data_8DR8
#
_model_server_result.job_id            i6WwvtbBm9fnwHRSWIkVTA 
_model_server_result.datetime_utc      '2024-10-15 11:21:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8dr8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":901}' 
#
_entry.id    8DR8 
#
_exptl.entry_id    8DR8 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    20 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8DR8 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DR8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 54 1_555 A SG CYS 402 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf2 A SG CYS 57 A CYS 57 1_555 A SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 A SG CYS 205 A CYS 113 1_555 A SG CYS 387 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 B SG CYS 54 B CYS 54 1_555 B SG CYS 402 B CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 B SG CYS 57 B CYS 57 1_555 B SG CYS 65 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 B SG CYS 205 B CYS 113 1_555 B SG CYS 387 B CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 C SG CYS 54 C CYS 54 1_555 C SG CYS 402 C CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf8 C SG CYS 57 C CYS 57 1_555 C SG CYS 65 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf9 C SG CYS 205 C CYS 113 1_555 C SG CYS 387 C CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 D SG CYS 54 D CYS 54 1_555 D SG CYS 402 D CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 D SG CYS 57 D CYS 57 1_555 D SG CYS 65 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf12 D SG CYS 205 D CYS 113 1_555 D SG CYS 387 D CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 E SG CYS 54 E CYS 54 1_555 E SG CYS 402 E CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf14 E SG CYS 57 E CYS 57 1_555 E SG CYS 65 E CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf15 E SG CYS 205 E CYS 113 1_555 E SG CYS 387 E CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf16 F SG CYS 54 F CYS 54 1_555 F SG CYS 308 F CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf17 F SG CYS 115 F CYS 115 1_555 F SG CYS 293 F CYS 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     8DR8 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 PEE A 1 901 901 PEE PEE . 
H 3 PEE A 1 902 902 PEE PEE . 
I 3 PEE A 1 903 903 PEE PEE . 
J 3 PEE B 1 901 901 PEE PEE . 
K 3 PEE B 1 902 902 PEE PEE . 
L 3 PEE B 1 903 903 PEE PEE . 
M 3 PEE B 1 904 901 PEE PEE . 
N 3 PEE C 1 901 901 PEE PEE . 
O 3 PEE C 1 902 902 PEE PEE . 
P 3 PEE D 1 901 901 PEE PEE . 
Q 3 PEE D 1 902 902 PEE PEE . 
R 3 PEE D 1 903 903 PEE PEE . 
S 3 PEE D 1 904 903 PEE PEE . 
T 3 PEE E 1 901 901 PEE PEE . 
U 3 PEE E 1 902 902 PEE PEE . 
V 3 PEE E 1 903 903 PEE PEE . 
W 3 PEE F 1 901 901 PEE PEE . 
X 3 PEE F 1 902 902 PEE PEE . 
Y 3 PEE F 1 903 903 PEE PEE . 
Z 3 PEE F 1 904 902 PEE PEE . 
AA 4 HOH A 1 1001 1 HOH HOH . 
BA 4 HOH B 1 1001 4 HOH HOH . 
CA 4 HOH C 1 1001 5 HOH HOH . 
DA 4 HOH D 1 1001 6 HOH HOH . 
EA 4 HOH E 1 1001 3 HOH HOH . 
FA 4 HOH F 1 1001 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C27 PEE . . . W 3 209.02 204.162 192.414 1 90.34 ? C27 PEE 901 F 1 
HETATM 2 C C26 PEE . . . W 3 208.029 203.083 192.034 1 92.94 ? C26 PEE 901 F 1 
HETATM 3 C C25 PEE . . . W 3 207.946 201.972 193.042 1 91.98 ? C25 PEE 901 F 1 
HETATM 4 C C24 PEE . . . W 3 207.423 200.667 192.526 1 92.03 ? C24 PEE 901 F 1 
HETATM 5 C C23 PEE . . . W 3 207.994 200.293 191.194 1 89.73 ? C23 PEE 901 F 1 
HETATM 6 C C22 PEE . . . W 3 207.943 198.817 190.893 1 89.12 ? C22 PEE 901 F 1 
HETATM 7 C C21 PEE . . . W 3 206.56 198.218 190.913 1 88.46 ? C21 PEE 901 F 1 
HETATM 8 C C20 PEE . . . W 3 206.51 196.786 190.443 1 89.96 ? C20 PEE 901 F 1 
HETATM 9 C C19 PEE . . . W 3 205.124 196.203 190.362 1 89.09 ? C19 PEE 901 F 1 
HETATM 10 C C18 PEE . . . W 3 205.055 194.876 189.65 1 89.35 ? C18 PEE 901 F 1 
HETATM 11 C C17 PEE . . . W 3 205.992 193.832 190.201 1 87.5 ? C17 PEE 901 F 1 
HETATM 12 C C16 PEE . . . W 3 206.024 192.548 189.413 1 86.5 ? C16 PEE 901 F 1 
HETATM 13 C C15 PEE . . . W 3 206.331 192.73 187.948 1 84.27 ? C15 PEE 901 F 1 
HETATM 14 C C14 PEE . . . W 3 206.577 191.443 187.205 1 84.99 ? C14 PEE 901 F 1 
HETATM 15 C C13 PEE . . . W 3 205.478 190.422 187.348 1 86.83 ? C13 PEE 901 F 1 
HETATM 16 C C12 PEE . . . W 3 205.743 189.121 186.611 1 89.62 ? C12 PEE 901 F 1 
HETATM 17 C C11 PEE . . . W 3 205.778 189.299 185.125 1 87.45 ? C11 PEE 901 F 1 
HETATM 18 C C10 PEE . . . W 3 204.417 189.351 184.489 1 90.02 ? C10 PEE 901 F 1 
HETATM 19 O O4 PEE . . . W 3 203.375 189.201 185.072 1 90.86 ? O4 PEE 901 F 1 
HETATM 20 O O2 PEE . . . W 3 204.464 189.572 183.166 1 91.01 ? O2 PEE 901 F 1 
HETATM 21 C C2 PEE . . . W 3 203.585 188.789 182.31 1 89.78 ? C2 PEE 901 F 1 
HETATM 22 C C1 PEE . . . W 3 203.144 189.583 181.099 1 86.15 ? C1 PEE 901 F 1 
HETATM 23 O O3P PEE . . . W 3 204.186 190.464 180.592 1 93.94 ? O3P PEE 901 F 1 
HETATM 24 P P PEE . . . W 3 205.075 190.012 179.333 1 104.36 ? P PEE 901 F 1 
HETATM 25 O O2P PEE . . . W 3 206.206 189.164 179.842 1 88.15 ? O2P PEE 901 F 1 
HETATM 26 O O1P PEE . . . W 3 205.372 191.252 178.537 1 89.44 ? O1P PEE 901 F 1 
HETATM 27 O O4P PEE . . . W 3 204.074 189.097 178.471 1 95.96 ? O4P PEE 901 F 1 
HETATM 28 C C4 PEE . . . W 3 204.379 188.808 177.076 1 87.09 ? C4 PEE 901 F 1 
HETATM 29 C C5 PEE . . . W 3 205.292 187.615 176.953 1 86.54 ? C5 PEE 901 F 1 
HETATM 30 N N PEE . . . W 3 206.7 187.96 177.249 1 87.33 ? N PEE 901 F 1 
HETATM 31 C C3 PEE . . . W 3 204.218 187.456 181.978 1 94.18 ? C3 PEE 901 F 1 
HETATM 32 O O3 PEE . . . W 3 204.161 186.627 183.16 1 93.95 ? O3 PEE 901 F 1 
HETATM 33 C C30 PEE . . . W 3 204.838 185.484 183.133 1 89.17 ? C30 PEE 901 F 1 
HETATM 34 O O5 PEE . . . W 3 205.399 185.065 182.155 1 90.64 ? O5 PEE 901 F 1 
HETATM 35 C C31 PEE . . . W 3 204.796 184.809 184.474 1 85.35 ? C31 PEE 901 F 1 
HETATM 36 C C32 PEE . . . W 3 205.55 183.52 184.524 1 85.04 ? C32 PEE 901 F 1 
HETATM 37 C C33 PEE . . . W 3 205.626 182.954 185.93 1 89.46 ? C33 PEE 901 F 1 
HETATM 38 C C34 PEE . . . W 3 206.01 183.97 186.977 1 88.58 ? C34 PEE 901 F 1 
HETATM 39 C C35 PEE . . . W 3 206.23 183.396 188.353 1 88.37 ? C35 PEE 901 F 1 
HETATM 40 C C36 PEE . . . W 3 207.421 182.477 188.465 1 85.5 ? C36 PEE 901 F 1 
HETATM 41 C C37 PEE . . . W 3 207.63 181.918 189.848 1 83.95 ? C37 PEE 901 F 1 
HETATM 42 C C38 PEE . . . W 3 207.68 182.966 190.931 1 86.33 ? C38 PEE 901 F 1 
HETATM 43 C C39 PEE . . . W 3 207.745 182.409 192.331 1 89.15 ? C39 PEE 901 F 1 
HETATM 44 C C40 PEE . . . W 3 207.722 183.459 193.414 1 86.34 ? C40 PEE 901 F 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    33 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           44 
#