data_8DPF # _model_server_result.job_id '_iaFWD4L7Mn0gd2jpnMnxA' _model_server_result.datetime_utc '2024-11-24 06:49:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dpf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 8DPF # _exptl.entry_id 8DPF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 195.689 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R)-8-chloro-1-methyl-2,3,4,5-tetrahydro-1H-3-benzazepine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DPF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DPF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 127 A CYS 127 1_555 A SG CYS 207 A CYS 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 E SG CYS 159 E CYS 147 1_555 E SG CYS 229 E CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C11 H14 Cl N' _chem_comp.formula_weight 195.689 _chem_comp.id T4U _chem_comp.mon_nstd_flag . _chem_comp.name (1R)-8-chloro-1-methyl-2,3,4,5-tetrahydro-1H-3-benzazepine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Lorcaserin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C04 C05 T4U sing 365 n n C04 C09 T4U sing 366 n n C02 C09 T4U doub 367 n y C02 C03 T4U sing 368 n y C05 N13 T4U sing 369 n n C09 C11 T4U sing 370 n y C03 C10 T4U doub 371 n y N13 C07 T4U sing 372 n n C11 C08 T4U sing 373 n n C11 C06 T4U doub 374 n y C10 C06 T4U sing 375 n y C10 CL12 T4U sing 376 n n C08 C07 T4U sing 377 n n C08 C01 T4U sing 378 n n C01 H012 T4U sing 379 n n C01 H013 T4U sing 380 n n C01 H011 T4U sing 381 n n C02 H021 T4U sing 382 n n C03 H031 T4U sing 383 n n C04 H042 T4U sing 384 n n C04 H041 T4U sing 385 n n C05 H052 T4U sing 386 n n C05 H051 T4U sing 387 n n C06 H061 T4U sing 388 n n C07 H072 T4U sing 389 n n C07 H071 T4U sing 390 n n C08 H081 T4U sing 391 n n N13 H131 T4U sing 392 n n # _atom_sites.entry_id 8DPF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 T4U A 1 501 502 T4U L01 . G 7 CLR A 1 502 503 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 T4U . . . F 6 131.873 146.37 105.119 1 57.54 ? C10 T4U 501 A 1 HETATM 2 C C11 T4U . . . F 6 129.701 145.833 104.143 1 57.54 ? C11 T4U 501 A 1 HETATM 3 C C01 T4U . . . F 6 129.049 147.035 101.874 1 57.54 ? C01 T4U 501 A 1 HETATM 4 C C02 T4U . . . F 6 130.626 144.465 105.912 1 57.54 ? C02 T4U 501 A 1 HETATM 5 C C03 T4U . . . F 6 131.757 145.272 105.973 1 57.54 ? C03 T4U 501 A 1 HETATM 6 C C04 T4U . . . F 6 128.358 143.809 104.976 1 57.54 ? C04 T4U 501 A 1 HETATM 7 C C05 T4U . . . F 6 128.043 143.218 103.602 1 57.54 ? C05 T4U 501 A 1 HETATM 8 C C06 T4U . . . F 6 130.857 146.652 104.212 1 57.54 ? C06 T4U 501 A 1 HETATM 9 C C07 T4U . . . F 6 127.235 145.489 102.994 1 57.54 ? C07 T4U 501 A 1 HETATM 10 C C08 T4U . . . F 6 128.598 146.209 103.102 1 57.54 ? C08 T4U 501 A 1 HETATM 11 C C09 T4U . . . F 6 129.588 144.748 104.989 1 57.54 ? C09 T4U 501 A 1 HETATM 12 N N13 T4U . . . F 6 127.296 144.071 102.696 1 57.54 ? N13 T4U 501 A 1 HETATM 13 CL CL12 T4U . . . F 6 133.319 147.409 105.192 1 57.54 ? CL12 T4U 501 A 1 HETATM 14 H H012 T4U . . . F 6 128.318 146.939 101.081 1 57.54 ? H012 T4U 501 A 1 HETATM 15 H H013 T4U . . . F 6 130.007 146.669 101.526 1 57.54 ? H013 T4U 501 A 1 HETATM 16 H H011 T4U . . . F 6 129.142 148.077 102.155 1 57.54 ? H011 T4U 501 A 1 HETATM 17 H H021 T4U . . . F 6 130.538 143.614 106.575 1 57.54 ? H021 T4U 501 A 1 HETATM 18 H H031 T4U . . . F 6 132.546 145.049 106.681 1 57.54 ? H031 T4U 501 A 1 HETATM 19 H H042 T4U . . . F 6 127.499 144.353 105.344 1 57.54 ? H042 T4U 501 A 1 HETATM 20 H H041 T4U . . . F 6 128.588 142.978 105.632 1 57.54 ? H041 T4U 501 A 1 HETATM 21 H H052 T4U . . . F 6 127.458 142.321 103.761 1 57.54 ? H052 T4U 501 A 1 HETATM 22 H H051 T4U . . . F 6 128.987 142.984 103.125 1 57.54 ? H051 T4U 501 A 1 HETATM 23 H H061 T4U . . . F 6 130.951 147.505 103.552 1 57.54 ? H061 T4U 501 A 1 HETATM 24 H H072 T4U . . . F 6 126.675 145.962 102.197 1 57.54 ? H072 T4U 501 A 1 HETATM 25 H H071 T4U . . . F 6 126.687 145.639 103.915 1 57.54 ? H071 T4U 501 A 1 HETATM 26 H H081 T4U . . . F 6 128.98 145.358 102.555 1 57.54 ? H081 T4U 501 A 1 HETATM 27 H H131 T4U . . . F 6 127.626 143.937 101.76 1 57.54 ? H131 T4U 501 A 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #