data_8DR8
#
_model_server_result.job_id            70p1u9XSwEkHxnKzmnmasw 
_model_server_result.datetime_utc      '2024-10-15 11:21:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8dr8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":901}' 
#
_entry.id    8DR8 
#
_exptl.entry_id    8DR8 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    20 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8DR8 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DR8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 54 1_555 A SG CYS 402 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf2 A SG CYS 57 A CYS 57 1_555 A SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 A SG CYS 205 A CYS 113 1_555 A SG CYS 387 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 B SG CYS 54 B CYS 54 1_555 B SG CYS 402 B CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 B SG CYS 57 B CYS 57 1_555 B SG CYS 65 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 B SG CYS 205 B CYS 113 1_555 B SG CYS 387 B CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 C SG CYS 54 C CYS 54 1_555 C SG CYS 402 C CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf8 C SG CYS 57 C CYS 57 1_555 C SG CYS 65 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf9 C SG CYS 205 C CYS 113 1_555 C SG CYS 387 C CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 D SG CYS 54 D CYS 54 1_555 D SG CYS 402 D CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 D SG CYS 57 D CYS 57 1_555 D SG CYS 65 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf12 D SG CYS 205 D CYS 113 1_555 D SG CYS 387 D CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 E SG CYS 54 E CYS 54 1_555 E SG CYS 402 E CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf14 E SG CYS 57 E CYS 57 1_555 E SG CYS 65 E CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf15 E SG CYS 205 E CYS 113 1_555 E SG CYS 387 E CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf16 F SG CYS 54 F CYS 54 1_555 F SG CYS 308 F CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf17 F SG CYS 115 F CYS 115 1_555 F SG CYS 293 F CYS 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     8DR8 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 PEE A 1 901 901 PEE PEE . 
H 3 PEE A 1 902 902 PEE PEE . 
I 3 PEE A 1 903 903 PEE PEE . 
J 3 PEE B 1 901 901 PEE PEE . 
K 3 PEE B 1 902 902 PEE PEE . 
L 3 PEE B 1 903 903 PEE PEE . 
M 3 PEE B 1 904 901 PEE PEE . 
N 3 PEE C 1 901 901 PEE PEE . 
O 3 PEE C 1 902 902 PEE PEE . 
P 3 PEE D 1 901 901 PEE PEE . 
Q 3 PEE D 1 902 902 PEE PEE . 
R 3 PEE D 1 903 903 PEE PEE . 
S 3 PEE D 1 904 903 PEE PEE . 
T 3 PEE E 1 901 901 PEE PEE . 
U 3 PEE E 1 902 902 PEE PEE . 
V 3 PEE E 1 903 903 PEE PEE . 
W 3 PEE F 1 901 901 PEE PEE . 
X 3 PEE F 1 902 902 PEE PEE . 
Y 3 PEE F 1 903 903 PEE PEE . 
Z 3 PEE F 1 904 902 PEE PEE . 
AA 4 HOH A 1 1001 1 HOH HOH . 
BA 4 HOH B 1 1001 4 HOH HOH . 
CA 4 HOH C 1 1001 5 HOH HOH . 
DA 4 HOH D 1 1001 6 HOH HOH . 
EA 4 HOH E 1 1001 3 HOH HOH . 
FA 4 HOH F 1 1001 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C27 PEE . . . J 3 230.383 213.792 190.882 1 58.13 ? C27 PEE 901 B 1 
HETATM 2 C C26 PEE . . . J 3 231.596 214.664 190.601 1 60.79 ? C26 PEE 901 B 1 
HETATM 3 C C25 PEE . . . J 3 232.452 214.075 189.478 1 66.31 ? C25 PEE 901 B 1 
HETATM 4 C C24 PEE . . . J 3 233.651 213.308 190.031 1 63.22 ? C24 PEE 901 B 1 
HETATM 5 C C23 PEE . . . J 3 234.735 213.045 188.977 1 63.12 ? C23 PEE 901 B 1 
HETATM 6 C C22 PEE . . . J 3 236.05 213.686 189.408 1 63.99 ? C22 PEE 901 B 1 
HETATM 7 C C21 PEE . . . J 3 237.256 213.353 188.532 1 64.13 ? C21 PEE 901 B 1 
HETATM 8 C C20 PEE . . . J 3 238.342 214.425 188.503 1 60.64 ? C20 PEE 901 B 1 
HETATM 9 C C19 PEE . . . J 3 239.34 214.208 187.363 1 63.04 ? C19 PEE 901 B 1 
HETATM 10 C C18 PEE . . . J 3 240.774 214.466 187.81 1 61.35 ? C18 PEE 901 B 1 
HETATM 11 C C17 PEE . . . J 3 241.757 214.537 186.641 1 62.13 ? C17 PEE 901 B 1 
HETATM 12 C C16 PEE . . . J 3 241.529 215.829 185.853 1 60.41 ? C16 PEE 901 B 1 
HETATM 13 C C15 PEE . . . J 3 241.691 215.642 184.347 1 55.51 ? C15 PEE 901 B 1 
HETATM 14 C C14 PEE . . . J 3 243.014 214.945 184.001 1 57.46 ? C14 PEE 901 B 1 
HETATM 15 C C13 PEE . . . J 3 243.931 215.801 183.132 1 56.82 ? C13 PEE 901 B 1 
HETATM 16 C C12 PEE . . . J 3 244.882 214.934 182.301 1 58.17 ? C12 PEE 901 B 1 
HETATM 17 C C11 PEE . . . J 3 244.428 214.841 180.843 1 62.63 ? C11 PEE 901 B 1 
HETATM 18 C C10 PEE . . . J 3 245.206 213.775 180.128 1 64.48 ? C10 PEE 901 B 1 
HETATM 19 O O4 PEE . . . J 3 245.465 212.681 180.589 1 66.16 ? O4 PEE 901 B 1 
HETATM 20 O O2 PEE . . . J 3 245.62 214.116 178.883 1 62.31 ? O2 PEE 901 B 1 
HETATM 21 C C2 PEE . . . J 3 246.727 213.42 178.344 1 63.23 ? C2 PEE 901 B 1 
HETATM 22 C C1 PEE . . . J 3 246.161 212.534 177.196 1 64.35 ? C1 PEE 901 B 1 
HETATM 23 O O3P PEE . . . J 3 245.278 213.32 176.475 1 67.43 ? O3P PEE 901 B 1 
HETATM 24 P P PEE . . . J 3 244.4 212.791 175.168 1 75.7 ? P PEE 901 B 1 
HETATM 25 O O2P PEE . . . J 3 243.056 213.442 175.188 1 63.51 ? O2P PEE 901 B 1 
HETATM 26 O O1P PEE . . . J 3 244.863 211.429 174.814 1 66.19 ? O1P PEE 901 B 1 
HETATM 27 O O4P PEE . . . J 3 245.342 213.829 174.082 1 64.76 ? O4P PEE 901 B 1 
HETATM 28 C C4 PEE . . . J 3 245.105 215.168 174.088 1 65.74 ? C4 PEE 901 B 1 
HETATM 29 C C5 PEE . . . J 3 245.427 215.693 172.658 1 67.12 ? C5 PEE 901 B 1 
HETATM 30 N N PEE . . . J 3 246.602 216.657 172.767 1 61.74 ? N PEE 901 B 1 
HETATM 31 C C3 PEE . . . J 3 247.723 214.46 177.792 1 65.88 ? C3 PEE 901 B 1 
HETATM 32 O O3 PEE . . . J 3 248.02 215.409 178.798 1 70.71 ? O3 PEE 901 B 1 
HETATM 33 C C30 PEE . . . J 3 249.257 215.964 178.869 1 66.14 ? C30 PEE 901 B 1 
HETATM 34 O O5 PEE . . . J 3 250.097 215.701 178.025 1 64.66 ? O5 PEE 901 B 1 
HETATM 35 C C31 PEE . . . J 3 249.432 216.891 180.047 1 60.19 ? C31 PEE 901 B 1 
HETATM 36 C C32 PEE . . . J 3 248.509 216.451 181.192 1 57.8 ? C32 PEE 901 B 1 
HETATM 37 C C33 PEE . . . J 3 248.476 217.424 182.374 1 61.48 ? C33 PEE 901 B 1 
HETATM 38 C C34 PEE . . . J 3 247.751 216.846 183.599 1 61.83 ? C34 PEE 901 B 1 
HETATM 39 C C35 PEE . . . J 3 247.951 217.655 184.882 1 62.96 ? C35 PEE 901 B 1 
HETATM 40 C C36 PEE . . . J 3 247.601 219.139 184.704 1 63.7 ? C36 PEE 901 B 1 
HETATM 41 C C37 PEE . . . J 3 248.613 220.084 185.371 1 61.36 ? C37 PEE 901 B 1 
HETATM 42 C C38 PEE . . . J 3 249.789 220.419 184.446 1 59.34 ? C38 PEE 901 B 1 
HETATM 43 C C39 PEE . . . J 3 251.012 220.981 185.182 1 58.51 ? C39 PEE 901 B 1 
HETATM 44 C C40 PEE . . . J 3 251.926 221.826 184.281 1 61.09 ? C40 PEE 901 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           44 
#