data_8DSO # _model_server_result.job_id VVcL2LVBexI1bs9v-gZOqQ _model_server_result.datetime_utc '2024-11-08 03:04:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dso # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 8DSO # _exptl.entry_id 8DSO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8DSO _cell.length_a 104.36 _cell.length_b 104.36 _cell.length_c 110.29 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DSO _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 99 B CYS 481 1_555 C C52 TOO . B TOO 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.779 ? metalc ? metalc1 B SG CYS 53 D CYS 306 1_555 D ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc2 B SG CYS 56 D CYS 309 1_555 D ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc3 B NE2 HIS 73 D HIS 326 1_555 D ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc4 B SG CYS 80 D CYS 333 1_555 D ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8DSO _atom_sites.fract_transf_matrix[1][1] 0.009582 _atom_sites.fract_transf_matrix[1][2] 0.005532 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011065 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TOO B 1 701 701 TOO PFE . D 4 ZN D 1 401 407 ZN ZN . E 5 HOH B 1 801 262 HOH HOH . E 5 HOH B 2 802 234 HOH HOH . E 5 HOH B 3 803 209 HOH HOH . E 5 HOH B 4 804 255 HOH HOH . E 5 HOH B 5 805 207 HOH HOH . E 5 HOH B 6 806 303 HOH HOH . E 5 HOH B 7 807 323 HOH HOH . E 5 HOH B 8 808 302 HOH HOH . E 5 HOH B 9 809 229 HOH HOH . E 5 HOH B 10 810 297 HOH HOH . E 5 HOH B 11 811 291 HOH HOH . E 5 HOH B 12 812 256 HOH HOH . E 5 HOH B 13 813 326 HOH HOH . E 5 HOH B 14 814 265 HOH HOH . E 5 HOH B 15 815 269 HOH HOH . E 5 HOH B 16 816 288 HOH HOH . E 5 HOH B 17 817 244 HOH HOH . E 5 HOH B 18 818 194 HOH HOH . E 5 HOH B 19 819 295 HOH HOH . E 5 HOH B 20 820 301 HOH HOH . E 5 HOH B 21 821 307 HOH HOH . E 5 HOH B 22 822 24 HOH HOH . E 5 HOH B 23 823 286 HOH HOH . E 5 HOH B 24 824 223 HOH HOH . E 5 HOH B 25 825 238 HOH HOH . E 5 HOH B 26 826 235 HOH HOH . E 5 HOH B 27 827 228 HOH HOH . E 5 HOH B 28 828 251 HOH HOH . E 5 HOH B 29 829 204 HOH HOH . E 5 HOH B 30 830 212 HOH HOH . E 5 HOH B 31 831 298 HOH HOH . E 5 HOH B 32 832 268 HOH HOH . E 5 HOH B 33 833 287 HOH HOH . E 5 HOH B 34 834 275 HOH HOH . E 5 HOH B 35 835 305 HOH HOH . E 5 HOH B 36 836 294 HOH HOH . E 5 HOH B 37 837 254 HOH HOH . E 5 HOH B 38 838 292 HOH HOH . E 5 HOH B 39 839 324 HOH HOH . E 5 HOH B 40 840 225 HOH HOH . E 5 HOH B 41 841 267 HOH HOH . E 5 HOH B 42 842 285 HOH HOH . E 5 HOH B 43 843 296 HOH HOH . E 5 HOH B 44 844 290 HOH HOH . E 5 HOH B 45 845 217 HOH HOH . E 5 HOH B 46 846 112 HOH HOH . E 5 HOH B 47 847 245 HOH HOH . E 5 HOH B 48 848 277 HOH HOH . E 5 HOH B 49 849 283 HOH HOH . F 5 HOH D 1 501 272 HOH HOH . F 5 HOH D 2 502 240 HOH HOH . F 5 HOH D 3 503 216 HOH HOH . F 5 HOH D 4 504 205 HOH HOH . F 5 HOH D 5 505 289 HOH HOH . F 5 HOH D 6 506 315 HOH HOH . F 5 HOH D 7 507 273 HOH HOH . F 5 HOH D 8 508 306 HOH HOH . F 5 HOH D 9 509 226 HOH HOH . F 5 HOH D 10 510 202 HOH HOH . F 5 HOH D 11 511 253 HOH HOH . F 5 HOH D 12 512 299 HOH HOH . F 5 HOH D 13 513 293 HOH HOH . F 5 HOH D 14 514 242 HOH HOH . F 5 HOH D 15 515 170 HOH HOH . F 5 HOH D 16 516 249 HOH HOH . F 5 HOH D 17 517 300 HOH HOH . F 5 HOH D 18 518 278 HOH HOH . F 5 HOH D 19 519 201 HOH HOH . F 5 HOH D 20 520 284 HOH HOH . F 5 HOH D 21 521 271 HOH HOH . F 5 HOH D 22 522 200 HOH HOH . F 5 HOH D 23 523 279 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -54.453 _atom_site.Cartn_y 8.187 _atom_site.Cartn_z 9.467 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 66.36 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #