data_8DR8
#
_model_server_result.job_id            Q9szsWzi3kHIhWYsXChRsQ 
_model_server_result.datetime_utc      '2024-10-15 11:28:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8dr8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":902}' 
#
_entry.id    8DR8 
#
_exptl.entry_id    8DR8 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    20 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8DR8 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DR8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 54 1_555 A SG CYS 402 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf2 A SG CYS 57 A CYS 57 1_555 A SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 A SG CYS 205 A CYS 113 1_555 A SG CYS 387 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 B SG CYS 54 B CYS 54 1_555 B SG CYS 402 B CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 B SG CYS 57 B CYS 57 1_555 B SG CYS 65 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 B SG CYS 205 B CYS 113 1_555 B SG CYS 387 B CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 C SG CYS 54 C CYS 54 1_555 C SG CYS 402 C CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf8 C SG CYS 57 C CYS 57 1_555 C SG CYS 65 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf9 C SG CYS 205 C CYS 113 1_555 C SG CYS 387 C CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 D SG CYS 54 D CYS 54 1_555 D SG CYS 402 D CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 D SG CYS 57 D CYS 57 1_555 D SG CYS 65 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf12 D SG CYS 205 D CYS 113 1_555 D SG CYS 387 D CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 E SG CYS 54 E CYS 54 1_555 E SG CYS 402 E CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf14 E SG CYS 57 E CYS 57 1_555 E SG CYS 65 E CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf15 E SG CYS 205 E CYS 113 1_555 E SG CYS 387 E CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf16 F SG CYS 54 F CYS 54 1_555 F SG CYS 308 F CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf17 F SG CYS 115 F CYS 115 1_555 F SG CYS 293 F CYS 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     8DR8 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 PEE A 1 901 901 PEE PEE . 
H 3 PEE A 1 902 902 PEE PEE . 
I 3 PEE A 1 903 903 PEE PEE . 
J 3 PEE B 1 901 901 PEE PEE . 
K 3 PEE B 1 902 902 PEE PEE . 
L 3 PEE B 1 903 903 PEE PEE . 
M 3 PEE B 1 904 901 PEE PEE . 
N 3 PEE C 1 901 901 PEE PEE . 
O 3 PEE C 1 902 902 PEE PEE . 
P 3 PEE D 1 901 901 PEE PEE . 
Q 3 PEE D 1 902 902 PEE PEE . 
R 3 PEE D 1 903 903 PEE PEE . 
S 3 PEE D 1 904 903 PEE PEE . 
T 3 PEE E 1 901 901 PEE PEE . 
U 3 PEE E 1 902 902 PEE PEE . 
V 3 PEE E 1 903 903 PEE PEE . 
W 3 PEE F 1 901 901 PEE PEE . 
X 3 PEE F 1 902 902 PEE PEE . 
Y 3 PEE F 1 903 903 PEE PEE . 
Z 3 PEE F 1 904 902 PEE PEE . 
AA 4 HOH A 1 1001 1 HOH HOH . 
BA 4 HOH B 1 1001 4 HOH HOH . 
CA 4 HOH C 1 1001 5 HOH HOH . 
DA 4 HOH D 1 1001 6 HOH HOH . 
EA 4 HOH E 1 1001 3 HOH HOH . 
FA 4 HOH F 1 1001 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C20 PEE . . . H 3 250.918 208.986 194.543 1 64.55 ? C20 PEE 902 A 1 
HETATM 2 C C19 PEE . . . H 3 251.506 208.066 193.478 1 70.16 ? C19 PEE 902 A 1 
HETATM 3 C C18 PEE . . . H 3 250.528 207.833 192.337 1 72.29 ? C18 PEE 902 A 1 
HETATM 4 C C17 PEE . . . H 3 251.003 206.751 191.378 1 67.84 ? C17 PEE 902 A 1 
HETATM 5 C C16 PEE . . . H 3 250.241 206.892 190.061 1 67.42 ? C16 PEE 902 A 1 
HETATM 6 C C15 PEE . . . H 3 249.431 205.653 189.715 1 67.45 ? C15 PEE 902 A 1 
HETATM 7 C C14 PEE . . . H 3 248.852 205.739 188.303 1 65.14 ? C14 PEE 902 A 1 
HETATM 8 C C13 PEE . . . H 3 249.422 204.684 187.362 1 63.94 ? C13 PEE 902 A 1 
HETATM 9 C C12 PEE . . . H 3 248.782 204.781 185.979 1 63.22 ? C12 PEE 902 A 1 
HETATM 10 C C11 PEE . . . H 3 249.225 203.636 185.069 1 67.6 ? C11 PEE 902 A 1 
HETATM 11 C C10 PEE . . . H 3 249.015 204.029 183.635 1 75.07 ? C10 PEE 902 A 1 
HETATM 12 O O4 PEE . . . H 3 248.464 203.063 182.86 1 70.91 ? O4 PEE 902 A 1 
HETATM 13 O O2 PEE . . . H 3 249.303 205.113 183.166 1 75.64 ? O2 PEE 902 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           13 
#