data_8DRV # _model_server_result.job_id XMFDxbnhnlssF2CiCjAxJA _model_server_result.datetime_utc '2024-11-14 20:52:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8drv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 8DRV # _exptl.entry_id 8DRV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8DRV _cell.length_a 85.788 _cell.length_b 117.202 _cell.length_c 121.381 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DRV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F,H 1 1 B,D,E,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 8DRV _atom_sites.fract_transf_matrix[1][1] 0.011657 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008532 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008239 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 1PE B 1 401 401 1PE 1PE . F 3 HOH A 1 401 234 HOH HOH . F 3 HOH A 2 402 206 HOH HOH . F 3 HOH A 3 403 124 HOH HOH . F 3 HOH A 4 404 30 HOH HOH . F 3 HOH A 5 405 146 HOH HOH . F 3 HOH A 6 406 22 HOH HOH . F 3 HOH A 7 407 120 HOH HOH . F 3 HOH A 8 408 8 HOH HOH . F 3 HOH A 9 409 245 HOH HOH . F 3 HOH A 10 410 78 HOH HOH . F 3 HOH A 11 411 66 HOH HOH . F 3 HOH A 12 412 163 HOH HOH . F 3 HOH A 13 413 5 HOH HOH . F 3 HOH A 14 414 132 HOH HOH . F 3 HOH A 15 415 37 HOH HOH . F 3 HOH A 16 416 43 HOH HOH . F 3 HOH A 17 417 76 HOH HOH . F 3 HOH A 18 418 201 HOH HOH . F 3 HOH A 19 419 224 HOH HOH . F 3 HOH A 20 420 247 HOH HOH . F 3 HOH A 21 421 20 HOH HOH . F 3 HOH A 22 422 63 HOH HOH . F 3 HOH A 23 423 222 HOH HOH . F 3 HOH A 24 424 151 HOH HOH . F 3 HOH A 25 425 145 HOH HOH . F 3 HOH A 26 426 62 HOH HOH . F 3 HOH A 27 427 158 HOH HOH . F 3 HOH A 28 428 142 HOH HOH . F 3 HOH A 29 429 110 HOH HOH . F 3 HOH A 30 430 4 HOH HOH . F 3 HOH A 31 431 65 HOH HOH . F 3 HOH A 32 432 106 HOH HOH . F 3 HOH A 33 433 38 HOH HOH . F 3 HOH A 34 434 72 HOH HOH . F 3 HOH A 35 435 14 HOH HOH . F 3 HOH A 36 436 12 HOH HOH . F 3 HOH A 37 437 17 HOH HOH . F 3 HOH A 38 438 51 HOH HOH . F 3 HOH A 39 439 11 HOH HOH . F 3 HOH A 40 440 98 HOH HOH . F 3 HOH A 41 441 7 HOH HOH . F 3 HOH A 42 442 166 HOH HOH . F 3 HOH A 43 443 134 HOH HOH . F 3 HOH A 44 444 190 HOH HOH . F 3 HOH A 45 445 228 HOH HOH . F 3 HOH A 46 446 104 HOH HOH . F 3 HOH A 47 447 92 HOH HOH . F 3 HOH A 48 448 73 HOH HOH . F 3 HOH A 49 449 86 HOH HOH . F 3 HOH A 50 450 95 HOH HOH . F 3 HOH A 51 451 226 HOH HOH . F 3 HOH A 52 452 74 HOH HOH . F 3 HOH A 53 453 160 HOH HOH . F 3 HOH A 54 454 233 HOH HOH . F 3 HOH A 55 455 25 HOH HOH . F 3 HOH A 56 456 193 HOH HOH . F 3 HOH A 57 457 214 HOH HOH . F 3 HOH A 58 458 203 HOH HOH . F 3 HOH A 59 459 210 HOH HOH . F 3 HOH A 60 460 156 HOH HOH . F 3 HOH A 61 461 179 HOH HOH . F 3 HOH A 62 462 170 HOH HOH . F 3 HOH A 63 463 125 HOH HOH . F 3 HOH A 64 464 240 HOH HOH . F 3 HOH A 65 465 227 HOH HOH . F 3 HOH A 66 466 61 HOH HOH . F 3 HOH A 67 467 173 HOH HOH . F 3 HOH A 68 468 204 HOH HOH . F 3 HOH A 69 469 96 HOH HOH . F 3 HOH A 70 470 89 HOH HOH . F 3 HOH A 71 471 191 HOH HOH . G 3 HOH B 1 501 250 HOH HOH . G 3 HOH B 2 502 121 HOH HOH . G 3 HOH B 3 503 246 HOH HOH . G 3 HOH B 4 504 29 HOH HOH . G 3 HOH B 5 505 174 HOH HOH . G 3 HOH B 6 506 105 HOH HOH . G 3 HOH B 7 507 229 HOH HOH . G 3 HOH B 8 508 60 HOH HOH . G 3 HOH B 9 509 126 HOH HOH . G 3 HOH B 10 510 141 HOH HOH . G 3 HOH B 11 511 77 HOH HOH . G 3 HOH B 12 512 178 HOH HOH . G 3 HOH B 13 513 172 HOH HOH . G 3 HOH B 14 514 244 HOH HOH . G 3 HOH B 15 515 223 HOH HOH . G 3 HOH B 16 516 39 HOH HOH . G 3 HOH B 17 517 221 HOH HOH . G 3 HOH B 18 518 1 HOH HOH . G 3 HOH B 19 519 117 HOH HOH . G 3 HOH B 20 520 64 HOH HOH . G 3 HOH B 21 521 129 HOH HOH . G 3 HOH B 22 522 136 HOH HOH . G 3 HOH B 23 523 47 HOH HOH . G 3 HOH B 24 524 109 HOH HOH . G 3 HOH B 25 525 10 HOH HOH . G 3 HOH B 26 526 57 HOH HOH . G 3 HOH B 27 527 231 HOH HOH . G 3 HOH B 28 528 35 HOH HOH . G 3 HOH B 29 529 56 HOH HOH . G 3 HOH B 30 530 157 HOH HOH . G 3 HOH B 31 531 135 HOH HOH . G 3 HOH B 32 532 103 HOH HOH . G 3 HOH B 33 533 238 HOH HOH . G 3 HOH B 34 534 53 HOH HOH . G 3 HOH B 35 535 31 HOH HOH . G 3 HOH B 36 536 100 HOH HOH . G 3 HOH B 37 537 2 HOH HOH . G 3 HOH B 38 538 44 HOH HOH . G 3 HOH B 39 539 147 HOH HOH . G 3 HOH B 40 540 202 HOH HOH . G 3 HOH B 41 541 200 HOH HOH . G 3 HOH B 42 542 21 HOH HOH . G 3 HOH B 43 543 194 HOH HOH . G 3 HOH B 44 544 114 HOH HOH . G 3 HOH B 45 545 112 HOH HOH . G 3 HOH B 46 546 113 HOH HOH . G 3 HOH B 47 547 133 HOH HOH . G 3 HOH B 48 548 138 HOH HOH . G 3 HOH B 49 549 182 HOH HOH . G 3 HOH B 50 550 150 HOH HOH . G 3 HOH B 51 551 46 HOH HOH . G 3 HOH B 52 552 128 HOH HOH . G 3 HOH B 53 553 27 HOH HOH . G 3 HOH B 54 554 144 HOH HOH . G 3 HOH B 55 555 235 HOH HOH . G 3 HOH B 56 556 115 HOH HOH . G 3 HOH B 57 557 54 HOH HOH . G 3 HOH B 58 558 102 HOH HOH . G 3 HOH B 59 559 127 HOH HOH . G 3 HOH B 60 560 108 HOH HOH . G 3 HOH B 61 561 59 HOH HOH . G 3 HOH B 62 562 198 HOH HOH . G 3 HOH B 63 563 218 HOH HOH . G 3 HOH B 64 564 181 HOH HOH . G 3 HOH B 65 565 139 HOH HOH . G 3 HOH B 66 566 33 HOH HOH . G 3 HOH B 67 567 155 HOH HOH . G 3 HOH B 68 568 215 HOH HOH . G 3 HOH B 69 569 236 HOH HOH . G 3 HOH B 70 570 177 HOH HOH . G 3 HOH B 71 571 97 HOH HOH . G 3 HOH B 72 572 48 HOH HOH . G 3 HOH B 73 573 208 HOH HOH . G 3 HOH B 74 574 192 HOH HOH . G 3 HOH B 75 575 152 HOH HOH . H 3 HOH C 1 401 122 HOH HOH . H 3 HOH C 2 402 209 HOH HOH . H 3 HOH C 3 403 15 HOH HOH . H 3 HOH C 4 404 58 HOH HOH . H 3 HOH C 5 405 140 HOH HOH . H 3 HOH C 6 406 148 HOH HOH . H 3 HOH C 7 407 243 HOH HOH . H 3 HOH C 8 408 164 HOH HOH . H 3 HOH C 9 409 16 HOH HOH . H 3 HOH C 10 410 241 HOH HOH . H 3 HOH C 11 411 83 HOH HOH . H 3 HOH C 12 412 13 HOH HOH . H 3 HOH C 13 413 79 HOH HOH . H 3 HOH C 14 414 212 HOH HOH . H 3 HOH C 15 415 67 HOH HOH . H 3 HOH C 16 416 94 HOH HOH . H 3 HOH C 17 417 87 HOH HOH . H 3 HOH C 18 418 119 HOH HOH . H 3 HOH C 19 419 116 HOH HOH . H 3 HOH C 20 420 28 HOH HOH . H 3 HOH C 21 421 6 HOH HOH . H 3 HOH C 22 422 213 HOH HOH . H 3 HOH C 23 423 207 HOH HOH . H 3 HOH C 24 424 42 HOH HOH . H 3 HOH C 25 425 225 HOH HOH . H 3 HOH C 26 426 232 HOH HOH . H 3 HOH C 27 427 85 HOH HOH . H 3 HOH C 28 428 171 HOH HOH . H 3 HOH C 29 429 185 HOH HOH . H 3 HOH C 30 430 34 HOH HOH . H 3 HOH C 31 431 242 HOH HOH . H 3 HOH C 32 432 36 HOH HOH . H 3 HOH C 33 433 130 HOH HOH . H 3 HOH C 34 434 237 HOH HOH . H 3 HOH C 35 435 154 HOH HOH . H 3 HOH C 36 436 24 HOH HOH . H 3 HOH C 37 437 80 HOH HOH . H 3 HOH C 38 438 50 HOH HOH . H 3 HOH C 39 439 81 HOH HOH . H 3 HOH C 40 440 68 HOH HOH . H 3 HOH C 41 441 186 HOH HOH . H 3 HOH C 42 442 9 HOH HOH . H 3 HOH C 43 443 162 HOH HOH . H 3 HOH C 44 444 195 HOH HOH . H 3 HOH C 45 445 167 HOH HOH . H 3 HOH C 46 446 107 HOH HOH . H 3 HOH C 47 447 248 HOH HOH . H 3 HOH C 48 448 26 HOH HOH . H 3 HOH C 49 449 32 HOH HOH . H 3 HOH C 50 450 84 HOH HOH . H 3 HOH C 51 451 219 HOH HOH . H 3 HOH C 52 452 168 HOH HOH . H 3 HOH C 53 453 220 HOH HOH . H 3 HOH C 54 454 19 HOH HOH . H 3 HOH C 55 455 23 HOH HOH . H 3 HOH C 56 456 149 HOH HOH . H 3 HOH C 57 457 93 HOH HOH . H 3 HOH C 58 458 184 HOH HOH . H 3 HOH C 59 459 211 HOH HOH . H 3 HOH C 60 460 69 HOH HOH . H 3 HOH C 61 461 118 HOH HOH . I 3 HOH D 1 401 216 HOH HOH . I 3 HOH D 2 402 189 HOH HOH . I 3 HOH D 3 403 131 HOH HOH . I 3 HOH D 4 404 75 HOH HOH . I 3 HOH D 5 405 217 HOH HOH . I 3 HOH D 6 406 249 HOH HOH . I 3 HOH D 7 407 180 HOH HOH . I 3 HOH D 8 408 239 HOH HOH . I 3 HOH D 9 409 165 HOH HOH . I 3 HOH D 10 410 159 HOH HOH . I 3 HOH D 11 411 45 HOH HOH . I 3 HOH D 12 412 175 HOH HOH . I 3 HOH D 13 413 3 HOH HOH . I 3 HOH D 14 414 52 HOH HOH . I 3 HOH D 15 415 176 HOH HOH . I 3 HOH D 16 416 40 HOH HOH . I 3 HOH D 17 417 82 HOH HOH . I 3 HOH D 18 418 49 HOH HOH . I 3 HOH D 19 419 71 HOH HOH . I 3 HOH D 20 420 111 HOH HOH . I 3 HOH D 21 421 18 HOH HOH . I 3 HOH D 22 422 90 HOH HOH . I 3 HOH D 23 423 41 HOH HOH . I 3 HOH D 24 424 137 HOH HOH . I 3 HOH D 25 425 55 HOH HOH . I 3 HOH D 26 426 99 HOH HOH . I 3 HOH D 27 427 153 HOH HOH . I 3 HOH D 28 428 91 HOH HOH . I 3 HOH D 29 429 187 HOH HOH . I 3 HOH D 30 430 70 HOH HOH . I 3 HOH D 31 431 88 HOH HOH . I 3 HOH D 32 432 143 HOH HOH . I 3 HOH D 33 433 101 HOH HOH . I 3 HOH D 34 434 161 HOH HOH . I 3 HOH D 35 435 230 HOH HOH . I 3 HOH D 36 436 183 HOH HOH . I 3 HOH D 37 437 205 HOH HOH . I 3 HOH D 38 438 197 HOH HOH . I 3 HOH D 39 439 169 HOH HOH . I 3 HOH D 40 440 196 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH3 1PE . . . E 2 37.585 -15.562 39.464 1 58.81 ? OH3 1PE 401 B 1 HETATM 2 C C13 1PE . . . E 2 39.099 -14.485 41.002 1 55.82 ? C13 1PE 401 B 1 HETATM 3 C C23 1PE . . . E 2 37.674 -14.76 40.636 1 59.93 ? C23 1PE 401 B 1 HETATM 4 O OH4 1PE . . . E 2 39.661 -15.529 41.812 1 61.11 ? OH4 1PE 401 B 1 HETATM 5 C C14 1PE . . . E 2 41.685 -16.44 42.854 1 49.78 ? C14 1PE 401 B 1 HETATM 6 C C24 1PE . . . E 2 41.03 -15.294 42.138 1 49.99 ? C24 1PE 401 B 1 HETATM 7 O OH5 1PE . . . E 2 40.846 -17.588 42.969 1 55.29 ? OH5 1PE 401 B 1 HETATM 8 C C15 1PE . . . E 2 40.278 -19.581 44.222 1 55.38 ? C15 1PE 401 B 1 HETATM 9 C C25 1PE . . . E 2 41.014 -18.278 44.207 1 53.03 ? C25 1PE 401 B 1 HETATM 10 O OH6 1PE . . . E 2 39.205 -19.557 45.161 1 56.07 ? OH6 1PE 401 B 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #