data_8DQP # _model_server_result.job_id cNXwDKvRUHbUx5Sr-tsPCw _model_server_result.datetime_utc '2024-10-20 00:28:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dqp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 8DQP # _exptl.entry_id 8DQP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.168 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-hydroxy-6-methoxy-2H-1-benzopyran-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DQP _cell.length_a 58.459 _cell.length_b 58.349 _cell.length_c 273.281 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DQP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ARG 211 A ARG 211 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 A O LEU 214 A LEU 214 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc3 A OE1 GLU 322 A GLU 322 1_555 D CA CA . A CA 502 4_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc4 B O ARG 211 B ARG 211 1_555 I CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc5 B O LEU 214 B LEU 214 1_555 I CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc6 B OE1 GLU 322 B GLU 322 1_555 I CA CA . B CA 501 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc7 I CA CA . B CA 501 1_555 K O HOH . B HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? # _chem_comp.formula 'C10 H8 O4' _chem_comp.formula_weight 192.168 _chem_comp.id T83 _chem_comp.mon_nstd_flag . _chem_comp.name 7-hydroxy-6-methoxy-2H-1-benzopyran-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAH CAA T83 sing 335 n n OAH CAK T83 sing 336 n n CAK CAG T83 doub 337 n y CAK CAJ T83 sing 338 n y OAC CAJ T83 sing 339 n n CAG CAM T83 sing 340 n y CAJ CAF T83 doub 341 n y CAM CAE T83 sing 342 n n CAM CAN T83 doub 343 n y CAF CAN T83 sing 344 n y CAE CAD T83 doub 345 n n CAN OAI T83 sing 346 n n CAD CAL T83 sing 347 n n OAI CAL T83 sing 348 n n CAL OAB T83 doub 349 n n CAA H1 T83 sing 350 n n CAA H2 T83 sing 351 n n CAA H3 T83 sing 352 n n CAD H4 T83 sing 353 n n CAE H5 T83 sing 354 n n CAF H6 T83 sing 355 n n CAG H7 T83 sing 356 n n OAC H8 T83 sing 357 n n # _atom_sites.entry_id 8DQP _atom_sites.fract_transf_matrix[1][1] 0.017106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017138 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T83 A 1 501 501 T83 DRG . D 3 CA A 1 502 1 CA CA . E 4 EDO A 1 503 1 EDO EDO . F 4 EDO A 1 504 2 EDO EDO . G 5 PG4 A 1 505 1 PG4 PG4 . H 6 ACT A 1 506 1 ACT ACT . I 3 CA B 1 501 2 CA CA . J 7 HOH A 1 601 5 HOH HOH . J 7 HOH A 2 602 70 HOH HOH . J 7 HOH A 3 603 57 HOH HOH . J 7 HOH A 4 604 119 HOH HOH . J 7 HOH A 5 605 96 HOH HOH . J 7 HOH A 6 606 58 HOH HOH . J 7 HOH A 7 607 65 HOH HOH . J 7 HOH A 8 608 81 HOH HOH . J 7 HOH A 9 609 80 HOH HOH . J 7 HOH A 10 610 64 HOH HOH . J 7 HOH A 11 611 2 HOH HOH . J 7 HOH A 12 612 1 HOH HOH . J 7 HOH A 13 613 11 HOH HOH . J 7 HOH A 14 614 101 HOH HOH . J 7 HOH A 15 615 59 HOH HOH . J 7 HOH A 16 616 20 HOH HOH . J 7 HOH A 17 617 68 HOH HOH . J 7 HOH A 18 618 78 HOH HOH . J 7 HOH A 19 619 114 HOH HOH . J 7 HOH A 20 620 43 HOH HOH . J 7 HOH A 21 621 12 HOH HOH . J 7 HOH A 22 622 63 HOH HOH . J 7 HOH A 23 623 120 HOH HOH . J 7 HOH A 24 624 10 HOH HOH . J 7 HOH A 25 625 3 HOH HOH . J 7 HOH A 26 626 52 HOH HOH . J 7 HOH A 27 627 46 HOH HOH . J 7 HOH A 28 628 90 HOH HOH . J 7 HOH A 29 629 18 HOH HOH . J 7 HOH A 30 630 8 HOH HOH . J 7 HOH A 31 631 92 HOH HOH . J 7 HOH A 32 632 97 HOH HOH . J 7 HOH A 33 633 61 HOH HOH . J 7 HOH A 34 634 4 HOH HOH . J 7 HOH A 35 635 85 HOH HOH . J 7 HOH A 36 636 40 HOH HOH . J 7 HOH A 37 637 99 HOH HOH . J 7 HOH A 38 638 73 HOH HOH . J 7 HOH A 39 639 37 HOH HOH . J 7 HOH A 40 640 100 HOH HOH . J 7 HOH A 41 641 36 HOH HOH . J 7 HOH A 42 642 21 HOH HOH . J 7 HOH A 43 643 32 HOH HOH . J 7 HOH A 44 644 22 HOH HOH . J 7 HOH A 45 645 112 HOH HOH . J 7 HOH A 46 646 44 HOH HOH . J 7 HOH A 47 647 38 HOH HOH . J 7 HOH A 48 648 104 HOH HOH . J 7 HOH A 49 649 29 HOH HOH . J 7 HOH A 50 650 116 HOH HOH . J 7 HOH A 51 651 19 HOH HOH . J 7 HOH A 52 652 109 HOH HOH . J 7 HOH A 53 653 30 HOH HOH . J 7 HOH A 54 654 115 HOH HOH . J 7 HOH A 55 655 72 HOH HOH . J 7 HOH A 56 656 93 HOH HOH . J 7 HOH A 57 657 95 HOH HOH . J 7 HOH A 58 658 35 HOH HOH . J 7 HOH A 59 659 27 HOH HOH . J 7 HOH A 60 660 25 HOH HOH . J 7 HOH A 61 661 47 HOH HOH . J 7 HOH A 62 662 111 HOH HOH . J 7 HOH A 63 663 91 HOH HOH . J 7 HOH A 64 664 34 HOH HOH . J 7 HOH A 65 665 53 HOH HOH . J 7 HOH A 66 666 28 HOH HOH . J 7 HOH A 67 667 75 HOH HOH . J 7 HOH A 68 668 122 HOH HOH . K 7 HOH B 1 601 117 HOH HOH . K 7 HOH B 2 602 49 HOH HOH . K 7 HOH B 3 603 107 HOH HOH . K 7 HOH B 4 604 87 HOH HOH . K 7 HOH B 5 605 102 HOH HOH . K 7 HOH B 6 606 24 HOH HOH . K 7 HOH B 7 607 86 HOH HOH . K 7 HOH B 8 608 13 HOH HOH . K 7 HOH B 9 609 110 HOH HOH . K 7 HOH B 10 610 71 HOH HOH . K 7 HOH B 11 611 98 HOH HOH . K 7 HOH B 12 612 56 HOH HOH . K 7 HOH B 13 613 39 HOH HOH . K 7 HOH B 14 614 45 HOH HOH . K 7 HOH B 15 615 79 HOH HOH . K 7 HOH B 16 616 42 HOH HOH . K 7 HOH B 17 617 121 HOH HOH . K 7 HOH B 18 618 69 HOH HOH . K 7 HOH B 19 619 7 HOH HOH . K 7 HOH B 20 620 26 HOH HOH . K 7 HOH B 21 621 103 HOH HOH . K 7 HOH B 22 622 74 HOH HOH . K 7 HOH B 23 623 9 HOH HOH . K 7 HOH B 24 624 48 HOH HOH . K 7 HOH B 25 625 62 HOH HOH . K 7 HOH B 26 626 15 HOH HOH . K 7 HOH B 27 627 14 HOH HOH . K 7 HOH B 28 628 54 HOH HOH . K 7 HOH B 29 629 67 HOH HOH . K 7 HOH B 30 630 88 HOH HOH . K 7 HOH B 31 631 16 HOH HOH . K 7 HOH B 32 632 76 HOH HOH . K 7 HOH B 33 633 23 HOH HOH . K 7 HOH B 34 634 50 HOH HOH . K 7 HOH B 35 635 51 HOH HOH . K 7 HOH B 36 636 105 HOH HOH . K 7 HOH B 37 637 84 HOH HOH . K 7 HOH B 38 638 94 HOH HOH . K 7 HOH B 39 639 108 HOH HOH . K 7 HOH B 40 640 82 HOH HOH . K 7 HOH B 41 641 106 HOH HOH . K 7 HOH B 42 642 17 HOH HOH . K 7 HOH B 43 643 66 HOH HOH . K 7 HOH B 44 644 89 HOH HOH . K 7 HOH B 45 645 31 HOH HOH . K 7 HOH B 46 646 33 HOH HOH . K 7 HOH B 47 647 55 HOH HOH . K 7 HOH B 48 648 41 HOH HOH . K 7 HOH B 49 649 113 HOH HOH . K 7 HOH B 50 650 118 HOH HOH . K 7 HOH B 51 651 83 HOH HOH . K 7 HOH B 52 652 123 HOH HOH . K 7 HOH B 53 653 77 HOH HOH . K 7 HOH B 54 654 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA T83 . . . C 2 -8.141 17.982 -18.07 0.91 105.01 ? CAA T83 501 A 1 HETATM 2 C CAD T83 . . . C 2 -3.964 21.665 -15.065 0.91 69.46 ? CAD T83 501 A 1 HETATM 3 C CAE T83 . . . C 2 -4.387 20.617 -15.949 0.91 79.16 ? CAE T83 501 A 1 HETATM 4 C CAF T83 . . . C 2 -8.076 21.726 -16.348 0.91 63.8 ? CAF T83 501 A 1 HETATM 5 C CAG T83 . . . C 2 -6.188 19.828 -17.466 0.91 71.31 ? CAG T83 501 A 1 HETATM 6 C CAJ T83 . . . C 2 -8.517 20.865 -17.312 0.91 66.93 ? CAJ T83 501 A 1 HETATM 7 C CAK T83 . . . C 2 -7.553 19.991 -17.86 0.91 73.55 ? CAK T83 501 A 1 HETATM 8 C CAL T83 . . . C 2 -4.925 22.654 -14.744 0.91 64 ? CAL T83 501 A 1 HETATM 9 C CAM T83 . . . C 2 -5.75 20.659 -16.416 0.91 66.25 ? CAM T83 501 A 1 HETATM 10 C CAN T83 . . . C 2 -6.695 21.621 -15.934 0.91 68.31 ? CAN T83 501 A 1 HETATM 11 O OAB T83 . . . C 2 -4.557 23.673 -14.234 0.91 62.94 ? OAB T83 501 A 1 HETATM 12 O OAC T83 . . . C 2 -9.861 20.867 -17.761 0.91 68.92 ? OAC T83 501 A 1 HETATM 13 O OAH T83 . . . C 2 -8.08 19.197 -18.811 0.91 83.78 ? OAH T83 501 A 1 HETATM 14 O OAI T83 . . . C 2 -6.253 22.56 -14.995 0.91 67.8 ? OAI T83 501 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #