data_8DSA
#
_model_server_result.job_id            vlvVxhs0uEeQ2eK6X6JpfQ 
_model_server_result.datetime_utc      '2024-12-27 01:30:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8dsa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":902}' 
#
_entry.id    8DSA 
#
_exptl.entry_id    8DSA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8DSA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DSA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 54 1_555 A SG CYS 402 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf2 A SG CYS 57 A CYS 57 1_555 A SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 205 A CYS 113 1_555 A SG CYS 387 A CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 54 B CYS 54 1_555 B SG CYS 402 B CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf5 B SG CYS 57 B CYS 57 1_555 B SG CYS 65 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf6 B SG CYS 205 B CYS 113 1_555 B SG CYS 387 B CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 C SG CYS 54 C CYS 54 1_555 C SG CYS 402 C CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf8 C SG CYS 57 C CYS 57 1_555 C SG CYS 65 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf9 C SG CYS 205 C CYS 113 1_555 C SG CYS 387 C CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 D SG CYS 54 D CYS 54 1_555 D SG CYS 402 D CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf11 D SG CYS 57 D CYS 57 1_555 D SG CYS 65 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf12 D SG CYS 205 D CYS 113 1_555 D SG CYS 387 D CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf13 E SG CYS 54 E CYS 54 1_555 E SG CYS 402 E CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf14 E SG CYS 57 E CYS 57 1_555 E SG CYS 65 E CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf15 E SG CYS 205 E CYS 113 1_555 E SG CYS 387 E CYS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf16 F SG CYS 54 F CYS 54 1_555 F SG CYS 308 F CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf17 F SG CYS 115 F CYS 115 1_555 F SG CYS 293 F CYS 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     8DSA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 PEE C 1 901 902 PEE PEE . 
H 3 PEE C 1 902 903 PEE PEE . 
I 3 PEE D 1 901 901 PEE PEE . 
J 3 PEE D 1 902 902 PEE PEE . 
K 4 HOH A 1 901 5 HOH HOH . 
L 4 HOH B 1 901 4 HOH HOH . 
M 4 HOH C 1 1001 3 HOH HOH . 
N 4 HOH D 1 1001 2 HOH HOH . 
O 4 HOH E 1 901 1 HOH HOH . 
P 4 HOH F 1 901 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C27 PEE . . . J 3 217.468 207.497 236.214 1 51.03 ? C27 PEE 902 D 1 
HETATM 2 C C26 PEE . . . J 3 218.174 208.498 237.111 1 51.03 ? C26 PEE 902 D 1 
HETATM 3 C C25 PEE . . . J 3 217.908 208.196 238.584 1 51.03 ? C25 PEE 902 D 1 
HETATM 4 C C24 PEE . . . J 3 218.976 208.827 239.474 1 51.03 ? C24 PEE 902 D 1 
HETATM 5 C C23 PEE . . . J 3 219.183 208.068 240.79 1 51.03 ? C23 PEE 902 D 1 
HETATM 6 C C22 PEE . . . J 3 219.103 209.046 241.955 1 51.03 ? C22 PEE 902 D 1 
HETATM 7 C C21 PEE . . . J 3 219.65 208.533 243.282 1 51.03 ? C21 PEE 902 D 1 
HETATM 8 C C20 PEE . . . J 3 220.187 209.624 244.201 1 51.03 ? C20 PEE 902 D 1 
HETATM 9 C C19 PEE . . . J 3 219.257 210.838 244.279 1 51.03 ? C19 PEE 902 D 1 
HETATM 10 C C18 PEE . . . J 3 220.017 212.106 244.655 1 51.03 ? C18 PEE 902 D 1 
HETATM 11 C C17 PEE . . . J 3 219.219 213.025 245.581 1 51.03 ? C17 PEE 902 D 1 
HETATM 12 C C16 PEE . . . J 3 218.081 213.684 244.792 1 51.03 ? C16 PEE 902 D 1 
HETATM 13 C C15 PEE . . . J 3 217.043 214.355 245.69 1 51.03 ? C15 PEE 902 D 1 
HETATM 14 C C14 PEE . . . J 3 216.011 213.346 246.215 1 51.03 ? C14 PEE 902 D 1 
HETATM 15 C C13 PEE . . . J 3 216.148 213.071 247.713 1 51.03 ? C13 PEE 902 D 1 
HETATM 16 C C12 PEE . . . J 3 215.383 214.102 248.562 1 51.03 ? C12 PEE 902 D 1 
HETATM 17 C C11 PEE . . . J 3 216.328 215.111 249.243 1 51.03 ? C11 PEE 902 D 1 
HETATM 18 C C10 PEE . . . J 3 216.859 214.549 250.541 1 51.03 ? C10 PEE 902 D 1 
HETATM 19 O O4 PEE . . . J 3 217.127 213.38 250.734 1 51.03 ? O4 PEE 902 D 1 
HETATM 20 O O2 PEE . . . J 3 217.058 215.463 251.525 1 51.03 ? O2 PEE 902 D 1 
HETATM 21 C C2 PEE . . . J 3 215.945 216.154 252.052 1 51.03 ? C2 PEE 902 D 1 
HETATM 22 C C1 PEE . . . J 3 215.9 215.773 253.56 1 51.03 ? C1 PEE 902 D 1 
HETATM 23 O O3P PEE . . . J 3 217.219 215.687 253.981 1 51.03 ? O3P PEE 902 D 1 
HETATM 24 P P PEE . . . J 3 217.719 215.81 255.56 1 51.03 ? P PEE 902 D 1 
HETATM 25 O O2P PEE . . . J 3 216.585 216.306 256.396 1 51.03 ? O2P PEE 902 D 1 
HETATM 26 O O1P PEE . . . J 3 219.177 216.073 255.567 1 51.03 ? O1P PEE 902 D 1 
HETATM 27 O O4P PEE . . . J 3 217.63 214.046 255.752 1 51.03 ? O4P PEE 902 D 1 
HETATM 28 C C4 PEE . . . J 3 217.451 213.532 257.002 1 51.03 ? C4 PEE 902 D 1 
HETATM 29 C C5 PEE . . . J 3 218.868 213.27 257.597 1 51.03 ? C5 PEE 902 D 1 
HETATM 30 N N PEE . . . J 3 219.005 211.769 257.831 1 51.03 ? N PEE 902 D 1 
HETATM 31 C C3 PEE . . . J 3 216.21 217.664 251.89 1 51.03 ? C3 PEE 902 D 1 
HETATM 32 O O3 PEE . . . J 3 214.995 218.38 252.005 1 51.03 ? O3 PEE 902 D 1 
HETATM 33 C C30 PEE . . . J 3 214.288 218.704 250.891 1 51.03 ? C30 PEE 902 D 1 
HETATM 34 O O5 PEE . . . J 3 213.115 218.384 250.795 1 51.03 ? O5 PEE 902 D 1 
HETATM 35 C C31 PEE . . . J 3 215.092 219.462 249.863 1 51.03 ? C31 PEE 902 D 1 
HETATM 36 C C32 PEE . . . J 3 214.271 219.616 248.577 1 51.03 ? C32 PEE 902 D 1 
HETATM 37 C C33 PEE . . . J 3 215.098 220.046 247.364 1 51.03 ? C33 PEE 902 D 1 
HETATM 38 C C34 PEE . . . J 3 215.751 218.858 246.639 1 51.03 ? C34 PEE 902 D 1 
HETATM 39 C C35 PEE . . . J 3 216.27 219.194 245.239 1 51.03 ? C35 PEE 902 D 1 
HETATM 40 C C36 PEE . . . J 3 216.995 218.008 244.579 1 51.03 ? C36 PEE 902 D 1 
HETATM 41 C C37 PEE . . . J 3 218.215 218.417 243.727 1 51.03 ? C37 PEE 902 D 1 
HETATM 42 C C38 PEE . . . J 3 218.924 219.672 244.259 1 51.03 ? C38 PEE 902 D 1 
HETATM 43 C C39 PEE . . . J 3 219.871 220.334 243.242 1 51.03 ? C39 PEE 902 D 1 
HETATM 44 C C40 PEE . . . J 3 220.583 219.331 242.318 1 51.03 ? C40 PEE 902 D 1 
HETATM 45 C C41 PEE . . . J 3 222.053 219.664 242.035 1 51.03 ? C41 PEE 902 D 1 
HETATM 46 C C42 PEE . . . J 3 222.513 219.16 240.657 1 51.03 ? C42 PEE 902 D 1 
HETATM 47 C C43 PEE . . . J 3 223.808 218.351 240.721 1 51.03 ? C43 PEE 902 D 1 
HETATM 48 C C44 PEE . . . J 3 224.469 218.114 239.36 1 51.03 ? C44 PEE 902 D 1 
HETATM 49 C C45 PEE . . . J 3 225.985 218.305 239.324 1 51.03 ? C45 PEE 902 D 1 
HETATM 50 C C46 PEE . . . J 3 226.438 219.494 240.162 1 51.03 ? C46 PEE 902 D 1 
HETATM 51 C C47 PEE . . . J 3 227.841 219.297 240.694 1 51.03 ? C47 PEE 902 D 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           51 
#