data_8DUI # _model_server_result.job_id Oe5ssuKFXUZi_T9OqmpQ0g _model_server_result.datetime_utc '2024-10-19 16:44:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8dui # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8DUI # _exptl.entry_id 8DUI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.549 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "[(1'R)-1'-{4-[2-(dimethylamino)ethoxy]phenyl}-6'-hydroxy-1',4'-dihydro-2'H-spiro[cyclopropane-1,3'-isoquinolin]-2'-yl](phenyl)methanone" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.77 _cell.angle_gamma 90 _cell.entry_id 8DUI _cell.length_a 102.972 _cell.length_b 57.49 _cell.length_c 87.569 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8DUI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C28 H30 N2 O3' _chem_comp.formula_weight 442.549 _chem_comp.id TVX _chem_comp.mon_nstd_flag . _chem_comp.name "[(1'R)-1'-{4-[2-(dimethylamino)ethoxy]phenyl}-6'-hydroxy-1',4'-dihydro-2'H-spiro[cyclopropane-1,3'-isoquinolin]-2'-yl](phenyl)methanone" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C13 TVX doub 334 n y C14 C15 TVX sing 335 n y C13 C12 TVX sing 336 n y C15 C16 TVX doub 337 n y C12 C11 TVX doub 338 n y C16 C11 TVX sing 339 n y C11 C10 TVX sing 340 n n O1 C10 TVX doub 341 n n C10 N1 TVX sing 342 n n C28 C8 TVX sing 343 n n C28 C27 TVX sing 344 n n N1 C8 TVX sing 345 n n N1 C9 TVX sing 346 n n C8 C7 TVX sing 347 n n C8 C27 TVX sing 348 n n C7 C5 TVX sing 349 n n C5 C4 TVX doub 350 n y C5 C6 TVX sing 351 n y C4 C3 TVX sing 352 n y C6 C9 TVX sing 353 n n C6 C1 TVX doub 354 n y C9 C17 TVX sing 355 n n C3 O2 TVX sing 356 n n C3 C2 TVX doub 357 n y C1 C2 TVX sing 358 n y C17 C22 TVX doub 359 n y C17 C18 TVX sing 360 n y C22 C21 TVX sing 361 n y C18 C19 TVX doub 362 n y C21 C20 TVX doub 363 n y C19 C20 TVX sing 364 n y C20 O3 TVX sing 365 n n O3 C23 TVX sing 366 n n C23 C24 TVX sing 367 n n C24 N2 TVX sing 368 n n C25 N2 TVX sing 369 n n N2 C26 TVX sing 370 n n C4 H1 TVX sing 371 n n C7 H2 TVX sing 372 n n C7 H3 TVX sing 373 n n C13 H4 TVX sing 374 n n C15 H5 TVX sing 375 n n C21 H6 TVX sing 376 n n C22 H7 TVX sing 377 n n C24 H8 TVX sing 378 n n C24 H9 TVX sing 379 n n C26 H10 TVX sing 380 n n C26 H11 TVX sing 381 n n C26 H12 TVX sing 382 n n C28 H13 TVX sing 383 n n C28 H14 TVX sing 384 n n C1 H15 TVX sing 385 n n C12 H16 TVX sing 386 n n C14 H17 TVX sing 387 n n C16 H18 TVX sing 388 n n C18 H19 TVX sing 389 n n C19 H20 TVX sing 390 n n C2 H21 TVX sing 391 n n C23 H22 TVX sing 392 n n C23 H23 TVX sing 393 n n C25 H24 TVX sing 394 n n C25 H25 TVX sing 395 n n C25 H26 TVX sing 396 n n C27 H27 TVX sing 397 n n C27 H28 TVX sing 398 n n C9 H29 TVX sing 399 n n O2 H31 TVX sing 400 n n # _atom_sites.entry_id 8DUI _atom_sites.fract_transf_matrix[1][1] 0.009711 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00238 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017394 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011757 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TVX A 1 601 601 TVX LIG . D 2 TVX B 1 601 601 TVX LIG . E 3 HOH A 1 701 200 HOH HOH . E 3 HOH A 2 702 114 HOH HOH . E 3 HOH A 3 703 166 HOH HOH . E 3 HOH A 4 704 29 HOH HOH . E 3 HOH A 5 705 39 HOH HOH . E 3 HOH A 6 706 139 HOH HOH . E 3 HOH A 7 707 102 HOH HOH . E 3 HOH A 8 708 150 HOH HOH . E 3 HOH A 9 709 69 HOH HOH . E 3 HOH A 10 710 84 HOH HOH . E 3 HOH A 11 711 122 HOH HOH . E 3 HOH A 12 712 27 HOH HOH . E 3 HOH A 13 713 209 HOH HOH . E 3 HOH A 14 714 20 HOH HOH . E 3 HOH A 15 715 28 HOH HOH . E 3 HOH A 16 716 104 HOH HOH . E 3 HOH A 17 717 149 HOH HOH . E 3 HOH A 18 718 98 HOH HOH . E 3 HOH A 19 719 177 HOH HOH . E 3 HOH A 20 720 30 HOH HOH . E 3 HOH A 21 721 80 HOH HOH . E 3 HOH A 22 722 90 HOH HOH . E 3 HOH A 23 723 153 HOH HOH . E 3 HOH A 24 724 61 HOH HOH . E 3 HOH A 25 725 8 HOH HOH . E 3 HOH A 26 726 93 HOH HOH . E 3 HOH A 27 727 145 HOH HOH . E 3 HOH A 28 728 36 HOH HOH . E 3 HOH A 29 729 47 HOH HOH . E 3 HOH A 30 730 53 HOH HOH . E 3 HOH A 31 731 9 HOH HOH . E 3 HOH A 32 732 78 HOH HOH . E 3 HOH A 33 733 148 HOH HOH . E 3 HOH A 34 734 24 HOH HOH . E 3 HOH A 35 735 60 HOH HOH . E 3 HOH A 36 736 6 HOH HOH . E 3 HOH A 37 737 51 HOH HOH . E 3 HOH A 38 738 72 HOH HOH . E 3 HOH A 39 739 107 HOH HOH . E 3 HOH A 40 740 7 HOH HOH . E 3 HOH A 41 741 169 HOH HOH . E 3 HOH A 42 742 142 HOH HOH . E 3 HOH A 43 743 12 HOH HOH . E 3 HOH A 44 744 88 HOH HOH . E 3 HOH A 45 745 113 HOH HOH . E 3 HOH A 46 746 101 HOH HOH . E 3 HOH A 47 747 94 HOH HOH . E 3 HOH A 48 748 92 HOH HOH . E 3 HOH A 49 749 130 HOH HOH . E 3 HOH A 50 750 22 HOH HOH . E 3 HOH A 51 751 205 HOH HOH . E 3 HOH A 52 752 40 HOH HOH . E 3 HOH A 53 753 83 HOH HOH . E 3 HOH A 54 754 3 HOH HOH . E 3 HOH A 55 755 79 HOH HOH . E 3 HOH A 56 756 10 HOH HOH . E 3 HOH A 57 757 87 HOH HOH . E 3 HOH A 58 758 204 HOH HOH . E 3 HOH A 59 759 192 HOH HOH . E 3 HOH A 60 760 180 HOH HOH . E 3 HOH A 61 761 129 HOH HOH . E 3 HOH A 62 762 133 HOH HOH . E 3 HOH A 63 763 126 HOH HOH . E 3 HOH A 64 764 34 HOH HOH . E 3 HOH A 65 765 152 HOH HOH . E 3 HOH A 66 766 123 HOH HOH . E 3 HOH A 67 767 85 HOH HOH . E 3 HOH A 68 768 32 HOH HOH . E 3 HOH A 69 769 131 HOH HOH . E 3 HOH A 70 770 171 HOH HOH . E 3 HOH A 71 771 65 HOH HOH . E 3 HOH A 72 772 23 HOH HOH . E 3 HOH A 73 773 109 HOH HOH . E 3 HOH A 74 774 68 HOH HOH . E 3 HOH A 75 775 49 HOH HOH . E 3 HOH A 76 776 138 HOH HOH . E 3 HOH A 77 777 168 HOH HOH . E 3 HOH A 78 778 164 HOH HOH . E 3 HOH A 79 779 141 HOH HOH . E 3 HOH A 80 780 119 HOH HOH . E 3 HOH A 81 781 99 HOH HOH . E 3 HOH A 82 782 212 HOH HOH . E 3 HOH A 83 783 70 HOH HOH . E 3 HOH A 84 784 155 HOH HOH . E 3 HOH A 85 785 46 HOH HOH . E 3 HOH A 86 786 106 HOH HOH . E 3 HOH A 87 787 110 HOH HOH . E 3 HOH A 88 788 134 HOH HOH . E 3 HOH A 89 789 179 HOH HOH . E 3 HOH A 90 790 162 HOH HOH . E 3 HOH A 91 791 103 HOH HOH . E 3 HOH A 92 792 137 HOH HOH . E 3 HOH A 93 793 117 HOH HOH . E 3 HOH A 94 794 135 HOH HOH . E 3 HOH A 95 795 140 HOH HOH . E 3 HOH A 96 796 208 HOH HOH . E 3 HOH A 97 797 198 HOH HOH . E 3 HOH A 98 798 132 HOH HOH . E 3 HOH A 99 799 73 HOH HOH . E 3 HOH A 100 800 144 HOH HOH . E 3 HOH A 101 801 91 HOH HOH . E 3 HOH A 102 802 207 HOH HOH . E 3 HOH A 103 803 176 HOH HOH . E 3 HOH A 104 804 21 HOH HOH . E 3 HOH A 105 805 55 HOH HOH . E 3 HOH A 106 806 190 HOH HOH . E 3 HOH A 107 807 206 HOH HOH . E 3 HOH A 108 808 96 HOH HOH . E 3 HOH A 109 809 195 HOH HOH . F 3 HOH B 1 701 125 HOH HOH . F 3 HOH B 2 702 81 HOH HOH . F 3 HOH B 3 703 54 HOH HOH . F 3 HOH B 4 704 118 HOH HOH . F 3 HOH B 5 705 111 HOH HOH . F 3 HOH B 6 706 194 HOH HOH . F 3 HOH B 7 707 196 HOH HOH . F 3 HOH B 8 708 86 HOH HOH . F 3 HOH B 9 709 116 HOH HOH . F 3 HOH B 10 710 199 HOH HOH . F 3 HOH B 11 711 160 HOH HOH . F 3 HOH B 12 712 42 HOH HOH . F 3 HOH B 13 713 71 HOH HOH . F 3 HOH B 14 714 35 HOH HOH . F 3 HOH B 15 715 5 HOH HOH . F 3 HOH B 16 716 19 HOH HOH . F 3 HOH B 17 717 31 HOH HOH . F 3 HOH B 18 718 154 HOH HOH . F 3 HOH B 19 719 15 HOH HOH . F 3 HOH B 20 720 13 HOH HOH . F 3 HOH B 21 721 16 HOH HOH . F 3 HOH B 22 722 50 HOH HOH . F 3 HOH B 23 723 33 HOH HOH . F 3 HOH B 24 724 67 HOH HOH . F 3 HOH B 25 725 183 HOH HOH . F 3 HOH B 26 726 25 HOH HOH . F 3 HOH B 27 727 203 HOH HOH . F 3 HOH B 28 728 165 HOH HOH . F 3 HOH B 29 729 57 HOH HOH . F 3 HOH B 30 730 14 HOH HOH . F 3 HOH B 31 731 45 HOH HOH . F 3 HOH B 32 732 172 HOH HOH . F 3 HOH B 33 733 211 HOH HOH . F 3 HOH B 34 734 136 HOH HOH . F 3 HOH B 35 735 184 HOH HOH . F 3 HOH B 36 736 178 HOH HOH . F 3 HOH B 37 737 59 HOH HOH . F 3 HOH B 38 738 26 HOH HOH . F 3 HOH B 39 739 64 HOH HOH . F 3 HOH B 40 740 174 HOH HOH . F 3 HOH B 41 741 58 HOH HOH . F 3 HOH B 42 742 75 HOH HOH . F 3 HOH B 43 743 127 HOH HOH . F 3 HOH B 44 744 38 HOH HOH . F 3 HOH B 45 745 4 HOH HOH . F 3 HOH B 46 746 115 HOH HOH . F 3 HOH B 47 747 17 HOH HOH . F 3 HOH B 48 748 143 HOH HOH . F 3 HOH B 49 749 186 HOH HOH . F 3 HOH B 50 750 37 HOH HOH . F 3 HOH B 51 751 43 HOH HOH . F 3 HOH B 52 752 63 HOH HOH . F 3 HOH B 53 753 193 HOH HOH . F 3 HOH B 54 754 11 HOH HOH . F 3 HOH B 55 755 41 HOH HOH . F 3 HOH B 56 756 210 HOH HOH . F 3 HOH B 57 757 48 HOH HOH . F 3 HOH B 58 758 121 HOH HOH . F 3 HOH B 59 759 128 HOH HOH . F 3 HOH B 60 760 52 HOH HOH . F 3 HOH B 61 761 2 HOH HOH . F 3 HOH B 62 762 124 HOH HOH . F 3 HOH B 63 763 82 HOH HOH . F 3 HOH B 64 764 173 HOH HOH . F 3 HOH B 65 765 44 HOH HOH . F 3 HOH B 66 766 159 HOH HOH . F 3 HOH B 67 767 146 HOH HOH . F 3 HOH B 68 768 62 HOH HOH . F 3 HOH B 69 769 158 HOH HOH . F 3 HOH B 70 770 1 HOH HOH . F 3 HOH B 71 771 66 HOH HOH . F 3 HOH B 72 772 74 HOH HOH . F 3 HOH B 73 773 77 HOH HOH . F 3 HOH B 74 774 197 HOH HOH . F 3 HOH B 75 775 187 HOH HOH . F 3 HOH B 76 776 188 HOH HOH . F 3 HOH B 77 777 185 HOH HOH . F 3 HOH B 78 778 100 HOH HOH . F 3 HOH B 79 779 97 HOH HOH . F 3 HOH B 80 780 201 HOH HOH . F 3 HOH B 81 781 182 HOH HOH . F 3 HOH B 82 782 213 HOH HOH . F 3 HOH B 83 783 89 HOH HOH . F 3 HOH B 84 784 156 HOH HOH . F 3 HOH B 85 785 56 HOH HOH . F 3 HOH B 86 786 170 HOH HOH . F 3 HOH B 87 787 95 HOH HOH . F 3 HOH B 88 788 163 HOH HOH . F 3 HOH B 89 789 105 HOH HOH . F 3 HOH B 90 790 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 TVX . . . C 2 43.163 -5.049 15.349 1 26.54 ? N1 TVX 601 A 1 HETATM 2 C C4 TVX . . . C 2 43.044 -0.757 15.851 1 20.34 ? C4 TVX 601 A 1 HETATM 3 C C5 TVX . . . C 2 43.057 -2.294 15.82 1 23.71 ? C5 TVX 601 A 1 HETATM 4 C C6 TVX . . . C 2 44.132 -2.937 16.095 1 21.7 ? C6 TVX 601 A 1 HETATM 5 C C7 TVX . . . C 2 41.777 -2.973 15.444 1 26.42 ? C7 TVX 601 A 1 HETATM 6 C C8 TVX . . . C 2 41.767 -4.529 15.389 1 25.1 ? C8 TVX 601 A 1 HETATM 7 C C10 TVX . . . C 2 43.441 -6.206 14.513 1 36.64 ? C10 TVX 601 A 1 HETATM 8 C C13 TVX . . . C 2 41.121 -6.304 11.534 1 34.15 ? C13 TVX 601 A 1 HETATM 9 C C15 TVX . . . C 2 41.029 -8.506 12.596 1 42.68 ? C15 TVX 601 A 1 HETATM 10 C C17 TVX . . . C 2 44.332 -4.917 17.537 1 24.39 ? C17 TVX 601 A 1 HETATM 11 C C20 TVX . . . C 2 44.611 -5.813 20.205 1 28.84 ? C20 TVX 601 A 1 HETATM 12 C C21 TVX . . . C 2 45.481 -6.373 19.099 1 27.98 ? C21 TVX 601 A 1 HETATM 13 C C22 TVX . . . C 2 45.365 -5.952 17.861 1 25.74 ? C22 TVX 601 A 1 HETATM 14 C C24 TVX . . . C 2 45.878 -7.081 23.404 1 38.35 ? C24 TVX 601 A 1 HETATM 15 C C26 TVX . . . C 2 46.889 -6.274 25.375 1 43.71 ? C26 TVX 601 A 1 HETATM 16 C C28 TVX . . . C 2 40.364 -5.066 15.021 1 28.5 ? C28 TVX 601 A 1 HETATM 17 C C1 TVX . . . C 2 45.381 -2.128 16.447 1 23.33 ? C1 TVX 601 A 1 HETATM 18 C C11 TVX . . . C 2 42.412 -6.79 13.567 1 34.52 ? C11 TVX 601 A 1 HETATM 19 C C12 TVX . . . C 2 42.079 -5.934 12.631 1 37.32 ? C12 TVX 601 A 1 HETATM 20 C C14 TVX . . . C 2 40.628 -7.501 11.531 1 43.98 ? C14 TVX 601 A 1 HETATM 21 C C16 TVX . . . C 2 41.877 -8.194 13.545 1 41.41 ? C16 TVX 601 A 1 HETATM 22 C C18 TVX . . . C 2 43.574 -4.431 18.485 1 23.79 ? C18 TVX 601 A 1 HETATM 23 C C19 TVX . . . C 2 43.723 -4.914 19.907 1 23.57 ? C19 TVX 601 A 1 HETATM 24 C C2 TVX . . . C 2 45.371 -0.837 16.48 1 19.36 ? C2 TVX 601 A 1 HETATM 25 C C23 TVX . . . C 2 45.863 -6.934 21.878 1 36.15 ? C23 TVX 601 A 1 HETATM 26 C C25 TVX . . . C 2 45.793 -4.838 23.869 1 33.5 ? C25 TVX 601 A 1 HETATM 27 C C27 TVX . . . C 2 40.751 -5.063 16.432 1 28.02 ? C27 TVX 601 A 1 HETATM 28 C C3 TVX . . . C 2 44.121 -0.103 16.162 1 18.24 ? C3 TVX 601 A 1 HETATM 29 C C9 TVX . . . C 2 44.216 -4.429 16.115 1 22.77 ? C9 TVX 601 A 1 HETATM 30 N N2 TVX . . . C 2 46.644 -5.992 23.97 1 36.75 ? N2 TVX 601 A 1 HETATM 31 O O1 TVX . . . C 2 44.497 -6.623 14.435 1 46.97 ? O1 TVX 601 A 1 HETATM 32 O O2 TVX . . . C 2 44.139 1.233 16.202 1 23.08 ? O2 TVX 601 A 1 HETATM 33 O O3 TVX . . . C 2 44.714 -6.251 21.526 1 38.61 ? O3 TVX 601 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #