data_8DR8
#
_model_server_result.job_id            lSkY-Drv5AgKZVOwvKcBDQ 
_model_server_result.datetime_utc      '2024-10-15 11:21:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8dr8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":904}' 
#
_entry.id    8DR8 
#
_exptl.entry_id    8DR8 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    20 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8DR8 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DR8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 54 1_555 A SG CYS 402 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf2 A SG CYS 57 A CYS 57 1_555 A SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 A SG CYS 205 A CYS 113 1_555 A SG CYS 387 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf4 B SG CYS 54 B CYS 54 1_555 B SG CYS 402 B CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 B SG CYS 57 B CYS 57 1_555 B SG CYS 65 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 B SG CYS 205 B CYS 113 1_555 B SG CYS 387 B CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 C SG CYS 54 C CYS 54 1_555 C SG CYS 402 C CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf8 C SG CYS 57 C CYS 57 1_555 C SG CYS 65 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf9 C SG CYS 205 C CYS 113 1_555 C SG CYS 387 C CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 D SG CYS 54 D CYS 54 1_555 D SG CYS 402 D CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 D SG CYS 57 D CYS 57 1_555 D SG CYS 65 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf12 D SG CYS 205 D CYS 113 1_555 D SG CYS 387 D CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 E SG CYS 54 E CYS 54 1_555 E SG CYS 402 E CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf14 E SG CYS 57 E CYS 57 1_555 E SG CYS 65 E CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf15 E SG CYS 205 E CYS 113 1_555 E SG CYS 387 E CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf16 F SG CYS 54 F CYS 54 1_555 F SG CYS 308 F CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf17 F SG CYS 115 F CYS 115 1_555 F SG CYS 293 F CYS 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     8DR8 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 PEE A 1 901 901 PEE PEE . 
H 3 PEE A 1 902 902 PEE PEE . 
I 3 PEE A 1 903 903 PEE PEE . 
J 3 PEE B 1 901 901 PEE PEE . 
K 3 PEE B 1 902 902 PEE PEE . 
L 3 PEE B 1 903 903 PEE PEE . 
M 3 PEE B 1 904 901 PEE PEE . 
N 3 PEE C 1 901 901 PEE PEE . 
O 3 PEE C 1 902 902 PEE PEE . 
P 3 PEE D 1 901 901 PEE PEE . 
Q 3 PEE D 1 902 902 PEE PEE . 
R 3 PEE D 1 903 903 PEE PEE . 
S 3 PEE D 1 904 903 PEE PEE . 
T 3 PEE E 1 901 901 PEE PEE . 
U 3 PEE E 1 902 902 PEE PEE . 
V 3 PEE E 1 903 903 PEE PEE . 
W 3 PEE F 1 901 901 PEE PEE . 
X 3 PEE F 1 902 902 PEE PEE . 
Y 3 PEE F 1 903 903 PEE PEE . 
Z 3 PEE F 1 904 902 PEE PEE . 
AA 4 HOH A 1 1001 1 HOH HOH . 
BA 4 HOH B 1 1001 4 HOH HOH . 
CA 4 HOH C 1 1001 5 HOH HOH . 
DA 4 HOH D 1 1001 6 HOH HOH . 
EA 4 HOH E 1 1001 3 HOH HOH . 
FA 4 HOH F 1 1001 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C27 PEE . . . M 3 232.745 218.415 187.361 1 103.51 ? C27 PEE 904 B 1 
HETATM 2 C C26 PEE . . . M 3 232.55 216.926 187.161 1 102.61 ? C26 PEE 904 B 1 
HETATM 3 C C25 PEE . . . M 3 231.103 216.61 186.796 1 104.49 ? C25 PEE 904 B 1 
HETATM 4 C C24 PEE . . . M 3 230.158 216.932 187.953 1 102.61 ? C24 PEE 904 B 1 
HETATM 5 C C23 PEE . . . M 3 228.888 216.06 187.973 1 103.73 ? C23 PEE 904 B 1 
HETATM 6 C C22 PEE . . . M 3 228.391 215.792 186.554 1 103.44 ? C22 PEE 904 B 1 
HETATM 7 C C21 PEE . . . M 3 226.972 215.239 186.455 1 103.14 ? C21 PEE 904 B 1 
HETATM 8 C C20 PEE . . . M 3 226.699 214.422 185.197 1 101.92 ? C20 PEE 904 B 1 
HETATM 9 C C19 PEE . . . M 3 225.281 214.624 184.668 1 103.35 ? C19 PEE 904 B 1 
HETATM 10 C C18 PEE . . . M 3 224.675 213.323 184.152 1 103.72 ? C18 PEE 904 B 1 
HETATM 11 C C17 PEE . . . M 3 224.143 213.462 182.729 1 104.54 ? C17 PEE 904 B 1 
HETATM 12 C C16 PEE . . . M 3 223.217 212.285 182.408 1 104.73 ? C16 PEE 904 B 1 
HETATM 13 C C15 PEE . . . M 3 222.184 212.63 181.34 1 105.02 ? C15 PEE 904 B 1 
HETATM 14 C C14 PEE . . . M 3 222.856 213.093 180.04 1 105.19 ? C14 PEE 904 B 1 
HETATM 15 C C13 PEE . . . M 3 221.95 212.982 178.813 1 104.65 ? C13 PEE 904 B 1 
HETATM 16 C C12 PEE . . . M 3 222.77 212.833 177.523 1 102.54 ? C12 PEE 904 B 1 
HETATM 17 C C11 PEE . . . M 3 222.179 213.666 176.376 1 103.98 ? C11 PEE 904 B 1 
HETATM 18 C C10 PEE . . . M 3 222.357 212.948 175.071 1 107.89 ? C10 PEE 904 B 1 
HETATM 19 O O4 PEE . . . M 3 221.714 213.177 174.064 1 105.74 ? O4 PEE 904 B 1 
HETATM 20 O O2 PEE . . . M 3 223.304 211.973 175.086 1 111.17 ? O2 PEE 904 B 1 
HETATM 21 C C2 PEE . . . M 3 223.497 211.211 173.907 1 108.07 ? C2 PEE 904 B 1 
HETATM 22 C C1 PEE . . . M 3 225.032 210.985 173.804 1 106.17 ? C1 PEE 904 B 1 
HETATM 23 O O3P PEE . . . M 3 225.63 212.149 174.259 1 110.17 ? O3P PEE 904 B 1 
HETATM 24 P P PEE . . . M 3 226.748 213.031 173.405 1 117.95 ? P PEE 904 B 1 
HETATM 25 O O2P PEE . . . M 3 226.292 214.451 173.323 1 106.5 ? O2P PEE 904 B 1 
HETATM 26 O O1P PEE . . . M 3 227.416 212.126 172.441 1 107 ? O1P PEE 904 B 1 
HETATM 27 O O4P PEE . . . M 3 227.847 213.034 174.797 1 108.07 ? O4P PEE 904 B 1 
HETATM 28 C C4 PEE . . . M 3 229.142 212.663 174.608 1 106.15 ? C4 PEE 904 B 1 
HETATM 29 C C5 PEE . . . M 3 229.985 213.374 175.707 1 103.98 ? C5 PEE 904 B 1 
HETATM 30 N N PEE . . . M 3 231.078 214.178 175.013 1 102.94 ? N PEE 904 B 1 
HETATM 31 C C3 PEE . . . M 3 222.758 209.861 174.066 1 107.2 ? C3 PEE 904 B 1 
HETATM 32 O O3 PEE . . . M 3 221.637 210.013 174.92 1 110.42 ? O3 PEE 904 B 1 
HETATM 33 C C30 PEE . . . M 3 221.629 209.411 176.134 1 106.05 ? C30 PEE 904 B 1 
HETATM 34 O O5 PEE . . . M 3 222.392 208.49 176.357 1 105.45 ? O5 PEE 904 B 1 
HETATM 35 C C31 PEE . . . M 3 220.627 209.99 177.102 1 102.6 ? C31 PEE 904 B 1 
HETATM 36 C C32 PEE . . . M 3 220.562 209.104 178.35 1 103.93 ? C32 PEE 904 B 1 
HETATM 37 C C33 PEE . . . M 3 220.15 209.83 179.634 1 105.41 ? C33 PEE 904 B 1 
HETATM 38 C C34 PEE . . . M 3 219.677 208.853 180.722 1 104.28 ? C34 PEE 904 B 1 
HETATM 39 C C35 PEE . . . M 3 219.507 209.468 182.115 1 104.93 ? C35 PEE 904 B 1 
HETATM 40 C C36 PEE . . . M 3 218.335 208.833 182.895 1 103.6 ? C36 PEE 904 B 1 
HETATM 41 C C37 PEE . . . M 3 218.743 207.999 184.132 1 102.51 ? C37 PEE 904 B 1 
HETATM 42 C C38 PEE . . . M 3 220.197 207.5 184.097 1 104.31 ? C38 PEE 904 B 1 
HETATM 43 C C39 PEE . . . M 3 220.385 206.126 184.758 1 103.45 ? C39 PEE 904 B 1 
HETATM 44 C C40 PEE . . . M 3 221.55 206.081 185.76 1 102.78 ? C40 PEE 904 B 1 
HETATM 45 C C41 PEE . . . M 3 221.148 206.404 187.206 1 103.18 ? C41 PEE 904 B 1 
HETATM 46 C C42 PEE . . . M 3 222.36 206.578 188.141 1 101.92 ? C42 PEE 904 B 1 
HETATM 47 C C43 PEE . . . M 3 223.444 205.516 187.927 1 103.86 ? C43 PEE 904 B 1 
HETATM 48 C C44 PEE . . . M 3 224.258 205.183 189.183 1 105.25 ? C44 PEE 904 B 1 
HETATM 49 C C45 PEE . . . M 3 225.556 204.412 188.941 1 104.1 ? C45 PEE 904 B 1 
HETATM 50 C C46 PEE . . . M 3 225.868 203.415 190.05 1 102.71 ? C46 PEE 904 B 1 
HETATM 51 C C47 PEE . . . M 3 226.882 202.381 189.595 1 104.16 ? C47 PEE 904 B 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           51 
#