data_8DU9
#
_model_server_result.job_id            Fcqd4syeTIrwJi4Hc1y6qA 
_model_server_result.datetime_utc      '2024-10-19 16:32:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8du9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    8DU9 
#
_exptl.entry_id    8DU9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              482.613 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "[(1'R)-6'-hydroxy-1'-{4-[2-(piperidin-1-yl)ethoxy]phenyl}-1',4'-dihydro-2'H-spiro[cyclopropane-1,3'-isoquinolin]-2'-yl](phenyl)methanone" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103 
_cell.angle_gamma         90 
_cell.entry_id            8DU9 
_cell.length_a            102.248 
_cell.length_b            58.079 
_cell.length_c            87.57 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DU9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C31 H34 N2 O3' 
_chem_comp.formula_weight    482.613 
_chem_comp.id                TT5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "[(1'R)-6'-hydroxy-1'-{4-[2-(piperidin-1-yl)ethoxy]phenyl}-1',4'-dihydro-2'H-spiro[cyclopropane-1,3'-isoquinolin]-2'-yl](phenyl)methanone" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 C14 TT5 doub 334 n y 
C13 C12 TT5 sing 335 n y 
C14 C15 TT5 sing 336 n y 
C12 C11 TT5 doub 337 n y 
C15 C16 TT5 doub 338 n y 
C11 C16 TT5 sing 339 n y 
C11 C10 TT5 sing 340 n n 
O1 C10 TT5 doub 341 n n 
C10 N1 TT5 sing 342 n n 
C23 C8 TT5 sing 343 n n 
C23 C24 TT5 sing 344 n n 
N1 C8 TT5 sing 345 n n 
N1 C9 TT5 sing 346 n n 
C7 C8 TT5 sing 347 n n 
C7 C5 TT5 sing 348 n n 
C8 C24 TT5 sing 349 n n 
C5 C4 TT5 doub 350 n y 
C5 C6 TT5 sing 351 n y 
C4 C3 TT5 sing 352 n y 
C9 C6 TT5 sing 353 n n 
C9 C17 TT5 sing 354 n n 
C6 C1 TT5 doub 355 n y 
C3 O2 TT5 sing 356 n n 
C3 C2 TT5 doub 357 n y 
C1 C2 TT5 sing 358 n y 
C17 C18 TT5 doub 359 n y 
C17 C22 TT5 sing 360 n y 
C18 C19 TT5 sing 361 n y 
C22 C21 TT5 doub 362 n y 
C19 C20 TT5 doub 363 n y 
C21 C20 TT5 sing 364 n y 
C20 O3 TT5 sing 365 n n 
O3 C25 TT5 sing 366 n n 
C25 C26 TT5 sing 367 n n 
C26 N2 TT5 sing 368 n n 
C31 N2 TT5 sing 369 n n 
C31 C30 TT5 sing 370 n n 
N2 C27 TT5 sing 371 n n 
C27 C28 TT5 sing 372 n n 
C30 C29 TT5 sing 373 n n 
C28 C29 TT5 sing 374 n n 
C4 H1 TT5 sing 375 n n 
C7 H2 TT5 sing 376 n n 
C7 H3 TT5 sing 377 n n 
C13 H4 TT5 sing 378 n n 
C15 H5 TT5 sing 379 n n 
C21 H6 TT5 sing 380 n n 
C22 H7 TT5 sing 381 n n 
C24 H8 TT5 sing 382 n n 
C24 H9 TT5 sing 383 n n 
C26 H10 TT5 sing 384 n n 
C26 H11 TT5 sing 385 n n 
C28 H12 TT5 sing 386 n n 
C28 H13 TT5 sing 387 n n 
C1 H14 TT5 sing 388 n n 
C12 H15 TT5 sing 389 n n 
C14 H16 TT5 sing 390 n n 
C16 H17 TT5 sing 391 n n 
C18 H18 TT5 sing 392 n n 
C19 H19 TT5 sing 393 n n 
C2 H20 TT5 sing 394 n n 
C23 H21 TT5 sing 395 n n 
C23 H22 TT5 sing 396 n n 
C25 H23 TT5 sing 397 n n 
C25 H24 TT5 sing 398 n n 
C27 H25 TT5 sing 399 n n 
C27 H26 TT5 sing 400 n n 
C29 H27 TT5 sing 401 n n 
C29 H28 TT5 sing 402 n n 
C30 H29 TT5 sing 403 n n 
C30 H30 TT5 sing 404 n n 
C31 H31 TT5 sing 405 n n 
C31 H32 TT5 sing 406 n n 
C9 H33 TT5 sing 407 n n 
O2 H35 TT5 sing 408 n n 
#
_atom_sites.entry_id                     8DU9 
_atom_sites.fract_transf_matrix[1][1]    0.00978 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002258 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017218 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01172 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TT5 A 1 601 601 TT5 LIG . 
D 2 TT5 B 1 601 601 TT5 LIG . 
E 3 HOH A 1 701 27 HOH HOH . 
E 3 HOH A 2 702 80 HOH HOH . 
E 3 HOH A 3 703 3 HOH HOH . 
E 3 HOH A 4 704 45 HOH HOH . 
E 3 HOH A 5 705 18 HOH HOH . 
E 3 HOH A 6 706 33 HOH HOH . 
E 3 HOH A 7 707 43 HOH HOH . 
E 3 HOH A 8 708 12 HOH HOH . 
E 3 HOH A 9 709 28 HOH HOH . 
E 3 HOH A 10 710 22 HOH HOH . 
E 3 HOH A 11 711 40 HOH HOH . 
E 3 HOH A 12 712 32 HOH HOH . 
E 3 HOH A 13 713 53 HOH HOH . 
E 3 HOH A 14 714 39 HOH HOH . 
E 3 HOH A 15 715 58 HOH HOH . 
E 3 HOH A 16 716 14 HOH HOH . 
E 3 HOH A 17 717 46 HOH HOH . 
E 3 HOH A 18 718 7 HOH HOH . 
E 3 HOH A 19 719 23 HOH HOH . 
E 3 HOH A 20 720 8 HOH HOH . 
E 3 HOH A 21 721 10 HOH HOH . 
E 3 HOH A 22 722 41 HOH HOH . 
E 3 HOH A 23 723 52 HOH HOH . 
E 3 HOH A 24 724 37 HOH HOH . 
E 3 HOH A 25 725 62 HOH HOH . 
E 3 HOH A 26 726 49 HOH HOH . 
E 3 HOH A 27 727 51 HOH HOH . 
E 3 HOH A 28 728 73 HOH HOH . 
E 3 HOH A 29 729 35 HOH HOH . 
E 3 HOH A 30 730 17 HOH HOH . 
E 3 HOH A 31 731 15 HOH HOH . 
E 3 HOH A 32 732 90 HOH HOH . 
E 3 HOH A 33 733 87 HOH HOH . 
E 3 HOH A 34 734 85 HOH HOH . 
E 3 HOH A 35 735 36 HOH HOH . 
E 3 HOH A 36 736 64 HOH HOH . 
E 3 HOH A 37 737 70 HOH HOH . 
E 3 HOH A 38 738 66 HOH HOH . 
E 3 HOH A 39 739 47 HOH HOH . 
E 3 HOH A 40 740 67 HOH HOH . 
E 3 HOH A 41 741 83 HOH HOH . 
E 3 HOH A 42 742 78 HOH HOH . 
F 3 HOH B 1 701 13 HOH HOH . 
F 3 HOH B 2 702 5 HOH HOH . 
F 3 HOH B 3 703 24 HOH HOH . 
F 3 HOH B 4 704 74 HOH HOH . 
F 3 HOH B 5 705 29 HOH HOH . 
F 3 HOH B 6 706 19 HOH HOH . 
F 3 HOH B 7 707 68 HOH HOH . 
F 3 HOH B 8 708 65 HOH HOH . 
F 3 HOH B 9 709 2 HOH HOH . 
F 3 HOH B 10 710 20 HOH HOH . 
F 3 HOH B 11 711 82 HOH HOH . 
F 3 HOH B 12 712 16 HOH HOH . 
F 3 HOH B 13 713 76 HOH HOH . 
F 3 HOH B 14 714 44 HOH HOH . 
F 3 HOH B 15 715 77 HOH HOH . 
F 3 HOH B 16 716 11 HOH HOH . 
F 3 HOH B 17 717 42 HOH HOH . 
F 3 HOH B 18 718 25 HOH HOH . 
F 3 HOH B 19 719 86 HOH HOH . 
F 3 HOH B 20 720 75 HOH HOH . 
F 3 HOH B 21 721 89 HOH HOH . 
F 3 HOH B 22 722 26 HOH HOH . 
F 3 HOH B 23 723 48 HOH HOH . 
F 3 HOH B 24 724 55 HOH HOH . 
F 3 HOH B 25 725 1 HOH HOH . 
F 3 HOH B 26 726 60 HOH HOH . 
F 3 HOH B 27 727 34 HOH HOH . 
F 3 HOH B 28 728 56 HOH HOH . 
F 3 HOH B 29 729 61 HOH HOH . 
F 3 HOH B 30 730 93 HOH HOH . 
F 3 HOH B 31 731 57 HOH HOH . 
F 3 HOH B 32 732 63 HOH HOH . 
F 3 HOH B 33 733 91 HOH HOH . 
F 3 HOH B 34 734 21 HOH HOH . 
F 3 HOH B 35 735 84 HOH HOH . 
F 3 HOH B 36 736 54 HOH HOH . 
F 3 HOH B 37 737 69 HOH HOH . 
F 3 HOH B 38 738 72 HOH HOH . 
F 3 HOH B 39 739 88 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 TT5 . . . D 2 17.028 -18.569 25.664 1 34.54 ? N1 TT5 601 B 1 
HETATM 2 C C4 TT5 . . . D 2 13.694 -16.279 24.69 1 27.96 ? C4 TT5 601 B 1 
HETATM 3 C C5 TT5 . . . D 2 14.903 -17.135 24.916 1 31.67 ? C5 TT5 601 B 1 
HETATM 4 C C6 TT5 . . . D 2 14.852 -18.43 24.739 1 33.16 ? C6 TT5 601 B 1 
HETATM 5 C C7 TT5 . . . D 2 16.175 -16.395 25.339 1 31.93 ? C7 TT5 601 B 1 
HETATM 6 C C8 TT5 . . . D 2 17.427 -17.262 25.264 1 33.63 ? C8 TT5 601 B 1 
HETATM 7 C C10 TT5 . . . D 2 17.609 -19.199 26.845 1 42.62 ? C10 TT5 601 B 1 
HETATM 8 C C13 TT5 . . . D 2 18.947 -17.12 29.74 1 42.6 ? C13 TT5 601 B 1 
HETATM 9 C C15 TT5 . . . D 2 20.835 -18.329 28.711 1 42.28 ? C15 TT5 601 B 1 
HETATM 10 C C17 TT5 . . . D 2 16.632 -19.913 23.651 1 32.09 ? C17 TT5 601 B 1 
HETATM 11 C C20 TT5 . . . D 2 17.687 -21.062 21.32 1 32.19 ? C20 TT5 601 B 1 
HETATM 12 C C21 TT5 . . . D 2 17.399 -19.588 21.364 1 28.87 ? C21 TT5 601 B 1 
HETATM 13 C C22 TT5 . . . D 2 16.91 -19.043 22.437 1 30.49 ? C22 TT5 601 B 1 
HETATM 14 C C24 TT5 . . . D 2 18.661 -16.728 24.487 1 32.57 ? C24 TT5 601 B 1 
HETATM 15 C C26 TT5 . . . D 2 18.102 -23.494 18.632 1 35.18 ? C26 TT5 601 B 1 
HETATM 16 C C28 TT5 . . . D 2 16.528 -21.493 16.209 1 33.52 ? C28 TT5 601 B 1 
HETATM 17 C C1 TT5 . . . D 2 13.564 -19.111 24.322 1 31.07 ? C1 TT5 601 B 1 
HETATM 18 C C11 TT5 . . . D 2 18.619 -18.566 27.819 1 37.66 ? C11 TT5 601 B 1 
HETATM 19 C C12 TT5 . . . D 2 18.094 -17.771 28.695 1 37.84 ? C12 TT5 601 B 1 
HETATM 20 C C14 TT5 . . . D 2 20.217 -17.383 29.724 1 44.4 ? C14 TT5 601 B 1 
HETATM 21 C C16 TT5 . . . D 2 20.092 -18.899 27.818 1 38.03 ? C16 TT5 601 B 1 
HETATM 22 C C18 TT5 . . . D 2 16.884 -21.19 23.617 1 31.81 ? C18 TT5 601 B 1 
HETATM 23 C C19 TT5 . . . D 2 17.451 -21.809 22.361 1 31.86 ? C19 TT5 601 B 1 
HETATM 24 C C2 TT5 . . . D 2 12.516 -18.364 24.133 1 30.57 ? C2 TT5 601 B 1 
HETATM 25 C C23 TT5 . . . D 2 18.416 -16.233 25.857 1 34.15 ? C23 TT5 601 B 1 
HETATM 26 C C25 TT5 . . . D 2 17.636 -22.905 19.967 1 32.69 ? C25 TT5 601 B 1 
HETATM 27 C C27 TT5 . . . D 2 17.085 -22.011 17.545 1 35.18 ? C27 TT5 601 B 1 
HETATM 28 C C29 TT5 . . . D 2 16.165 -22.584 15.221 1 37.71 ? C29 TT5 601 B 1 
HETATM 29 C C3 TT5 . . . D 2 12.602 -16.843 24.328 1 30.15 ? C3 TT5 601 B 1 
HETATM 30 C C30 TT5 . . . D 2 16.973 -23.872 15.418 1 37.45 ? C30 TT5 601 B 1 
HETATM 31 C C31 TT5 . . . D 2 17.908 -23.7 16.614 1 36.81 ? C31 TT5 601 B 1 
HETATM 32 C C9 TT5 . . . D 2 16.057 -19.313 24.947 1 34.26 ? C9 TT5 601 B 1 
HETATM 33 N N2 TT5 . . . D 2 17.282 -23.276 17.651 1 36.19 ? N2 TT5 601 B 1 
HETATM 34 O O1 TT5 . . . D 2 17.24 -20.26 27.103 1 50.85 ? O1 TT5 601 B 1 
HETATM 35 O O2 TT5 . . . D 2 11.52 -16.026 24.138 1 29.93 ? O2 TT5 601 B 1 
HETATM 36 O O3 TT5 . . . D 2 18.201 -21.653 20.178 1 33.46 ? O3 TT5 601 B 1 
#
_model_server_stats.io_time_ms              116 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           36 
#