data_8DKV # _model_server_result.job_id ORgowfXDrbBvkyhHChWdOw _model_server_result.datetime_utc '2024-11-15 10:44:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dkv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 8DKV # _exptl.entry_id 8DKV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.06 _cell.angle_gamma 90 _cell.entry_id 8DKV _cell.length_a 83.16 _cell.length_b 81.63 _cell.length_c 48.01 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DKV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 81 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 313 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C19 _struct_conn.ptnr2_label_comp_id SKL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SKL _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.668 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 369 n n S O2 SO4 doub 370 n n S O3 SO4 sing 371 n n S O4 SO4 sing 372 n n # _atom_sites.entry_id 8DKV _atom_sites.fract_transf_matrix[1][1] 0.012025 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003012 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01225 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021472 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SKL A 1 601 1 SKL H3B . D 4 CXS A 1 602 2 CXS CAP . E 4 CXS A 1 603 3 CXS CAP . F 5 SO4 A 1 604 1 SO4 SO4 . G 6 HOH A 1 701 195 HOH HOH . G 6 HOH A 2 702 211 HOH HOH . G 6 HOH A 3 703 212 HOH HOH . G 6 HOH A 4 704 144 HOH HOH . G 6 HOH A 5 705 17 HOH HOH . G 6 HOH A 6 706 81 HOH HOH . G 6 HOH A 7 707 21 HOH HOH . G 6 HOH A 8 708 29 HOH HOH . G 6 HOH A 9 709 33 HOH HOH . G 6 HOH A 10 710 119 HOH HOH . G 6 HOH A 11 711 12 HOH HOH . G 6 HOH A 12 712 138 HOH HOH . G 6 HOH A 13 713 78 HOH HOH . G 6 HOH A 14 714 194 HOH HOH . G 6 HOH A 15 715 206 HOH HOH . G 6 HOH A 16 716 3 HOH HOH . G 6 HOH A 17 717 104 HOH HOH . G 6 HOH A 18 718 40 HOH HOH . G 6 HOH A 19 719 72 HOH HOH . G 6 HOH A 20 720 35 HOH HOH . G 6 HOH A 21 721 75 HOH HOH . G 6 HOH A 22 722 214 HOH HOH . G 6 HOH A 23 723 59 HOH HOH . G 6 HOH A 24 724 217 HOH HOH . G 6 HOH A 25 725 9 HOH HOH . G 6 HOH A 26 726 179 HOH HOH . G 6 HOH A 27 727 137 HOH HOH . G 6 HOH A 28 728 151 HOH HOH . G 6 HOH A 29 729 175 HOH HOH . G 6 HOH A 30 730 51 HOH HOH . G 6 HOH A 31 731 69 HOH HOH . G 6 HOH A 32 732 201 HOH HOH . G 6 HOH A 33 733 70 HOH HOH . G 6 HOH A 34 734 16 HOH HOH . G 6 HOH A 35 735 41 HOH HOH . G 6 HOH A 36 736 43 HOH HOH . G 6 HOH A 37 737 190 HOH HOH . G 6 HOH A 38 738 49 HOH HOH . G 6 HOH A 39 739 139 HOH HOH . G 6 HOH A 40 740 6 HOH HOH . G 6 HOH A 41 741 157 HOH HOH . G 6 HOH A 42 742 55 HOH HOH . G 6 HOH A 43 743 20 HOH HOH . G 6 HOH A 44 744 50 HOH HOH . G 6 HOH A 45 745 26 HOH HOH . G 6 HOH A 46 746 23 HOH HOH . G 6 HOH A 47 747 10 HOH HOH . G 6 HOH A 48 748 182 HOH HOH . G 6 HOH A 49 749 152 HOH HOH . G 6 HOH A 50 750 18 HOH HOH . G 6 HOH A 51 751 34 HOH HOH . G 6 HOH A 52 752 146 HOH HOH . G 6 HOH A 53 753 30 HOH HOH . G 6 HOH A 54 754 209 HOH HOH . G 6 HOH A 55 755 143 HOH HOH . G 6 HOH A 56 756 142 HOH HOH . G 6 HOH A 57 757 2 HOH HOH . G 6 HOH A 58 758 180 HOH HOH . G 6 HOH A 59 759 68 HOH HOH . G 6 HOH A 60 760 11 HOH HOH . G 6 HOH A 61 761 80 HOH HOH . G 6 HOH A 62 762 57 HOH HOH . G 6 HOH A 63 763 19 HOH HOH . G 6 HOH A 64 764 32 HOH HOH . G 6 HOH A 65 765 113 HOH HOH . G 6 HOH A 66 766 14 HOH HOH . G 6 HOH A 67 767 24 HOH HOH . G 6 HOH A 68 768 187 HOH HOH . G 6 HOH A 69 769 39 HOH HOH . G 6 HOH A 70 770 118 HOH HOH . G 6 HOH A 71 771 184 HOH HOH . G 6 HOH A 72 772 199 HOH HOH . G 6 HOH A 73 773 31 HOH HOH . G 6 HOH A 74 774 102 HOH HOH . G 6 HOH A 75 775 71 HOH HOH . G 6 HOH A 76 776 89 HOH HOH . G 6 HOH A 77 777 105 HOH HOH . G 6 HOH A 78 778 116 HOH HOH . G 6 HOH A 79 779 87 HOH HOH . G 6 HOH A 80 780 110 HOH HOH . G 6 HOH A 81 781 63 HOH HOH . G 6 HOH A 82 782 86 HOH HOH . G 6 HOH A 83 783 83 HOH HOH . G 6 HOH A 84 784 56 HOH HOH . G 6 HOH A 85 785 7 HOH HOH . G 6 HOH A 86 786 64 HOH HOH . G 6 HOH A 87 787 92 HOH HOH . G 6 HOH A 88 788 25 HOH HOH . G 6 HOH A 89 789 176 HOH HOH . G 6 HOH A 90 790 37 HOH HOH . G 6 HOH A 91 791 5 HOH HOH . G 6 HOH A 92 792 15 HOH HOH . G 6 HOH A 93 793 193 HOH HOH . G 6 HOH A 94 794 58 HOH HOH . G 6 HOH A 95 795 79 HOH HOH . G 6 HOH A 96 796 96 HOH HOH . G 6 HOH A 97 797 207 HOH HOH . G 6 HOH A 98 798 22 HOH HOH . G 6 HOH A 99 799 66 HOH HOH . G 6 HOH A 100 800 108 HOH HOH . G 6 HOH A 101 801 45 HOH HOH . G 6 HOH A 102 802 140 HOH HOH . G 6 HOH A 103 803 52 HOH HOH . G 6 HOH A 104 804 150 HOH HOH . G 6 HOH A 105 805 47 HOH HOH . G 6 HOH A 106 806 88 HOH HOH . G 6 HOH A 107 807 191 HOH HOH . G 6 HOH A 108 808 101 HOH HOH . G 6 HOH A 109 809 54 HOH HOH . G 6 HOH A 110 810 93 HOH HOH . G 6 HOH A 111 811 60 HOH HOH . G 6 HOH A 112 812 38 HOH HOH . G 6 HOH A 113 813 153 HOH HOH . G 6 HOH A 114 814 156 HOH HOH . G 6 HOH A 115 815 181 HOH HOH . G 6 HOH A 116 816 91 HOH HOH . G 6 HOH A 117 817 73 HOH HOH . G 6 HOH A 118 818 109 HOH HOH . G 6 HOH A 119 819 61 HOH HOH . G 6 HOH A 120 820 106 HOH HOH . G 6 HOH A 121 821 36 HOH HOH . G 6 HOH A 122 822 98 HOH HOH . G 6 HOH A 123 823 205 HOH HOH . G 6 HOH A 124 824 121 HOH HOH . G 6 HOH A 125 825 208 HOH HOH . G 6 HOH A 126 826 46 HOH HOH . G 6 HOH A 127 827 177 HOH HOH . G 6 HOH A 128 828 178 HOH HOH . G 6 HOH A 129 829 95 HOH HOH . G 6 HOH A 130 830 117 HOH HOH . G 6 HOH A 131 831 111 HOH HOH . G 6 HOH A 132 832 65 HOH HOH . G 6 HOH A 133 833 48 HOH HOH . G 6 HOH A 134 834 62 HOH HOH . G 6 HOH A 135 835 82 HOH HOH . G 6 HOH A 136 836 147 HOH HOH . G 6 HOH A 137 837 85 HOH HOH . G 6 HOH A 138 838 202 HOH HOH . G 6 HOH A 139 839 76 HOH HOH . G 6 HOH A 140 840 167 HOH HOH . G 6 HOH A 141 841 122 HOH HOH . G 6 HOH A 142 842 149 HOH HOH . G 6 HOH A 143 843 218 HOH HOH . G 6 HOH A 144 844 99 HOH HOH . G 6 HOH A 145 845 90 HOH HOH . G 6 HOH A 146 846 216 HOH HOH . G 6 HOH A 147 847 192 HOH HOH . G 6 HOH A 148 848 94 HOH HOH . G 6 HOH A 149 849 128 HOH HOH . G 6 HOH A 150 850 219 HOH HOH . G 6 HOH A 151 851 42 HOH HOH . G 6 HOH A 152 852 171 HOH HOH . G 6 HOH A 153 853 132 HOH HOH . G 6 HOH A 154 854 125 HOH HOH . G 6 HOH A 155 855 126 HOH HOH . G 6 HOH A 156 856 103 HOH HOH . G 6 HOH A 157 857 107 HOH HOH . G 6 HOH A 158 858 115 HOH HOH . G 6 HOH A 159 859 183 HOH HOH . G 6 HOH A 160 860 213 HOH HOH . G 6 HOH A 161 861 114 HOH HOH . G 6 HOH A 162 862 67 HOH HOH . G 6 HOH A 163 863 160 HOH HOH . G 6 HOH A 164 864 84 HOH HOH . G 6 HOH A 165 865 74 HOH HOH . G 6 HOH A 166 866 196 HOH HOH . G 6 HOH A 167 867 161 HOH HOH . G 6 HOH A 168 868 136 HOH HOH . G 6 HOH A 169 869 198 HOH HOH . G 6 HOH A 170 870 173 HOH HOH . G 6 HOH A 171 871 120 HOH HOH . G 6 HOH A 172 872 220 HOH HOH . G 6 HOH A 173 873 189 HOH HOH . G 6 HOH A 174 874 204 HOH HOH . G 6 HOH A 175 875 159 HOH HOH . G 6 HOH A 176 876 131 HOH HOH . G 6 HOH A 177 877 8 HOH HOH . G 6 HOH A 178 878 221 HOH HOH . G 6 HOH A 179 879 154 HOH HOH . G 6 HOH A 180 880 174 HOH HOH . G 6 HOH A 181 881 130 HOH HOH . G 6 HOH A 182 882 203 HOH HOH . G 6 HOH A 183 883 129 HOH HOH . G 6 HOH A 184 884 127 HOH HOH . G 6 HOH A 185 885 77 HOH HOH . G 6 HOH A 186 886 163 HOH HOH . G 6 HOH A 187 887 185 HOH HOH . G 6 HOH A 188 888 112 HOH HOH . G 6 HOH A 189 889 133 HOH HOH . G 6 HOH A 190 890 155 HOH HOH . G 6 HOH A 191 891 186 HOH HOH . G 6 HOH A 192 892 123 HOH HOH . G 6 HOH A 193 893 164 HOH HOH . G 6 HOH A 194 894 170 HOH HOH . G 6 HOH A 195 895 158 HOH HOH . G 6 HOH A 196 896 165 HOH HOH . G 6 HOH A 197 897 135 HOH HOH . G 6 HOH A 198 898 169 HOH HOH . G 6 HOH A 199 899 145 HOH HOH . G 6 HOH A 200 900 124 HOH HOH . G 6 HOH A 201 902 166 HOH HOH . G 6 HOH A 202 903 172 HOH HOH . H 6 HOH C 1 101 1 HOH HOH . H 6 HOH C 2 102 13 HOH HOH . H 6 HOH C 3 103 100 HOH HOH . H 6 HOH C 4 104 28 HOH HOH . H 6 HOH C 5 105 4 HOH HOH . H 6 HOH C 6 106 188 HOH HOH . H 6 HOH C 7 107 44 HOH HOH . H 6 HOH C 8 108 53 HOH HOH . H 6 HOH C 9 109 200 HOH HOH . H 6 HOH C 10 110 222 HOH HOH . H 6 HOH C 11 111 27 HOH HOH . H 6 HOH C 12 112 215 HOH HOH . H 6 HOH C 13 113 148 HOH HOH . H 6 HOH C 14 114 210 HOH HOH . H 6 HOH C 15 115 141 HOH HOH . H 6 HOH C 16 116 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 5 2.356 -21.52 -7.585 1 51.2 ? S SO4 604 A 1 HETATM 2 O O1 SO4 . . . F 5 2.79 -21.328 -9.008 1 55.43 ? O1 SO4 604 A 1 HETATM 3 O O2 SO4 . . . F 5 0.968 -20.972 -7.338 1 59.25 ? O2 SO4 604 A 1 HETATM 4 O O3 SO4 . . . F 5 2.455 -22.951 -7.236 1 57.44 ? O3 SO4 604 A 1 HETATM 5 O O4 SO4 . . . F 5 3.32 -20.769 -6.723 1 61.01 ? O4 SO4 604 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #