data_8DRY # _model_server_result.job_id nMg8wSXuh1NbosfoWh1rGA _model_server_result.datetime_utc '2024-11-14 21:07:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dry # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":401}' # _entry.id 8DRY # _exptl.entry_id 8DRY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.73 _cell.angle_gamma 90 _cell.entry_id 8DRY _cell.length_a 67.329 _cell.length_b 107.923 _cell.length_c 277.248 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DRY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 PISA dimeric 2 author_and_software_defined_assembly 5 PISA dimeric 2 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,M,O,P 1 1 C,D,Q,R 2 1 E,F,N,S,T 3 1 G,H,U,V 4 1 I,J,W,X 5 1 K,L,Y,Z 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 8DRY _atom_sites.fract_transf_matrix[1][1] 0.014852 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000189 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009266 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003607 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 PEG B 1 401 1 PEG PEG . N 2 PEG E 1 401 2 PEG PEG . O 3 HOH A 1 401 21 HOH HOH . O 3 HOH A 2 402 149 HOH HOH . O 3 HOH A 3 403 140 HOH HOH . O 3 HOH A 4 404 1 HOH HOH . O 3 HOH A 5 405 50 HOH HOH . O 3 HOH A 6 406 4 HOH HOH . O 3 HOH A 7 407 97 HOH HOH . O 3 HOH A 8 408 8 HOH HOH . O 3 HOH A 9 409 115 HOH HOH . O 3 HOH A 10 410 24 HOH HOH . O 3 HOH A 11 411 111 HOH HOH . O 3 HOH A 12 412 101 HOH HOH . O 3 HOH A 13 413 161 HOH HOH . O 3 HOH A 14 414 128 HOH HOH . O 3 HOH A 15 415 99 HOH HOH . O 3 HOH A 16 416 117 HOH HOH . O 3 HOH A 17 417 20 HOH HOH . O 3 HOH A 18 418 145 HOH HOH . O 3 HOH A 19 419 25 HOH HOH . O 3 HOH A 20 420 65 HOH HOH . O 3 HOH A 21 421 133 HOH HOH . O 3 HOH A 22 422 139 HOH HOH . O 3 HOH A 23 423 60 HOH HOH . P 3 HOH B 1 501 35 HOH HOH . P 3 HOH B 2 502 18 HOH HOH . P 3 HOH B 3 503 62 HOH HOH . P 3 HOH B 4 504 56 HOH HOH . P 3 HOH B 5 505 13 HOH HOH . P 3 HOH B 6 506 89 HOH HOH . P 3 HOH B 7 507 141 HOH HOH . P 3 HOH B 8 508 26 HOH HOH . P 3 HOH B 9 509 168 HOH HOH . P 3 HOH B 10 510 79 HOH HOH . P 3 HOH B 11 511 155 HOH HOH . P 3 HOH B 12 512 15 HOH HOH . P 3 HOH B 13 513 57 HOH HOH . P 3 HOH B 14 514 32 HOH HOH . P 3 HOH B 15 515 114 HOH HOH . P 3 HOH B 16 516 6 HOH HOH . P 3 HOH B 17 517 163 HOH HOH . P 3 HOH B 18 518 159 HOH HOH . P 3 HOH B 19 519 10 HOH HOH . P 3 HOH B 20 520 95 HOH HOH . P 3 HOH B 21 521 47 HOH HOH . P 3 HOH B 22 522 136 HOH HOH . P 3 HOH B 23 523 84 HOH HOH . P 3 HOH B 24 524 91 HOH HOH . P 3 HOH B 25 525 122 HOH HOH . P 3 HOH B 26 526 131 HOH HOH . P 3 HOH B 27 527 173 HOH HOH . P 3 HOH B 28 528 151 HOH HOH . Q 3 HOH C 1 401 48 HOH HOH . Q 3 HOH C 2 402 116 HOH HOH . Q 3 HOH C 3 403 67 HOH HOH . Q 3 HOH C 4 404 150 HOH HOH . Q 3 HOH C 5 405 17 HOH HOH . Q 3 HOH C 6 406 88 HOH HOH . Q 3 HOH C 7 407 158 HOH HOH . Q 3 HOH C 8 408 132 HOH HOH . Q 3 HOH C 9 409 102 HOH HOH . Q 3 HOH C 10 410 138 HOH HOH . Q 3 HOH C 11 411 125 HOH HOH . Q 3 HOH C 12 412 86 HOH HOH . Q 3 HOH C 13 413 87 HOH HOH . R 3 HOH D 1 401 154 HOH HOH . R 3 HOH D 2 402 72 HOH HOH . R 3 HOH D 3 403 107 HOH HOH . R 3 HOH D 4 404 68 HOH HOH . R 3 HOH D 5 405 92 HOH HOH . R 3 HOH D 6 406 83 HOH HOH . S 3 HOH E 1 501 16 HOH HOH . S 3 HOH E 2 502 44 HOH HOH . S 3 HOH E 3 503 22 HOH HOH . S 3 HOH E 4 504 23 HOH HOH . S 3 HOH E 5 505 58 HOH HOH . S 3 HOH E 6 506 144 HOH HOH . S 3 HOH E 7 507 105 HOH HOH . S 3 HOH E 8 508 2 HOH HOH . S 3 HOH E 9 509 54 HOH HOH . S 3 HOH E 10 510 66 HOH HOH . S 3 HOH E 11 511 135 HOH HOH . S 3 HOH E 12 512 51 HOH HOH . S 3 HOH E 13 513 143 HOH HOH . S 3 HOH E 14 514 169 HOH HOH . S 3 HOH E 15 515 82 HOH HOH . S 3 HOH E 16 516 165 HOH HOH . S 3 HOH E 17 517 152 HOH HOH . S 3 HOH E 18 518 73 HOH HOH . S 3 HOH E 19 519 109 HOH HOH . S 3 HOH E 20 520 90 HOH HOH . T 3 HOH F 1 401 38 HOH HOH . T 3 HOH F 2 402 129 HOH HOH . T 3 HOH F 3 403 11 HOH HOH . T 3 HOH F 4 404 27 HOH HOH . T 3 HOH F 5 405 164 HOH HOH . T 3 HOH F 6 406 77 HOH HOH . T 3 HOH F 7 407 76 HOH HOH . T 3 HOH F 8 408 42 HOH HOH . T 3 HOH F 9 409 34 HOH HOH . T 3 HOH F 10 410 108 HOH HOH . T 3 HOH F 11 411 146 HOH HOH . T 3 HOH F 12 412 126 HOH HOH . T 3 HOH F 13 413 137 HOH HOH . T 3 HOH F 14 414 96 HOH HOH . T 3 HOH F 15 415 162 HOH HOH . T 3 HOH F 16 416 41 HOH HOH . T 3 HOH F 17 417 147 HOH HOH . U 3 HOH G 1 401 98 HOH HOH . U 3 HOH G 2 402 160 HOH HOH . U 3 HOH G 3 403 81 HOH HOH . U 3 HOH G 4 404 93 HOH HOH . U 3 HOH G 5 405 33 HOH HOH . U 3 HOH G 6 406 49 HOH HOH . U 3 HOH G 7 407 64 HOH HOH . U 3 HOH G 8 408 75 HOH HOH . U 3 HOH G 9 409 166 HOH HOH . U 3 HOH G 10 410 80 HOH HOH . U 3 HOH G 11 411 106 HOH HOH . U 3 HOH G 12 412 112 HOH HOH . V 3 HOH H 1 401 153 HOH HOH . V 3 HOH H 2 402 28 HOH HOH . V 3 HOH H 3 403 5 HOH HOH . V 3 HOH H 4 404 19 HOH HOH . V 3 HOH H 5 405 7 HOH HOH . W 3 HOH I 1 401 123 HOH HOH . X 3 HOH J 1 401 29 HOH HOH . X 3 HOH J 2 402 36 HOH HOH . Y 3 HOH K 1 401 94 HOH HOH . Y 3 HOH K 2 402 70 HOH HOH . Y 3 HOH K 3 403 167 HOH HOH . Y 3 HOH K 4 404 12 HOH HOH . Y 3 HOH K 5 405 9 HOH HOH . Y 3 HOH K 6 406 30 HOH HOH . Y 3 HOH K 7 407 172 HOH HOH . Y 3 HOH K 8 408 71 HOH HOH . Y 3 HOH K 9 409 124 HOH HOH . Y 3 HOH K 10 410 31 HOH HOH . Y 3 HOH K 11 411 63 HOH HOH . Y 3 HOH K 12 412 118 HOH HOH . Y 3 HOH K 13 413 104 HOH HOH . Y 3 HOH K 14 414 74 HOH HOH . Y 3 HOH K 15 415 148 HOH HOH . Z 3 HOH L 1 401 39 HOH HOH . Z 3 HOH L 2 402 103 HOH HOH . Z 3 HOH L 3 403 14 HOH HOH . Z 3 HOH L 4 404 85 HOH HOH . Z 3 HOH L 5 405 156 HOH HOH . Z 3 HOH L 6 406 45 HOH HOH . Z 3 HOH L 7 407 110 HOH HOH . Z 3 HOH L 8 408 43 HOH HOH . Z 3 HOH L 9 409 52 HOH HOH . Z 3 HOH L 10 410 113 HOH HOH . Z 3 HOH L 11 411 120 HOH HOH . Z 3 HOH L 12 412 55 HOH HOH . Z 3 HOH L 13 413 157 HOH HOH . Z 3 HOH L 14 414 3 HOH HOH . Z 3 HOH L 15 415 170 HOH HOH . Z 3 HOH L 16 416 134 HOH HOH . Z 3 HOH L 17 417 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . N 2 -1.128 21.346 52.029 1 47.27 ? C1 PEG 401 E 1 HETATM 2 O O1 PEG . . . N 2 0.259 21.097 52.12 1 46.95 ? O1 PEG 401 E 1 HETATM 3 C C2 PEG . . . N 2 -1.907 20.341 52.828 1 53.14 ? C2 PEG 401 E 1 HETATM 4 O O2 PEG . . . N 2 -1.433 20.287 54.185 1 57.29 ? O2 PEG 401 E 1 HETATM 5 C C3 PEG . . . N 2 -2.474 20.064 55.144 1 54.56 ? C3 PEG 401 E 1 HETATM 6 C C4 PEG . . . N 2 -1.959 20.156 56.556 1 50.55 ? C4 PEG 401 E 1 HETATM 7 O O4 PEG . . . N 2 -2.93 20.761 57.425 1 52.95 ? O4 PEG 401 E 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #