data_8DQP # _model_server_result.job_id icUS2vQkxgwLV1U9qNatFg _model_server_result.datetime_utc '2024-11-23 07:46:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dqp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 8DQP # _exptl.entry_id 8DQP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DQP _cell.length_a 58.459 _cell.length_b 58.349 _cell.length_c 273.281 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DQP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ARG 211 A ARG 211 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 A O LEU 214 A LEU 214 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc3 A OE1 GLU 322 A GLU 322 1_555 D CA CA . A CA 502 4_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc4 B O ARG 211 B ARG 211 1_555 I CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc5 B O LEU 214 B LEU 214 1_555 I CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc6 B OE1 GLU 322 B GLU 322 1_555 I CA CA . B CA 501 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc7 I CA CA . B CA 501 1_555 K O HOH . B HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8DQP _atom_sites.fract_transf_matrix[1][1] 0.017106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017138 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T83 A 1 501 501 T83 DRG . D 3 CA A 1 502 1 CA CA . E 4 EDO A 1 503 1 EDO EDO . F 4 EDO A 1 504 2 EDO EDO . G 5 PG4 A 1 505 1 PG4 PG4 . H 6 ACT A 1 506 1 ACT ACT . I 3 CA B 1 501 2 CA CA . J 7 HOH A 1 601 5 HOH HOH . J 7 HOH A 2 602 70 HOH HOH . J 7 HOH A 3 603 57 HOH HOH . J 7 HOH A 4 604 119 HOH HOH . J 7 HOH A 5 605 96 HOH HOH . J 7 HOH A 6 606 58 HOH HOH . J 7 HOH A 7 607 65 HOH HOH . J 7 HOH A 8 608 81 HOH HOH . J 7 HOH A 9 609 80 HOH HOH . J 7 HOH A 10 610 64 HOH HOH . J 7 HOH A 11 611 2 HOH HOH . J 7 HOH A 12 612 1 HOH HOH . J 7 HOH A 13 613 11 HOH HOH . J 7 HOH A 14 614 101 HOH HOH . J 7 HOH A 15 615 59 HOH HOH . J 7 HOH A 16 616 20 HOH HOH . J 7 HOH A 17 617 68 HOH HOH . J 7 HOH A 18 618 78 HOH HOH . J 7 HOH A 19 619 114 HOH HOH . J 7 HOH A 20 620 43 HOH HOH . J 7 HOH A 21 621 12 HOH HOH . J 7 HOH A 22 622 63 HOH HOH . J 7 HOH A 23 623 120 HOH HOH . J 7 HOH A 24 624 10 HOH HOH . J 7 HOH A 25 625 3 HOH HOH . J 7 HOH A 26 626 52 HOH HOH . J 7 HOH A 27 627 46 HOH HOH . J 7 HOH A 28 628 90 HOH HOH . J 7 HOH A 29 629 18 HOH HOH . J 7 HOH A 30 630 8 HOH HOH . J 7 HOH A 31 631 92 HOH HOH . J 7 HOH A 32 632 97 HOH HOH . J 7 HOH A 33 633 61 HOH HOH . J 7 HOH A 34 634 4 HOH HOH . J 7 HOH A 35 635 85 HOH HOH . J 7 HOH A 36 636 40 HOH HOH . J 7 HOH A 37 637 99 HOH HOH . J 7 HOH A 38 638 73 HOH HOH . J 7 HOH A 39 639 37 HOH HOH . J 7 HOH A 40 640 100 HOH HOH . J 7 HOH A 41 641 36 HOH HOH . J 7 HOH A 42 642 21 HOH HOH . J 7 HOH A 43 643 32 HOH HOH . J 7 HOH A 44 644 22 HOH HOH . J 7 HOH A 45 645 112 HOH HOH . J 7 HOH A 46 646 44 HOH HOH . J 7 HOH A 47 647 38 HOH HOH . J 7 HOH A 48 648 104 HOH HOH . J 7 HOH A 49 649 29 HOH HOH . J 7 HOH A 50 650 116 HOH HOH . J 7 HOH A 51 651 19 HOH HOH . J 7 HOH A 52 652 109 HOH HOH . J 7 HOH A 53 653 30 HOH HOH . J 7 HOH A 54 654 115 HOH HOH . J 7 HOH A 55 655 72 HOH HOH . J 7 HOH A 56 656 93 HOH HOH . J 7 HOH A 57 657 95 HOH HOH . J 7 HOH A 58 658 35 HOH HOH . J 7 HOH A 59 659 27 HOH HOH . J 7 HOH A 60 660 25 HOH HOH . J 7 HOH A 61 661 47 HOH HOH . J 7 HOH A 62 662 111 HOH HOH . J 7 HOH A 63 663 91 HOH HOH . J 7 HOH A 64 664 34 HOH HOH . J 7 HOH A 65 665 53 HOH HOH . J 7 HOH A 66 666 28 HOH HOH . J 7 HOH A 67 667 75 HOH HOH . J 7 HOH A 68 668 122 HOH HOH . K 7 HOH B 1 601 117 HOH HOH . K 7 HOH B 2 602 49 HOH HOH . K 7 HOH B 3 603 107 HOH HOH . K 7 HOH B 4 604 87 HOH HOH . K 7 HOH B 5 605 102 HOH HOH . K 7 HOH B 6 606 24 HOH HOH . K 7 HOH B 7 607 86 HOH HOH . K 7 HOH B 8 608 13 HOH HOH . K 7 HOH B 9 609 110 HOH HOH . K 7 HOH B 10 610 71 HOH HOH . K 7 HOH B 11 611 98 HOH HOH . K 7 HOH B 12 612 56 HOH HOH . K 7 HOH B 13 613 39 HOH HOH . K 7 HOH B 14 614 45 HOH HOH . K 7 HOH B 15 615 79 HOH HOH . K 7 HOH B 16 616 42 HOH HOH . K 7 HOH B 17 617 121 HOH HOH . K 7 HOH B 18 618 69 HOH HOH . K 7 HOH B 19 619 7 HOH HOH . K 7 HOH B 20 620 26 HOH HOH . K 7 HOH B 21 621 103 HOH HOH . K 7 HOH B 22 622 74 HOH HOH . K 7 HOH B 23 623 9 HOH HOH . K 7 HOH B 24 624 48 HOH HOH . K 7 HOH B 25 625 62 HOH HOH . K 7 HOH B 26 626 15 HOH HOH . K 7 HOH B 27 627 14 HOH HOH . K 7 HOH B 28 628 54 HOH HOH . K 7 HOH B 29 629 67 HOH HOH . K 7 HOH B 30 630 88 HOH HOH . K 7 HOH B 31 631 16 HOH HOH . K 7 HOH B 32 632 76 HOH HOH . K 7 HOH B 33 633 23 HOH HOH . K 7 HOH B 34 634 50 HOH HOH . K 7 HOH B 35 635 51 HOH HOH . K 7 HOH B 36 636 105 HOH HOH . K 7 HOH B 37 637 84 HOH HOH . K 7 HOH B 38 638 94 HOH HOH . K 7 HOH B 39 639 108 HOH HOH . K 7 HOH B 40 640 82 HOH HOH . K 7 HOH B 41 641 106 HOH HOH . K 7 HOH B 42 642 17 HOH HOH . K 7 HOH B 43 643 66 HOH HOH . K 7 HOH B 44 644 89 HOH HOH . K 7 HOH B 45 645 31 HOH HOH . K 7 HOH B 46 646 33 HOH HOH . K 7 HOH B 47 647 55 HOH HOH . K 7 HOH B 48 648 41 HOH HOH . K 7 HOH B 49 649 113 HOH HOH . K 7 HOH B 50 650 118 HOH HOH . K 7 HOH B 51 651 83 HOH HOH . K 7 HOH B 52 652 123 HOH HOH . K 7 HOH B 53 653 77 HOH HOH . K 7 HOH B 54 654 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -15.313 _atom_site.Cartn_y 39.948 _atom_site.Cartn_z 0.811 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #