HOH HOH . 
G 6 HOH A 125 825 208 HOH HOH . 
G 6 HOH A 126 826 46 HOH HOH . 
G 6 HOH A 127 827 177 HOH HOH . 
G 6 HOH A 128 828 178 HOH HOH . 
G 6 HOH A 129 829 95 HOH HOH . 
G 6 HOH A 130 830 117 HOH HOH . 
G 6 HOH A 131 831 111 HOH HOH . 
G 6 HOH A 132 832 65 HOH HOH . 
G 6 HOH A 133 833 48 HOH HOH . 
G 6 HOH A 134 834 62 HOH HOH . 
G 6 HOH A 135 835 82 HOH HOH . 
G 6 HOH A 136 836 147 HOH HOH . 
G 6 HOH A 137 837 85 HOH HOH . 
G 6 HOH A 138 838 202 HOH HOH . 
G 6 HOH A 139 839 76 HOH HOH . 
G 6 HOH A 140 840 167 HOH HOH . 
G 6 HOH A 141 841 122 HOH HOH . 
G 6 HOH A 142 842 149 HOH HOH . 
G 6 HOH A 143 843 218 HOH HOH . 
G 6 HOH A 144 844 99 HOH HOH . 
G 6 HOH A 145 845 90 HOH HOH . 
G 6 HOH A 146 846 216 HOH HOH . 
G 6 HOH A 147 847 192 HOH HOH . 
G 6 HOH A 148 848 94 HOH HOH . 
G 6 HOH A 149 849 128 HOH HOH . 
G 6 HOH A 150 850 219 HOH HOH . 
G 6 HOH A 151 851 42 HOH HOH . 
G 6 HOH A 152 852 171 HOH HOH . 
G 6 HOH A 153 853 132 HOH HOH . 
G 6 HOH A 154 854 125 HOH HOH . 
G 6 HOH A 155 855 126 HOH HOH . 
G 6 HOH A 156 856 103 HOH HOH . 
G 6 HOH A 157 857 107 HOH HOH . 
G 6 HOH A 158 858 115 HOH HOH . 
G 6 HOH A 159 859 183 HOH HOH . 
G 6 HOH A 160 860 213 HOH HOH . 
G 6 HOH A 161 861 114 HOH HOH . 
G 6 HOH A 162 862 67 HOH HOH . 
G 6 HOH A 163 863 160 HOH HOH . 
G 6 HOH A 164 864 84 HOH HOH . 
G 6 HOH A 165 865 74 HOH HOH . 
G 6 HOH A 166 866 196 HOH HOH . 
G 6 HOH A 167 867 161 HOH HOH . 
G 6 HOH A 168 868 136 HOH HOH . 
G 6 HOH A 169 869 198 HOH HOH . 
G 6 HOH A 170 870 173 HOH HOH . 
G 6 HOH A 171 871 120 HOH HOH . 
G 6 HOH A 172 872 220 HOH HOH . 
G 6 HOH A 173 873 189 HOH HOH . 
G 6 HOH A 174 874 204 HOH HOH . 
G 6 HOH A 175 875 159 HOH HOH . 
G 6 HOH A 176 876 131 HOH HOH . 
G 6 HOH A 177 877 8 HOH HOH . 
G 6 HOH A 178 878 221 HOH HOH . 
G 6 HOH A 179 879 154 HOH HOH . 
G 6 HOH A 180 880 174 HOH HOH . 
G 6 HOH A 181 881 130 HOH HOH . 
G 6 HOH A 182 882 203 HOH HOH . 
G 6 HOH A 183 883 129 HOH HOH . 
G 6 HOH A 184 884 127 HOH HOH . 
G 6 HOH A 185 885 77 HOH HOH . 
G 6 HOH A 186 886 163 HOH HOH . 
G 6 HOH A 187 887 185 HOH HOH . 
G 6 HOH A 188 888 112 HOH HOH . 
G 6 HOH A 189 889 133 HOH HOH . 
G 6 HOH A 190 890 155 HOH HOH . 
G 6 HOH A 191 891 186 HOH HOH . 
G 6 HOH A 192 892 123 HOH HOH . 
G 6 HOH A 193 893 164 HOH HOH . 
G 6 HOH A 194 894 170 HOH HOH . 
G 6 HOH A 195 895 158 HOH HOH . 
G 6 HOH A 196 896 165 HOH HOH . 
G 6 HOH A 197 897 135 HOH HOH . 
G 6 HOH A 198 898 169 HOH HOH . 
G 6 HOH A 199 899 145 HOH HOH . 
G 6 HOH A 200 900 124 HOH HOH . 
G 6 HOH A 201 902 166 HOH HOH . 
G 6 HOH A 202 903 172 HOH HOH . 
H 6 HOH C 1 101 1 HOH HOH . 
H 6 HOH C 2 102 13 HOH HOH . 
H 6 HOH C 3 103 100 HOH HOH . 
H 6 HOH C 4 104 28 HOH HOH . 
H 6 HOH C 5 105 4 HOH HOH . 
H 6 HOH C 6 106 188 HOH HOH . 
H 6 HOH C 7 107 44 HOH HOH . 
H 6 HOH C 8 108 53 HOH HOH . 
H 6 HOH C 9 109 200 HOH HOH . 
H 6 HOH C 10 110 222 HOH HOH . 
H 6 HOH C 11 111 27 HOH HOH . 
H 6 HOH C 12 112 215 HOH HOH . 
H 6 HOH C 13 113 148 HOH HOH . 
H 6 HOH C 14 114 210 HOH HOH . 
H 6 HOH C 15 115 141 HOH HOH . 
H 6 HOH C 16 116 168 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S CXS . . . E 4 14.544 16.828 0.203 1 43.22 ? S CXS 603 A 1 
HETATM 2 O O1 CXS . . . E 4 13.891 16.194 -1.032 1 53.69 ? O1 CXS 603 A 1 
HETATM 3 O O2 CXS . . . E 4 14.531 18.359 -0.044 1 47.86 ? O2 CXS 603 A 1 
HETATM 4 O O3 CXS . . . E 4 13.82 16.45 1.513 1 42.37 ? O3 CXS 603 A 1 
HETATM 5 C C1 CXS . . . E 4 16.309 16.487 0.562 1 49.72 ? C1 CXS 603 A 1 
HETATM 6 C C2 CXS . . . E 4 16.387 15.12 -0.014 1 43.4 ? C2 CXS 603 A 1 
HETATM 7 C C3 CXS . . . E 4 17.707 14.523 0.526 1 40.18 ? C3 CXS 603 A 1 
HETATM 8 N N CXS . . . E 4 18.302 14.002 -0.681 1 35.39 ? N CXS 603 A 1 
HETATM 9 C C4 CXS . . . E 4 19.553 13.203 -0.527 1 33.48 ? C4 CXS 603 A 1 
HETATM 10 C C5 CXS . . . E 4 20.306 13.237 -1.852 1 35.94 ? C5 CXS 603 A 1 
HETATM 11 C C6 CXS . . . E 4 21.65 12.54 -1.598 1 34.74 ? C6 CXS 603 A 1 
HETATM 12 C C7 CXS . . . E 4 21.346 11.115 -1.169 1 36.96 ? C7 CXS 603 A 1 
HETATM 13 C C8 CXS . . . E 4 20.604 11.117 0.115 1 32.12 ? C8 CXS 603 A 1 
HETATM 14 C C9 CXS . . . E 4 19.279 11.785 -0.183 1 32.74 ? C9 CXS 603 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           260 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           14 
#