data_8DU3
#
_model_server_result.job_id            Oi8C1JLJSArWbMsyXGJLRA 
_model_server_result.datetime_utc      '2024-11-07 12:39:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8du3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":3020}' 
#
_entry.id    8DU3 
#
_exptl.entry_id    8DU3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.461 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OLEIC ACID' 
_entity.pdbx_number_of_molecules    17 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8DU3 
_cell.length_a            39.6 
_cell.length_b            179.8 
_cell.length_c            141 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DU3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 M N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
? 5 Q N N 
? 5 R N N 
? 5 S N N 
? 5 T N N 
? 5 U N N 
? 5 V N N 
? 5 W N N 
? 5 X N N 
? 5 Y N N 
? 5 Z N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C18 H34 O2' 
_chem_comp.formula_weight    282.461 
_chem_comp.id                OLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OLEIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 OLA doub 314 n n 
C1 O2 OLA sing 315 n n 
C1 C2 OLA sing 316 n n 
O2 HO2 OLA sing 317 n n 
C2 C3 OLA sing 318 n n 
C2 H21 OLA sing 319 n n 
C2 H22 OLA sing 320 n n 
C3 C4 OLA sing 321 n n 
C3 H31 OLA sing 322 n n 
C3 H32 OLA sing 323 n n 
C4 C5 OLA sing 324 n n 
C4 H41 OLA sing 325 n n 
C4 H42 OLA sing 326 n n 
C5 C6 OLA sing 327 n n 
C5 H51 OLA sing 328 n n 
C5 H52 OLA sing 329 n n 
C6 C7 OLA sing 330 n n 
C6 H61 OLA sing 331 n n 
C6 H62 OLA sing 332 n n 
C7 C8 OLA sing 333 n n 
C7 H71 OLA sing 334 n n 
C7 H72 OLA sing 335 n n 
C8 C9 OLA sing 336 n n 
C8 H81 OLA sing 337 n n 
C8 H82 OLA sing 338 n n 
C9 C10 OLA doub 339 z n 
C9 H9 OLA sing 340 n n 
C10 C11 OLA sing 341 n n 
C10 H10 OLA sing 342 n n 
C11 C12 OLA sing 343 n n 
C11 H111 OLA sing 344 n n 
C11 H112 OLA sing 345 n n 
C12 C13 OLA sing 346 n n 
C12 H121 OLA sing 347 n n 
C12 H122 OLA sing 348 n n 
C13 C14 OLA sing 349 n n 
C13 H131 OLA sing 350 n n 
C13 H132 OLA sing 351 n n 
C14 C15 OLA sing 352 n n 
C14 H141 OLA sing 353 n n 
C14 H142 OLA sing 354 n n 
C15 C16 OLA sing 355 n n 
C15 H151 OLA sing 356 n n 
C15 H152 OLA sing 357 n n 
C16 C17 OLA sing 358 n n 
C16 H161 OLA sing 359 n n 
C16 H162 OLA sing 360 n n 
C17 C18 OLA sing 361 n n 
C17 H171 OLA sing 362 n n 
C17 H172 OLA sing 363 n n 
C18 H181 OLA sing 364 n n 
C18 H182 OLA sing 365 n n 
C18 H183 OLA sing 366 n n 
#
_atom_sites.entry_id                     8DU3 
_atom_sites.fract_transf_matrix[1][1]    0.025253 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005562 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007092 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TKO A 1 3001 3001 TKO XXX . 
C 3 CLR A 1 3002 3002 CLR CLR . 
D 3 CLR A 1 3003 3003 CLR CLR . 
E 3 CLR A 1 3004 3004 CLR CLR . 
F 4 OLC A 1 3005 3005 OLC OLC . 
G 4 OLC A 1 3006 3006 OLC OLC . 
H 4 OLC A 1 3007 3007 OLC OLC . 
I 4 OLC A 1 3008 3008 OLC OLC . 
J 5 OLA A 1 3009 3011 OLA OLA . 
K 5 OLA A 1 3010 3012 OLA OLA . 
L 5 OLA A 1 3011 3014 OLA OLA . 
M 5 OLA A 1 3012 3015 OLA OLA . 
N 5 OLA A 1 3013 3016 OLA OLA . 
O 5 OLA A 1 3014 3018 OLA OLA . 
P 5 OLA A 1 3015 3019 OLA OLA . 
Q 5 OLA A 1 3016 3021 OLA OLA . 
R 5 OLA A 1 3017 3022 OLA OLA . 
S 5 OLA A 1 3018 3023 OLA OLA . 
T 5 OLA A 1 3019 3026 OLA OLA . 
U 5 OLA A 1 3020 3027 OLA OLA . 
V 5 OLA A 1 3021 3028 OLA OLA . 
W 5 OLA A 1 3022 3030 OLA OLA . 
X 5 OLA A 1 3023 3031 OLA OLA . 
Y 5 OLA A 1 3024 3032 OLA OLA . 
Z 5 OLA A 1 3025 3033 OLA OLA . 
AA 6 HOH A 1 3101 37 HOH HOH . 
AA 6 HOH A 2 3102 43 HOH HOH . 
AA 6 HOH A 3 3103 39 HOH HOH . 
AA 6 HOH A 4 3104 38 HOH HOH . 
AA 6 HOH A 5 3105 8 HOH HOH . 
AA 6 HOH A 6 3106 14 HOH HOH . 
AA 6 HOH A 7 3107 4 HOH HOH . 
AA 6 HOH A 8 3108 40 HOH HOH . 
AA 6 HOH A 9 3109 52 HOH HOH . 
AA 6 HOH A 10 3110 45 HOH HOH . 
AA 6 HOH A 11 3111 50 HOH HOH . 
AA 6 HOH A 12 3112 36 HOH HOH . 
AA 6 HOH A 13 3113 48 HOH HOH . 
AA 6 HOH A 14 3114 3 HOH HOH . 
AA 6 HOH A 15 3115 1 HOH HOH . 
AA 6 HOH A 16 3116 11 HOH HOH . 
AA 6 HOH A 17 3117 41 HOH HOH . 
AA 6 HOH A 18 3118 49 HOH HOH . 
AA 6 HOH A 19 3119 47 HOH HOH . 
AA 6 HOH A 20 3120 27 HOH HOH . 
AA 6 HOH A 21 3121 28 HOH HOH . 
AA 6 HOH A 22 3122 7 HOH HOH . 
AA 6 HOH A 23 3123 16 HOH HOH . 
AA 6 HOH A 24 3124 24 HOH HOH . 
AA 6 HOH A 25 3125 42 HOH HOH . 
AA 6 HOH A 26 3126 5 HOH HOH . 
AA 6 HOH A 27 3127 26 HOH HOH . 
AA 6 HOH A 28 3128 17 HOH HOH . 
AA 6 HOH A 29 3129 9 HOH HOH . 
AA 6 HOH A 30 3130 23 HOH HOH . 
AA 6 HOH A 31 3131 34 HOH HOH . 
AA 6 HOH A 32 3132 44 HOH HOH . 
AA 6 HOH A 33 3133 2 HOH HOH . 
AA 6 HOH A 34 3134 18 HOH HOH . 
AA 6 HOH A 35 3135 13 HOH HOH . 
AA 6 HOH A 36 3136 20 HOH HOH . 
AA 6 HOH A 37 3137 33 HOH HOH . 
AA 6 HOH A 38 3138 15 HOH HOH . 
AA 6 HOH A 39 3139 25 HOH HOH . 
AA 6 HOH A 40 3140 46 HOH HOH . 
AA 6 HOH A 41 3141 19 HOH HOH . 
AA 6 HOH A 42 3142 10 HOH HOH . 
AA 6 HOH A 43 3143 54 HOH HOH . 
AA 6 HOH A 44 3144 35 HOH HOH . 
AA 6 HOH A 45 3145 29 HOH HOH . 
AA 6 HOH A 46 3146 30 HOH HOH . 
AA 6 HOH A 47 3147 21 HOH HOH . 
AA 6 HOH A 48 3148 6 HOH HOH . 
AA 6 HOH A 49 3149 32 HOH HOH . 
AA 6 HOH A 50 3150 12 HOH HOH . 
AA 6 HOH A 51 3151 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OLA . . . U 5 -31.926 7.99 36.524 1 62.89 ? C1 OLA 3020 A 1 
HETATM 2 O O1 OLA . . . U 5 -31.042 8.876 36.491 1 67.15 ? O1 OLA 3020 A 1 
HETATM 3 O O2 OLA . . . U 5 -33.129 8.336 36.551 1 60.93 ? O2 OLA 3020 A 1 
HETATM 4 C C2 OLA . . . U 5 -31.542 6.509 36.529 1 46.8 ? C2 OLA 3020 A 1 
HETATM 5 C C3 OLA . . . U 5 -32.62 5.663 37.203 1 48.1 ? C3 OLA 3020 A 1 
HETATM 6 C C4 OLA . . . U 5 -32.469 4.188 36.838 1 49.62 ? C4 OLA 3020 A 1 
HETATM 7 C C5 OLA . . . U 5 -32.088 3.341 38.051 1 42.38 ? C5 OLA 3020 A 1 
HETATM 8 C C6 OLA . . . U 5 -31.958 1.871 37.652 1 45.53 ? C6 OLA 3020 A 1 
HETATM 9 C C7 OLA . . . U 5 -31.319 1.033 38.757 1 45.32 ? C7 OLA 3020 A 1 
HETATM 10 C C8 OLA . . . U 5 -30.439 -0.055 38.165 1 49.71 ? C8 OLA 3020 A 1 
HETATM 11 C C9 OLA . . . U 5 -30.445 -1.288 39.032 1 41.17 ? C9 OLA 3020 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           353 
_model_server_stats.encode_time_ms          29 
_model_server_stats.element_count           11 
#