data_8DS0 # _model_server_result.job_id XiNDBbCz3RdotFwVDNnqGw _model_server_result.datetime_utc '2024-11-14 20:51:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ds0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8DS0 # _exptl.entry_id 8DS0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.03 _cell.angle_gamma 90 _cell.entry_id 8DS0 _cell.length_a 49.12 _cell.length_b 105.495 _cell.length_c 53.317 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DS0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 8DS0 _atom_sites.fract_transf_matrix[1][1] 0.020358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005087 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009479 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019332 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 401 1 PEG PEG . D 3 HOH A 1 501 106 HOH HOH . D 3 HOH A 2 502 57 HOH HOH . D 3 HOH A 3 503 18 HOH HOH . D 3 HOH A 4 504 55 HOH HOH . D 3 HOH A 5 505 93 HOH HOH . D 3 HOH A 6 506 6 HOH HOH . D 3 HOH A 7 507 110 HOH HOH . D 3 HOH A 8 508 27 HOH HOH . D 3 HOH A 9 509 73 HOH HOH . D 3 HOH A 10 510 112 HOH HOH . D 3 HOH A 11 511 113 HOH HOH . D 3 HOH A 12 512 51 HOH HOH . D 3 HOH A 13 513 100 HOH HOH . D 3 HOH A 14 514 101 HOH HOH . D 3 HOH A 15 515 3 HOH HOH . D 3 HOH A 16 516 88 HOH HOH . D 3 HOH A 17 517 71 HOH HOH . D 3 HOH A 18 518 2 HOH HOH . D 3 HOH A 19 519 34 HOH HOH . D 3 HOH A 20 520 35 HOH HOH . D 3 HOH A 21 521 82 HOH HOH . D 3 HOH A 22 522 8 HOH HOH . D 3 HOH A 23 523 43 HOH HOH . D 3 HOH A 24 524 38 HOH HOH . D 3 HOH A 25 525 92 HOH HOH . D 3 HOH A 26 526 105 HOH HOH . D 3 HOH A 27 527 111 HOH HOH . D 3 HOH A 28 528 1 HOH HOH . D 3 HOH A 29 529 11 HOH HOH . D 3 HOH A 30 530 17 HOH HOH . D 3 HOH A 31 531 22 HOH HOH . D 3 HOH A 32 532 30 HOH HOH . D 3 HOH A 33 533 94 HOH HOH . D 3 HOH A 34 534 7 HOH HOH . D 3 HOH A 35 535 56 HOH HOH . D 3 HOH A 36 536 107 HOH HOH . D 3 HOH A 37 537 79 HOH HOH . D 3 HOH A 38 538 36 HOH HOH . D 3 HOH A 39 539 86 HOH HOH . D 3 HOH A 40 540 15 HOH HOH . D 3 HOH A 41 541 29 HOH HOH . D 3 HOH A 42 542 12 HOH HOH . D 3 HOH A 43 543 77 HOH HOH . D 3 HOH A 44 544 53 HOH HOH . D 3 HOH A 45 545 81 HOH HOH . D 3 HOH A 46 546 44 HOH HOH . D 3 HOH A 47 547 33 HOH HOH . D 3 HOH A 48 548 95 HOH HOH . D 3 HOH A 49 549 24 HOH HOH . D 3 HOH A 50 550 91 HOH HOH . D 3 HOH A 51 551 89 HOH HOH . D 3 HOH A 52 552 58 HOH HOH . D 3 HOH A 53 553 49 HOH HOH . D 3 HOH A 54 554 74 HOH HOH . D 3 HOH A 55 555 67 HOH HOH . D 3 HOH A 56 556 62 HOH HOH . D 3 HOH A 57 557 16 HOH HOH . D 3 HOH A 58 558 32 HOH HOH . D 3 HOH A 59 559 48 HOH HOH . D 3 HOH A 60 560 114 HOH HOH . D 3 HOH A 61 561 59 HOH HOH . D 3 HOH A 62 562 65 HOH HOH . D 3 HOH A 63 563 54 HOH HOH . D 3 HOH A 64 564 61 HOH HOH . D 3 HOH A 65 565 64 HOH HOH . D 3 HOH A 66 566 90 HOH HOH . D 3 HOH A 67 567 52 HOH HOH . D 3 HOH A 68 568 75 HOH HOH . D 3 HOH A 69 569 66 HOH HOH . D 3 HOH A 70 570 41 HOH HOH . D 3 HOH A 71 571 115 HOH HOH . D 3 HOH A 72 572 46 HOH HOH . D 3 HOH A 73 573 23 HOH HOH . E 3 HOH B 1 401 76 HOH HOH . E 3 HOH B 2 402 37 HOH HOH . E 3 HOH B 3 403 20 HOH HOH . E 3 HOH B 4 404 80 HOH HOH . E 3 HOH B 5 405 47 HOH HOH . E 3 HOH B 6 406 5 HOH HOH . E 3 HOH B 7 407 39 HOH HOH . E 3 HOH B 8 408 19 HOH HOH . E 3 HOH B 9 409 69 HOH HOH . E 3 HOH B 10 410 42 HOH HOH . E 3 HOH B 11 411 13 HOH HOH . E 3 HOH B 12 412 68 HOH HOH . E 3 HOH B 13 413 50 HOH HOH . E 3 HOH B 14 414 26 HOH HOH . E 3 HOH B 15 415 40 HOH HOH . E 3 HOH B 16 416 9 HOH HOH . E 3 HOH B 17 417 10 HOH HOH . E 3 HOH B 18 418 31 HOH HOH . E 3 HOH B 19 419 83 HOH HOH . E 3 HOH B 20 420 45 HOH HOH . E 3 HOH B 21 421 84 HOH HOH . E 3 HOH B 22 422 14 HOH HOH . E 3 HOH B 23 423 109 HOH HOH . E 3 HOH B 24 424 72 HOH HOH . E 3 HOH B 25 425 97 HOH HOH . E 3 HOH B 26 426 21 HOH HOH . E 3 HOH B 27 427 85 HOH HOH . E 3 HOH B 28 428 60 HOH HOH . E 3 HOH B 29 429 63 HOH HOH . E 3 HOH B 30 430 25 HOH HOH . E 3 HOH B 31 431 98 HOH HOH . E 3 HOH B 32 432 28 HOH HOH . E 3 HOH B 33 433 4 HOH HOH . E 3 HOH B 34 434 70 HOH HOH . E 3 HOH B 35 435 96 HOH HOH . E 3 HOH B 36 436 103 HOH HOH . E 3 HOH B 37 437 108 HOH HOH . E 3 HOH B 38 438 78 HOH HOH . E 3 HOH B 39 439 104 HOH HOH . E 3 HOH B 40 440 87 HOH HOH . E 3 HOH B 41 441 99 HOH HOH . E 3 HOH B 42 442 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . C 2 -9.815 65.553 21.841 1 67.52 ? C1 PEG 401 A 1 HETATM 2 O O1 PEG . . . C 2 -8.738 66.494 21.837 1 62.06 ? O1 PEG 401 A 1 HETATM 3 C C2 PEG . . . C 2 -9.341 64.133 22.057 1 66.09 ? C2 PEG 401 A 1 HETATM 4 O O2 PEG . . . C 2 -10.338 63.206 21.626 1 67.85 ? O2 PEG 401 A 1 HETATM 5 C C3 PEG . . . C 2 -10.024 62.55 20.398 1 60.01 ? C3 PEG 401 A 1 HETATM 6 C C4 PEG . . . C 2 -11.046 61.493 20.091 1 56.92 ? C4 PEG 401 A 1 HETATM 7 O O4 PEG . . . C 2 -11.771 61.789 18.899 1 52.66 ? O4 PEG 401 A 1 HETATM 8 H H11 PEG . . . C 2 -10.274 65.601 20.988 1 81.02 ? H11 PEG 401 A 1 HETATM 9 H H12 PEG . . . C 2 -10.43 65.787 22.553 1 81.02 ? H12 PEG 401 A 1 HETATM 10 H HO1 PEG . . . C 2 -8.941 67.254 21.513 1 74.47 ? HO1 PEG 401 A 1 HETATM 11 H H21 PEG . . . C 2 -9.162 63.996 23.001 1 79.31 ? H21 PEG 401 A 1 HETATM 12 H H22 PEG . . . C 2 -8.527 63.987 21.55 1 79.31 ? H22 PEG 401 A 1 HETATM 13 H H31 PEG . . . C 2 -9.149 62.137 20.471 1 72.01 ? H31 PEG 401 A 1 HETATM 14 H H32 PEG . . . C 2 -10.015 63.203 19.681 1 72.01 ? H32 PEG 401 A 1 HETATM 15 H H41 PEG . . . C 2 -11.67 61.434 20.832 1 68.3 ? H41 PEG 401 A 1 HETATM 16 H H42 PEG . . . C 2 -10.595 60.641 19.982 1 68.3 ? H42 PEG 401 A 1 HETATM 17 H HO4 PEG . . . C 2 -12.343 61.197 18.687 1 63.2 ? HO4 PEG 401 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 360 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #