data_8E0G # _model_server_result.job_id x_BGT5puKdLVSwn8t7gSFA _model_server_result.datetime_utc '2025-03-06 05:31:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e0g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8E0G # _exptl.entry_id 8E0G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8E0G _cell.length_a 44.43 _cell.length_b 144 _cell.length_c 209.9 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E0G _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 89 A CYS 140 1_555 A SG CYS 166 A CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? disulf ? disulf2 B SG CYS 22 B CYS 24 1_555 B SG CYS 94 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? covale ? covale1 A C SER 2 A SER 53 1_555 A N A1A7R 3 A A1A7R 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale2 A C A1A7R 3 A A1A7R 54 1_555 A N SER 4 A SER 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale3 A C LEU 5 A LEU 56 1_555 A N YCM 6 A YCM 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale4 A C YCM 6 A YCM 57 1_555 A N PRO 7 A PRO 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.359 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 408 n n C10 C9 OLC doub 409 n n C10 C11 OLC sing 410 n n C9 C8 OLC sing 411 n n C17 C16 OLC sing 412 z n C11 C12 OLC sing 413 n n C8 C7 OLC sing 414 n n C24 C22 OLC sing 415 n n C24 O25 OLC sing 416 n n C16 C15 OLC sing 417 n n C12 C13 OLC sing 418 n n C7 C6 OLC sing 419 n n C15 C14 OLC sing 420 n n C13 C14 OLC sing 421 n n C6 C5 OLC sing 422 n n C5 C4 OLC sing 423 n n C4 C3 OLC sing 424 n n C3 C2 OLC sing 425 n n C2 C1 OLC sing 426 n n C21 C22 OLC sing 427 n n C21 O20 OLC sing 428 n n C1 O19 OLC doub 429 n n C1 O20 OLC sing 430 n n C22 O23 OLC sing 431 n n C18 H18 OLC sing 432 n n C18 H18A OLC sing 433 n n C18 H18B OLC sing 434 n n C10 H10 OLC sing 435 n n C9 H9 OLC sing 436 n n C17 H17 OLC sing 437 n n C17 H17A OLC sing 438 n n C11 H11 OLC sing 439 n n C11 H11A OLC sing 440 n n C8 H8 OLC sing 441 n n C8 H8A OLC sing 442 n n C24 H24 OLC sing 443 n n C24 H24A OLC sing 444 n n C16 H16 OLC sing 445 n n C16 H16A OLC sing 446 n n C12 H12 OLC sing 447 n n C12 H12A OLC sing 448 n n C7 H7 OLC sing 449 n n C7 H7A OLC sing 450 n n C15 H15 OLC sing 451 n n C15 H15A OLC sing 452 n n C13 H13 OLC sing 453 n n C13 H13A OLC sing 454 n n C6 H6 OLC sing 455 n n C6 H6A OLC sing 456 n n C14 H14 OLC sing 457 n n C14 H14A OLC sing 458 n n C5 H5 OLC sing 459 n n C5 H5A OLC sing 460 n n C4 H4 OLC sing 461 n n C4 H4A OLC sing 462 n n C3 H3 OLC sing 463 n n C3 H3A OLC sing 464 n n C2 H2 OLC sing 465 n n C2 H2A OLC sing 466 n n C21 H21 OLC sing 467 n n C21 H21A OLC sing 468 n n C22 H22 OLC sing 469 n n O25 HO25 OLC sing 470 n n O23 HO23 OLC sing 471 n n # _atom_sites.entry_id 8E0G _atom_sites.fract_transf_matrix[1][1] 0.022507 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006944 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 OLC A 1 401 402 OLC OLC . D 3 OLC A 1 402 403 OLC OLC . E 4 CLR A 1 403 404 CLR CLR . F 5 PO4 A 1 404 405 PO4 PO4 . G 6 P6G A 1 405 406 P6G P6G . H 7 PG4 A 1 406 407 PG4 P6G . I 8 HOH A 1 501 530 HOH HOH . I 8 HOH A 2 502 501 HOH HOH . I 8 HOH A 3 503 516 HOH HOH . I 8 HOH A 4 504 503 HOH HOH . I 8 HOH A 5 505 509 HOH HOH . I 8 HOH A 6 506 517 HOH HOH . I 8 HOH A 7 507 513 HOH HOH . I 8 HOH A 8 508 511 HOH HOH . I 8 HOH A 9 509 523 HOH HOH . I 8 HOH A 10 510 508 HOH HOH . I 8 HOH A 11 511 520 HOH HOH . I 8 HOH A 12 512 514 HOH HOH . I 8 HOH A 13 513 536 HOH HOH . I 8 HOH A 14 514 527 HOH HOH . I 8 HOH A 15 515 518 HOH HOH . I 8 HOH A 16 516 507 HOH HOH . I 8 HOH A 17 517 510 HOH HOH . I 8 HOH A 18 518 522 HOH HOH . I 8 HOH A 19 519 519 HOH HOH . I 8 HOH A 20 520 512 HOH HOH . I 8 HOH A 21 521 549 HOH HOH . I 8 HOH A 22 522 515 HOH HOH . I 8 HOH A 23 523 506 HOH HOH . I 8 HOH A 24 524 504 HOH HOH . I 8 HOH A 25 525 532 HOH HOH . I 8 HOH A 26 526 521 HOH HOH . I 8 HOH A 27 527 505 HOH HOH . I 8 HOH A 28 528 533 HOH HOH . I 8 HOH A 29 529 524 HOH HOH . I 8 HOH A 30 530 526 HOH HOH . I 8 HOH A 31 531 534 HOH HOH . I 8 HOH A 32 532 540 HOH HOH . I 8 HOH A 33 533 551 HOH HOH . I 8 HOH A 34 534 535 HOH HOH . I 8 HOH A 35 535 539 HOH HOH . I 8 HOH A 36 536 545 HOH HOH . I 8 HOH A 37 537 544 HOH HOH . I 8 HOH A 38 538 543 HOH HOH . I 8 HOH A 39 539 538 HOH HOH . I 8 HOH A 40 540 552 HOH HOH . I 8 HOH A 41 541 550 HOH HOH . I 8 HOH A 42 542 546 HOH HOH . I 8 HOH A 43 543 548 HOH HOH . I 8 HOH A 44 544 537 HOH HOH . I 8 HOH A 45 545 553 HOH HOH . I 8 HOH A 46 546 547 HOH HOH . I 8 HOH A 47 547 554 HOH HOH . I 8 HOH A 48 548 529 HOH HOH . I 8 HOH A 49 549 558 HOH HOH . I 8 HOH A 50 550 559 HOH HOH . I 8 HOH A 51 551 560 HOH HOH . I 8 HOH A 52 552 565 HOH HOH . I 8 HOH A 53 553 563 HOH HOH . I 8 HOH A 54 554 566 HOH HOH . J 8 HOH B 1 201 205 HOH HOH . J 8 HOH B 2 202 202 HOH HOH . J 8 HOH B 3 203 204 HOH HOH . J 8 HOH B 4 204 206 HOH HOH . J 8 HOH B 5 205 210 HOH HOH . J 8 HOH B 6 206 212 HOH HOH . J 8 HOH B 7 207 208 HOH HOH . J 8 HOH B 8 208 211 HOH HOH . J 8 HOH B 9 209 215 HOH HOH . J 8 HOH B 10 210 216 HOH HOH . J 8 HOH B 11 211 223 HOH HOH . J 8 HOH B 12 212 222 HOH HOH . J 8 HOH B 13 213 220 HOH HOH . J 8 HOH B 14 214 557 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 OLC . . . C 3 -13.449 6.447 -51.764 1 66.89 ? C9 OLC 401 A 1 HETATM 2 C C8 OLC . . . C 3 -14.222 7.27 -52.752 1 77.22 ? C8 OLC 401 A 1 HETATM 3 C C24 OLC . . . C 3 -15.982 8.526 -66.215 1 86.16 ? C24 OLC 401 A 1 HETATM 4 C C7 OLC . . . C 3 -14.299 6.641 -54.116 1 87.14 ? C7 OLC 401 A 1 HETATM 5 C C6 OLC . . . C 3 -15.036 7.467 -55.166 1 83.9 ? C6 OLC 401 A 1 HETATM 6 C C5 OLC . . . C 3 -14.738 7.061 -56.597 1 71.42 ? C5 OLC 401 A 1 HETATM 7 C C4 OLC . . . C 3 -15.624 7.711 -57.645 1 71.87 ? C4 OLC 401 A 1 HETATM 8 C C3 OLC . . . C 3 -15.474 7.102 -59.031 1 75.71 ? C3 OLC 401 A 1 HETATM 9 C C2 OLC . . . C 3 -16.008 7.975 -60.138 1 83.88 ? C2 OLC 401 A 1 HETATM 10 C C21 OLC . . . C 3 -15.996 7.846 -63.777 1 86.34 ? C21 OLC 401 A 1 HETATM 11 C C1 OLC . . . C 3 -15.383 7.687 -61.486 1 87.16 ? C1 OLC 401 A 1 HETATM 12 C C22 OLC . . . C 3 -15.52 8.846 -64.809 1 85.73 ? C22 OLC 401 A 1 HETATM 13 O O19 OLC . . . C 3 -14.491 6.904 -61.678 1 115.7 ? O19 OLC 401 A 1 HETATM 14 O O25 OLC . . . C 3 -15.499 9.483 -67.156 1 88.6 ? O25 OLC 401 A 1 HETATM 15 O O23 OLC . . . C 3 -15.973 10.153 -64.459 1 96.09 ? O23 OLC 401 A 1 HETATM 16 O O20 OLC . . . C 3 -15.92 8.429 -62.454 1 84.18 ? O20 OLC 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 380 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #