data_8DWL
#
_model_server_result.job_id            WWkVsd59_A7ULKNWNxasQA 
_model_server_result.datetime_utc      '2024-11-15 17:26:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8dwl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":401}' 
#
_entry.id    8DWL 
#
_exptl.entry_id    8DWL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8DWL 
_cell.length_a            90.343 
_cell.length_b            90.343 
_cell.length_c            196.332 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8DWL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,K,M 1 1 
B,D,G,H,I,J,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 63 C ASP 64 1_555 E ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc2 A NE2 HIS 65 C HIS 66 1_555 E ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc3 A OD2 ASP 91 C ASP 92 1_555 E ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc4 A OD2 ASP 91 C ASP 92 1_555 F ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc5 A OD1 ASN 123 C ASN 124 1_555 F ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc6 A NE2 HIS 172 C HIS 173 1_555 F ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc7 A ND1 HIS 247 C HIS 248 1_555 F ZN ZN . C ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc8 E ZN ZN . C ZN 401 1_555 K O HOH . C HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc9 E ZN ZN . C ZN 401 1_555 K O HOH . C HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc10 F ZN ZN . C ZN 402 1_555 K O HOH . C HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
metalc ? metalc11 B OD2 ASP 63 A ASP 64 1_555 I ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc12 B NE2 HIS 65 A HIS 66 1_555 I ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc13 B OD2 ASP 91 A ASP 92 1_555 I ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
metalc ? metalc14 B OD2 ASP 91 A ASP 92 1_555 J ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc15 B OD1 ASN 123 A ASN 124 1_555 J ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? 
metalc ? metalc16 B NE2 HIS 172 A HIS 173 1_555 J ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
metalc ? metalc17 B ND1 HIS 247 A HIS 248 1_555 J ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc18 I ZN ZN . A ZN 403 1_555 L O HOH . A HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc19 I ZN ZN . A ZN 403 1_555 L O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc20 J ZN ZN . A ZN 404 1_555 L O HOH . A HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     8DWL 
_atom_sites.fract_transf_matrix[1][1]    0.011069 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011069 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005093 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ZN C 1 401 401 ZN ZN . 
F 3 ZN C 1 402 402 ZN ZN . 
G 4 EDO A 1 401 301 EDO EDO . 
H 4 EDO A 1 402 302 EDO EDO . 
I 3 ZN A 1 403 401 ZN ZN . 
J 3 ZN A 1 404 402 ZN ZN . 
K 5 HOH C 1 501 352 HOH HOH . 
K 5 HOH C 2 502 356 HOH HOH . 
K 5 HOH C 3 503 317 HOH HOH . 
K 5 HOH C 4 504 313 HOH HOH . 
K 5 HOH C 5 505 302 HOH HOH . 
K 5 HOH C 6 506 314 HOH HOH . 
K 5 HOH C 7 507 315 HOH HOH . 
K 5 HOH C 8 508 325 HOH HOH . 
K 5 HOH C 9 509 117 HOH HOH . 
K 5 HOH C 10 510 17 HOH HOH . 
K 5 HOH C 11 511 46 HOH HOH . 
K 5 HOH C 12 512 300 HOH HOH . 
K 5 HOH C 13 513 100 HOH HOH . 
K 5 HOH C 14 514 26 HOH HOH . 
K 5 HOH C 15 515 74 HOH HOH . 
K 5 HOH C 16 516 45 HOH HOH . 
K 5 HOH C 17 517 44 HOH HOH . 
K 5 HOH C 18 518 39 HOH HOH . 
K 5 HOH C 19 519 123 HOH HOH . 
K 5 HOH C 20 520 70 HOH HOH . 
K 5 HOH C 21 521 333 HOH HOH . 
K 5 HOH C 22 522 40 HOH HOH . 
K 5 HOH C 23 523 148 HOH HOH . 
K 5 HOH C 24 524 340 HOH HOH . 
K 5 HOH C 25 525 63 HOH HOH . 
K 5 HOH C 26 526 9 HOH HOH . 
K 5 HOH C 27 527 43 HOH HOH . 
K 5 HOH C 28 528 79 HOH HOH . 
K 5 HOH C 29 529 84 HOH HOH . 
K 5 HOH C 30 530 53 HOH HOH . 
K 5 HOH C 31 531 7 HOH HOH . 
K 5 HOH C 32 532 307 HOH HOH . 
K 5 HOH C 33 533 370 HOH HOH . 
K 5 HOH C 34 534 303 HOH HOH . 
K 5 HOH C 35 535 36 HOH HOH . 
K 5 HOH C 36 536 338 HOH HOH . 
K 5 HOH C 37 537 28 HOH HOH . 
K 5 HOH C 38 538 14 HOH HOH . 
K 5 HOH C 39 539 37 HOH HOH . 
K 5 HOH C 40 540 122 HOH HOH . 
K 5 HOH C 41 541 11 HOH HOH . 
K 5 HOH C 42 542 8 HOH HOH . 
K 5 HOH C 43 543 20 HOH HOH . 
K 5 HOH C 44 544 129 HOH HOH . 
K 5 HOH C 45 545 90 HOH HOH . 
K 5 HOH C 46 546 299 HOH HOH . 
K 5 HOH C 47 547 305 HOH HOH . 
K 5 HOH C 48 548 304 HOH HOH . 
K 5 HOH C 49 549 109 HOH HOH . 
K 5 HOH C 50 550 156 HOH HOH . 
K 5 HOH C 51 551 366 HOH HOH . 
K 5 HOH C 52 552 335 HOH HOH . 
K 5 HOH C 53 553 59 HOH HOH . 
K 5 HOH C 54 554 334 HOH HOH . 
K 5 HOH C 55 555 316 HOH HOH . 
K 5 HOH C 56 556 341 HOH HOH . 
K 5 HOH C 57 557 57 HOH HOH . 
K 5 HOH C 58 558 318 HOH HOH . 
K 5 HOH C 59 559 32 HOH HOH . 
K 5 HOH C 60 560 110 HOH HOH . 
K 5 HOH C 61 561 332 HOH HOH . 
K 5 HOH C 62 562 54 HOH HOH . 
K 5 HOH C 63 563 209 HOH HOH . 
K 5 HOH C 64 564 208 HOH HOH . 
K 5 HOH C 65 565 360 HOH HOH . 
K 5 HOH C 66 566 277 HOH HOH . 
L 5 HOH A 1 501 351 HOH HOH . 
L 5 HOH A 2 502 365 HOH HOH . 
L 5 HOH A 3 503 27 HOH HOH . 
L 5 HOH A 4 504 130 HOH HOH . 
L 5 HOH A 5 505 367 HOH HOH . 
L 5 HOH A 6 506 38 HOH HOH . 
L 5 HOH A 7 507 359 HOH HOH . 
L 5 HOH A 8 508 324 HOH HOH . 
L 5 HOH A 9 509 329 HOH HOH . 
L 5 HOH A 10 510 339 HOH HOH . 
L 5 HOH A 11 511 362 HOH HOH . 
L 5 HOH A 12 512 21 HOH HOH . 
L 5 HOH A 13 513 34 HOH HOH . 
L 5 HOH A 14 514 25 HOH HOH . 
L 5 HOH A 15 515 30 HOH HOH . 
L 5 HOH A 16 516 350 HOH HOH . 
L 5 HOH A 17 517 337 HOH HOH . 
L 5 HOH A 18 518 311 HOH HOH . 
L 5 HOH A 19 519 308 HOH HOH . 
L 5 HOH A 20 520 88 HOH HOH . 
L 5 HOH A 21 521 127 HOH HOH . 
L 5 HOH A 22 522 5 HOH HOH . 
L 5 HOH A 23 523 35 HOH HOH . 
L 5 HOH A 24 524 13 HOH HOH . 
L 5 HOH A 25 525 349 HOH HOH . 
L 5 HOH A 26 526 371 HOH HOH . 
L 5 HOH A 27 527 353 HOH HOH . 
L 5 HOH A 28 528 22 HOH HOH . 
L 5 HOH A 29 529 174 HOH HOH . 
L 5 HOH A 30 530 52 HOH HOH . 
L 5 HOH A 31 531 73 HOH HOH . 
L 5 HOH A 32 532 10 HOH HOH . 
L 5 HOH A 33 533 18 HOH HOH . 
L 5 HOH A 34 534 342 HOH HOH . 
L 5 HOH A 35 535 15 HOH HOH . 
L 5 HOH A 36 536 12 HOH HOH . 
L 5 HOH A 37 537 330 HOH HOH . 
L 5 HOH A 38 538 104 HOH HOH . 
L 5 HOH A 39 539 345 HOH HOH . 
L 5 HOH A 40 540 51 HOH HOH . 
L 5 HOH A 41 541 328 HOH HOH . 
L 5 HOH A 42 542 347 HOH HOH . 
L 5 HOH A 43 543 61 HOH HOH . 
L 5 HOH A 44 544 24 HOH HOH . 
L 5 HOH A 45 545 102 HOH HOH . 
L 5 HOH A 46 546 327 HOH HOH . 
L 5 HOH A 47 547 369 HOH HOH . 
L 5 HOH A 48 548 177 HOH HOH . 
L 5 HOH A 49 549 166 HOH HOH . 
L 5 HOH A 50 550 312 HOH HOH . 
L 5 HOH A 51 551 76 HOH HOH . 
L 5 HOH A 52 552 56 HOH HOH . 
L 5 HOH A 53 553 320 HOH HOH . 
L 5 HOH A 54 554 331 HOH HOH . 
L 5 HOH A 55 555 94 HOH HOH . 
L 5 HOH A 56 556 309 HOH HOH . 
L 5 HOH A 57 557 291 HOH HOH . 
L 5 HOH A 58 558 321 HOH HOH . 
L 5 HOH A 59 559 276 HOH HOH . 
L 5 HOH A 60 560 211 HOH HOH . 
L 5 HOH A 61 561 204 HOH HOH . 
L 5 HOH A 62 562 66 HOH HOH . 
L 5 HOH A 63 563 67 HOH HOH . 
L 5 HOH A 64 564 185 HOH HOH . 
L 5 HOH A 65 565 310 HOH HOH . 
L 5 HOH A 66 566 368 HOH HOH . 
L 5 HOH A 67 567 128 HOH HOH . 
L 5 HOH A 68 568 252 HOH HOH . 
L 5 HOH A 69 569 373 HOH HOH . 
L 5 HOH A 70 570 355 HOH HOH . 
L 5 HOH A 71 571 169 HOH HOH . 
L 5 HOH A 72 572 336 HOH HOH . 
L 5 HOH A 73 573 343 HOH HOH . 
L 5 HOH A 74 574 364 HOH HOH . 
L 5 HOH A 75 575 372 HOH HOH . 
L 5 HOH A 76 576 319 HOH HOH . 
M 5 HOH D 1 101 323 HOH HOH . 
N 5 HOH B 1 101 361 HOH HOH . 
N 5 HOH B 2 102 357 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . G 4 96.167 48.391 77.133 1 79.89 ? C1 EDO 401 A 1 
HETATM 2 O O1 EDO . . . G 4 95.2 47.948 76.156 1 88.58 ? O1 EDO 401 A 1 
HETATM 3 C C2 EDO . . . G 4 97.467 47.581 77.031 1 82.3 ? C2 EDO 401 A 1 
HETATM 4 O O2 EDO . . . G 4 97.24 46.274 77.596 1 90.76 ? O2 EDO 401 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#