data_8DRL # _model_server_result.job_id MuP3efQ_EWSoaae08dDyeQ _model_server_result.datetime_utc '2024-11-16 07:54:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8drl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 8DRL # _exptl.entry_id 8DRL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DRL _cell.length_a 39.64 _cell.length_b 52.41 _cell.length_c 58.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DRL _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 52.41 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 96 1_555 A SG CYS 96 A CYS 96 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? covale ? covale1 A SG CYS 98 A CYS 98 1_555 B CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.775 ? metalc ? metalc1 A OE1 GLU 4 A GLU 4 1_555 E ZN ZN . A ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc2 A SD MET 7 A MET 7 1_555 B FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc3 A OE1 GLU 8 A GLU 8 1_555 E ZN ZN . A ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc4 A OE1 GLU 57 A GLU 57 1_555 D ZN ZN . A ZN 203 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc5 A NE2 HIS 60 A HIS 60 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc6 A NE2 HIS 60 A HIS 60 1_555 C ZN ZN . A ZN 202 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc7 A ND1 HIS 60 A HIS 60 1_555 D ZN ZN . A ZN 203 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc8 A NE2 HIS 63 A HIS 63 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc9 A OE2 GLU 86 A GLU 86 1_555 E ZN ZN . A ZN 204 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc10 A NE2 HIS 102 A HIS 102 1_555 B FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc11 A NE2 HIS 104 A HIS 104 1_555 D ZN ZN . A ZN 203 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc12 B O1A HEC . A HEC 201 1_555 E ZN ZN . A ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc13 C ZN ZN . A ZN 202 1_555 F O HOH . A HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc14 C ZN ZN . A ZN 202 1_555 F O HOH . A HOH 393 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8DRL _atom_sites.fract_transf_matrix[1][1] 0.025227 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017056 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 201 150 HEC HEM . C 3 ZN A 1 202 1 ZN ZN . D 3 ZN A 1 203 2 ZN ZN . E 3 ZN A 1 204 3 ZN ZN . F 4 HOH A 1 301 79 HOH HOH . F 4 HOH A 2 302 111 HOH HOH . F 4 HOH A 3 303 21 HOH HOH . F 4 HOH A 4 304 113 HOH HOH . F 4 HOH A 5 305 131 HOH HOH . F 4 HOH A 6 306 116 HOH HOH . F 4 HOH A 7 307 99 HOH HOH . F 4 HOH A 8 308 12 HOH HOH . F 4 HOH A 9 309 122 HOH HOH . F 4 HOH A 10 310 26 HOH HOH . F 4 HOH A 11 311 73 HOH HOH . F 4 HOH A 12 312 84 HOH HOH . F 4 HOH A 13 313 126 HOH HOH . F 4 HOH A 14 314 41 HOH HOH . F 4 HOH A 15 315 71 HOH HOH . F 4 HOH A 16 316 58 HOH HOH . F 4 HOH A 17 317 74 HOH HOH . F 4 HOH A 18 318 102 HOH HOH . F 4 HOH A 19 319 16 HOH HOH . F 4 HOH A 20 320 90 HOH HOH . F 4 HOH A 21 321 62 HOH HOH . F 4 HOH A 22 322 119 HOH HOH . F 4 HOH A 23 323 14 HOH HOH . F 4 HOH A 24 324 20 HOH HOH . F 4 HOH A 25 325 28 HOH HOH . F 4 HOH A 26 326 49 HOH HOH . F 4 HOH A 27 327 3 HOH HOH . F 4 HOH A 28 328 39 HOH HOH . F 4 HOH A 29 329 5 HOH HOH . F 4 HOH A 30 330 19 HOH HOH . F 4 HOH A 31 331 82 HOH HOH . F 4 HOH A 32 332 36 HOH HOH . F 4 HOH A 33 333 17 HOH HOH . F 4 HOH A 34 334 11 HOH HOH . F 4 HOH A 35 335 40 HOH HOH . F 4 HOH A 36 336 104 HOH HOH . F 4 HOH A 37 337 29 HOH HOH . F 4 HOH A 38 338 33 HOH HOH . F 4 HOH A 39 339 114 HOH HOH . F 4 HOH A 40 340 37 HOH HOH . F 4 HOH A 41 341 101 HOH HOH . F 4 HOH A 42 342 8 HOH HOH . F 4 HOH A 43 343 94 HOH HOH . F 4 HOH A 44 344 10 HOH HOH . F 4 HOH A 45 345 48 HOH HOH . F 4 HOH A 46 346 15 HOH HOH . F 4 HOH A 47 347 44 HOH HOH . F 4 HOH A 48 348 72 HOH HOH . F 4 HOH A 49 349 31 HOH HOH . F 4 HOH A 50 350 76 HOH HOH . F 4 HOH A 51 351 70 HOH HOH . F 4 HOH A 52 352 27 HOH HOH . F 4 HOH A 53 353 47 HOH HOH . F 4 HOH A 54 354 52 HOH HOH . F 4 HOH A 55 355 25 HOH HOH . F 4 HOH A 56 356 45 HOH HOH . F 4 HOH A 57 357 91 HOH HOH . F 4 HOH A 58 358 83 HOH HOH . F 4 HOH A 59 359 78 HOH HOH . F 4 HOH A 60 360 2 HOH HOH . F 4 HOH A 61 361 129 HOH HOH . F 4 HOH A 62 362 63 HOH HOH . F 4 HOH A 63 363 88 HOH HOH . F 4 HOH A 64 364 30 HOH HOH . F 4 HOH A 65 365 112 HOH HOH . F 4 HOH A 66 366 22 HOH HOH . F 4 HOH A 67 367 105 HOH HOH . F 4 HOH A 68 368 38 HOH HOH . F 4 HOH A 69 369 121 HOH HOH . F 4 HOH A 70 370 89 HOH HOH . F 4 HOH A 71 371 128 HOH HOH . F 4 HOH A 72 372 107 HOH HOH . F 4 HOH A 73 373 6 HOH HOH . F 4 HOH A 74 374 4 HOH HOH . F 4 HOH A 75 375 66 HOH HOH . F 4 HOH A 76 376 106 HOH HOH . F 4 HOH A 77 377 46 HOH HOH . F 4 HOH A 78 378 13 HOH HOH . F 4 HOH A 79 379 7 HOH HOH . F 4 HOH A 80 380 9 HOH HOH . F 4 HOH A 81 381 60 HOH HOH . F 4 HOH A 82 382 43 HOH HOH . F 4 HOH A 83 383 53 HOH HOH . F 4 HOH A 84 384 18 HOH HOH . F 4 HOH A 85 385 100 HOH HOH . F 4 HOH A 86 386 86 HOH HOH . F 4 HOH A 87 387 23 HOH HOH . F 4 HOH A 88 388 97 HOH HOH . F 4 HOH A 89 389 80 HOH HOH . F 4 HOH A 90 390 59 HOH HOH . F 4 HOH A 91 391 120 HOH HOH . F 4 HOH A 92 392 64 HOH HOH . F 4 HOH A 93 393 1 HOH HOH . F 4 HOH A 94 394 87 HOH HOH . F 4 HOH A 95 395 51 HOH HOH . F 4 HOH A 96 396 57 HOH HOH . F 4 HOH A 97 397 92 HOH HOH . F 4 HOH A 98 398 85 HOH HOH . F 4 HOH A 99 399 67 HOH HOH . F 4 HOH A 100 400 32 HOH HOH . F 4 HOH A 101 401 69 HOH HOH . F 4 HOH A 102 402 50 HOH HOH . F 4 HOH A 103 403 96 HOH HOH . F 4 HOH A 104 404 123 HOH HOH . F 4 HOH A 105 405 55 HOH HOH . F 4 HOH A 106 406 109 HOH HOH . F 4 HOH A 107 407 42 HOH HOH . F 4 HOH A 108 408 108 HOH HOH . F 4 HOH A 109 409 118 HOH HOH . F 4 HOH A 110 410 77 HOH HOH . F 4 HOH A 111 411 56 HOH HOH . F 4 HOH A 112 412 130 HOH HOH . F 4 HOH A 113 413 110 HOH HOH . F 4 HOH A 114 414 75 HOH HOH . F 4 HOH A 115 415 127 HOH HOH . F 4 HOH A 116 416 117 HOH HOH . F 4 HOH A 117 417 125 HOH HOH . F 4 HOH A 118 418 81 HOH HOH . F 4 HOH A 119 419 61 HOH HOH . F 4 HOH A 120 420 93 HOH HOH . F 4 HOH A 121 421 65 HOH HOH . F 4 HOH A 122 422 35 HOH HOH . F 4 HOH A 123 423 98 HOH HOH . F 4 HOH A 124 424 124 HOH HOH . F 4 HOH A 125 425 68 HOH HOH . F 4 HOH A 126 426 115 HOH HOH . F 4 HOH A 127 427 54 HOH HOH . F 4 HOH A 128 428 95 HOH HOH . F 4 HOH A 129 429 24 HOH HOH . F 4 HOH A 130 430 103 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 19.305 _atom_site.Cartn_y 26.596 _atom_site.Cartn_z 5.134 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #