data_8E4L # _model_server_result.job_id t0uWbSfujZkxGxPW4yWp4Q _model_server_result.datetime_utc '2024-11-04 22:35:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1201}' # _entry.id 8E4L # _exptl.entry_id 8E4L _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8E4L _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 I N N ? 2 M N N ? 2 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 304 A CYS 303 1_555 A SG CYS 327 A CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? disulf ? disulf2 B SG CYS 304 B CYS 303 1_555 B SG CYS 327 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.897 ? disulf ? disulf3 C SG CYS 304 C CYS 303 1_555 C SG CYS 327 C CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.897 ? disulf ? disulf4 D SG CYS 304 D CYS 303 1_555 D SG CYS 327 D CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? metalc ? metalc1 A OE2 GLU 783 A GLU 782 1_555 E CA CA . A CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc2 A OE1 GLN 786 A GLN 785 1_555 E CA CA . A CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc3 A OD1 ASN 800 A ASN 799 1_555 E CA CA . A CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc4 A OD2 ASP 803 A ASP 802 1_555 E CA CA . A CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.082 ? metalc ? metalc5 B OE2 GLU 783 B GLU 782 1_555 I CA CA . B CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc6 B OE1 GLN 786 B GLN 785 1_555 I CA CA . B CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc7 B OD1 ASN 800 B ASN 799 1_555 I CA CA . B CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc8 B OD2 ASP 803 B ASP 802 1_555 I CA CA . B CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.082 ? metalc ? metalc9 C OE2 GLU 783 C GLU 782 1_555 M CA CA . C CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc10 C OE1 GLN 786 C GLN 785 1_555 M CA CA . C CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc11 C OD1 ASN 800 C ASN 799 1_555 M CA CA . C CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc12 C OD2 ASP 803 C ASP 802 1_555 M CA CA . C CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.083 ? metalc ? metalc13 D OE2 GLU 783 D GLU 782 1_555 Q CA CA . D CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc14 D OE1 GLN 786 D GLN 785 1_555 Q CA CA . D CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc15 D OD1 ASN 800 D ASN 799 1_555 Q CA CA . D CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc16 D OD2 ASP 803 D ASP 802 1_555 Q CA CA . D CA 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.083 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8E4L _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CA A 1 1201 1411 CA CA . F 3 UL9 A 1 1202 1412 UL9 ATC . G 4 ULO A 1 1203 1413 ULO C3 . H 5 PIO A 1 1204 1414 PIO PIO . I 2 CA B 1 1201 1411 CA CA . J 3 UL9 B 1 1202 1412 UL9 ATC . K 4 ULO B 1 1203 1413 ULO C3 . L 5 PIO B 1 1204 1414 PIO PIO . M 2 CA C 1 1201 1411 CA CA . N 3 UL9 C 1 1202 1412 UL9 ATC . O 4 ULO C 1 1203 1413 ULO C3 . P 5 PIO C 1 1204 1414 PIO PIO . Q 2 CA D 1 1201 1411 CA CA . R 3 UL9 D 1 1202 1412 UL9 ATC . S 4 ULO D 1 1203 1413 ULO C3 . T 5 PIO D 1 1204 1414 PIO PIO . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id Q _atom_site.label_entity_id 2 _atom_site.Cartn_x 132.961 _atom_site.Cartn_y 174.001 _atom_site.Cartn_z 167.296 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 132.65 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1201 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 57 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #