data_8DQP # _model_server_result.job_id o1Mcdtyw2i4Yv_qgjNWGvA _model_server_result.datetime_utc '2024-11-23 07:49:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dqp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":505}' # _entry.id 8DQP # _exptl.entry_id 8DQP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DQP _cell.length_a 58.459 _cell.length_b 58.349 _cell.length_c 273.281 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DQP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ARG 211 A ARG 211 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc2 A O LEU 214 A LEU 214 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc3 A OE1 GLU 322 A GLU 322 1_555 D CA CA . A CA 502 4_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc4 B O ARG 211 B ARG 211 1_555 I CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc5 B O LEU 214 B LEU 214 1_555 I CA CA . B CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc6 B OE1 GLU 322 B GLU 322 1_555 I CA CA . B CA 501 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc7 I CA CA . B CA 501 1_555 K O HOH . B HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 252 n n O1 HO1 PG4 sing 253 n n C1 C2 PG4 sing 254 n n C1 H11 PG4 sing 255 n n C1 H12 PG4 sing 256 n n C2 O2 PG4 sing 257 n n C2 H21 PG4 sing 258 n n C2 H22 PG4 sing 259 n n O2 C3 PG4 sing 260 n n C3 C4 PG4 sing 261 n n C3 H31 PG4 sing 262 n n C3 H32 PG4 sing 263 n n C4 O3 PG4 sing 264 n n C4 H41 PG4 sing 265 n n C4 H42 PG4 sing 266 n n O3 C5 PG4 sing 267 n n C5 C6 PG4 sing 268 n n C5 H51 PG4 sing 269 n n C5 H52 PG4 sing 270 n n C6 O4 PG4 sing 271 n n C6 H61 PG4 sing 272 n n C6 H62 PG4 sing 273 n n O4 C7 PG4 sing 274 n n C7 C8 PG4 sing 275 n n C7 H71 PG4 sing 276 n n C7 H72 PG4 sing 277 n n C8 O5 PG4 sing 278 n n C8 H81 PG4 sing 279 n n C8 H82 PG4 sing 280 n n O5 HO5 PG4 sing 281 n n # _atom_sites.entry_id 8DQP _atom_sites.fract_transf_matrix[1][1] 0.017106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017138 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T83 A 1 501 501 T83 DRG . D 3 CA A 1 502 1 CA CA . E 4 EDO A 1 503 1 EDO EDO . F 4 EDO A 1 504 2 EDO EDO . G 5 PG4 A 1 505 1 PG4 PG4 . H 6 ACT A 1 506 1 ACT ACT . I 3 CA B 1 501 2 CA CA . J 7 HOH A 1 601 5 HOH HOH . J 7 HOH A 2 602 70 HOH HOH . J 7 HOH A 3 603 57 HOH HOH . J 7 HOH A 4 604 119 HOH HOH . J 7 HOH A 5 605 96 HOH HOH . J 7 HOH A 6 606 58 HOH HOH . J 7 HOH A 7 607 65 HOH HOH . J 7 HOH A 8 608 81 HOH HOH . J 7 HOH A 9 609 80 HOH HOH . J 7 HOH A 10 610 64 HOH HOH . J 7 HOH A 11 611 2 HOH HOH . J 7 HOH A 12 612 1 HOH HOH . J 7 HOH A 13 613 11 HOH HOH . J 7 HOH A 14 614 101 HOH HOH . J 7 HOH A 15 615 59 HOH HOH . J 7 HOH A 16 616 20 HOH HOH . J 7 HOH A 17 617 68 HOH HOH . J 7 HOH A 18 618 78 HOH HOH . J 7 HOH A 19 619 114 HOH HOH . J 7 HOH A 20 620 43 HOH HOH . J 7 HOH A 21 621 12 HOH HOH . J 7 HOH A 22 622 63 HOH HOH . J 7 HOH A 23 623 120 HOH HOH . J 7 HOH A 24 624 10 HOH HOH . J 7 HOH A 25 625 3 HOH HOH . J 7 HOH A 26 626 52 HOH HOH . J 7 HOH A 27 627 46 HOH HOH . J 7 HOH A 28 628 90 HOH HOH . J 7 HOH A 29 629 18 HOH HOH . J 7 HOH A 30 630 8 HOH HOH . J 7 HOH A 31 631 92 HOH HOH . J 7 HOH A 32 632 97 HOH HOH . J 7 HOH A 33 633 61 HOH HOH . J 7 HOH A 34 634 4 HOH HOH . J 7 HOH A 35 635 85 HOH HOH . J 7 HOH A 36 636 40 HOH HOH . J 7 HOH A 37 637 99 HOH HOH . J 7 HOH A 38 638 73 HOH HOH . J 7 HOH A 39 639 37 HOH HOH . J 7 HOH A 40 640 100 HOH HOH . J 7 HOH A 41 641 36 HOH HOH . J 7 HOH A 42 642 21 HOH HOH . J 7 HOH A 43 643 32 HOH HOH . J 7 HOH A 44 644 22 HOH HOH . J 7 HOH A 45 645 112 HOH HOH . J 7 HOH A 46 646 44 HOH HOH . J 7 HOH A 47 647 38 HOH HOH . J 7 HOH A 48 648 104 HOH HOH . J 7 HOH A 49 649 29 HOH HOH . J 7 HOH A 50 650 116 HOH HOH . J 7 HOH A 51 651 19 HOH HOH . J 7 HOH A 52 652 109 HOH HOH . J 7 HOH A 53 653 30 HOH HOH . J 7 HOH A 54 654 115 HOH HOH . J 7 HOH A 55 655 72 HOH HOH . J 7 HOH A 56 656 93 HOH HOH . J 7 HOH A 57 657 95 HOH HOH . J 7 HOH A 58 658 35 HOH HOH . J 7 HOH A 59 659 27 HOH HOH . J 7 HOH A 60 660 25 HOH HOH . J 7 HOH A 61 661 47 HOH HOH . J 7 HOH A 62 662 111 HOH HOH . J 7 HOH A 63 663 91 HOH HOH . J 7 HOH A 64 664 34 HOH HOH . J 7 HOH A 65 665 53 HOH HOH . J 7 HOH A 66 666 28 HOH HOH . J 7 HOH A 67 667 75 HOH HOH . J 7 HOH A 68 668 122 HOH HOH . K 7 HOH B 1 601 117 HOH HOH . K 7 HOH B 2 602 49 HOH HOH . K 7 HOH B 3 603 107 HOH HOH . K 7 HOH B 4 604 87 HOH HOH . K 7 HOH B 5 605 102 HOH HOH . K 7 HOH B 6 606 24 HOH HOH . K 7 HOH B 7 607 86 HOH HOH . K 7 HOH B 8 608 13 HOH HOH . K 7 HOH B 9 609 110 HOH HOH . K 7 HOH B 10 610 71 HOH HOH . K 7 HOH B 11 611 98 HOH HOH . K 7 HOH B 12 612 56 HOH HOH . K 7 HOH B 13 613 39 HOH HOH . K 7 HOH B 14 614 45 HOH HOH . K 7 HOH B 15 615 79 HOH HOH . K 7 HOH B 16 616 42 HOH HOH . K 7 HOH B 17 617 121 HOH HOH . K 7 HOH B 18 618 69 HOH HOH . K 7 HOH B 19 619 7 HOH HOH . K 7 HOH B 20 620 26 HOH HOH . K 7 HOH B 21 621 103 HOH HOH . K 7 HOH B 22 622 74 HOH HOH . K 7 HOH B 23 623 9 HOH HOH . K 7 HOH B 24 624 48 HOH HOH . K 7 HOH B 25 625 62 HOH HOH . K 7 HOH B 26 626 15 HOH HOH . K 7 HOH B 27 627 14 HOH HOH . K 7 HOH B 28 628 54 HOH HOH . K 7 HOH B 29 629 67 HOH HOH . K 7 HOH B 30 630 88 HOH HOH . K 7 HOH B 31 631 16 HOH HOH . K 7 HOH B 32 632 76 HOH HOH . K 7 HOH B 33 633 23 HOH HOH . K 7 HOH B 34 634 50 HOH HOH . K 7 HOH B 35 635 51 HOH HOH . K 7 HOH B 36 636 105 HOH HOH . K 7 HOH B 37 637 84 HOH HOH . K 7 HOH B 38 638 94 HOH HOH . K 7 HOH B 39 639 108 HOH HOH . K 7 HOH B 40 640 82 HOH HOH . K 7 HOH B 41 641 106 HOH HOH . K 7 HOH B 42 642 17 HOH HOH . K 7 HOH B 43 643 66 HOH HOH . K 7 HOH B 44 644 89 HOH HOH . K 7 HOH B 45 645 31 HOH HOH . K 7 HOH B 46 646 33 HOH HOH . K 7 HOH B 47 647 55 HOH HOH . K 7 HOH B 48 648 41 HOH HOH . K 7 HOH B 49 649 113 HOH HOH . K 7 HOH B 50 650 118 HOH HOH . K 7 HOH B 51 651 83 HOH HOH . K 7 HOH B 52 652 123 HOH HOH . K 7 HOH B 53 653 77 HOH HOH . K 7 HOH B 54 654 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . G 5 -8.665 27.404 -12.564 1 76.07 ? O1 PG4 505 A 1 HETATM 2 C C1 PG4 . . . G 5 -8.308 26.167 -11.809 1 79.36 ? C1 PG4 505 A 1 HETATM 3 C C2 PG4 . . . G 5 -6.987 25.474 -12.254 1 67.12 ? C2 PG4 505 A 1 HETATM 4 O O2 PG4 . . . G 5 -5.926 25.273 -11.238 1 74.78 ? O2 PG4 505 A 1 HETATM 5 C C3 PG4 . . . G 5 -4.454 25.467 -11.506 1 71.59 ? C3 PG4 505 A 1 HETATM 6 C C4 PG4 . . . G 5 -3.55 24.991 -10.286 1 77.36 ? C4 PG4 505 A 1 HETATM 7 O O3 PG4 . . . G 5 -2.913 25.936 -9.275 1 70.44 ? O3 PG4 505 A 1 HETATM 8 C C5 PG4 . . . G 5 -1.803 25.317 -8.508 1 74.56 ? C5 PG4 505 A 1 HETATM 9 C C6 PG4 . . . G 5 -1.394 23.8 -8.185 1 79.19 ? C6 PG4 505 A 1 HETATM 10 O O4 PG4 . . . G 5 -0.22 23.811 -7.229 1 76.17 ? O4 PG4 505 A 1 HETATM 11 C C7 PG4 . . . G 5 -0.061 22.955 -5.983 1 84.31 ? C7 PG4 505 A 1 HETATM 12 C C8 PG4 . . . G 5 0.448 23.608 -4.604 1 87.26 ? C8 PG4 505 A 1 HETATM 13 O O5 PG4 . . . G 5 1.826 23.312 -4.107 1 87.85 ? O5 PG4 505 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #