data_8E4P
#
_model_server_result.job_id            dCUryVe-xiLsCN9ZTzthGQ 
_model_server_result.datetime_utc      '2024-11-21 14:18:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8e4p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1202}' 
#
_entry.id    8E4P 
#
_exptl.entry_id    8E4P 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8E4P 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8E4P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 374 n n 
CBA CAB Y01 sing 375 n n 
CBA CAN Y01 sing 376 n n 
CAN CAJ Y01 sing 377 n n 
CAJ CAO Y01 sing 378 n n 
CAO CBB Y01 sing 379 n n 
CBB CAC Y01 sing 380 n n 
CBB CBE Y01 sing 381 n n 
CBE CAP Y01 sing 382 n n 
CBE CBI Y01 sing 383 n n 
CAP CAQ Y01 sing 384 n n 
CAQ CBG Y01 sing 385 n n 
CBG CBI Y01 sing 386 n n 
CBG CBD Y01 sing 387 n n 
CBI CAE Y01 sing 388 n n 
CBI CAU Y01 sing 389 n n 
CAU CAS Y01 sing 390 n n 
CAS CBF Y01 sing 391 n n 
CBF CBD Y01 sing 392 n n 
CBF CBH Y01 sing 393 n n 
CBD CAK Y01 sing 394 n n 
CAK CAI Y01 sing 395 n n 
CAI CAZ Y01 doub 396 n n 
CAZ CAV Y01 sing 397 n n 
CAZ CBH Y01 sing 398 n n 
CAV CBC Y01 sing 399 n n 
CBH CAD Y01 sing 400 n n 
CBH CAT Y01 sing 401 n n 
CAT CAR Y01 sing 402 n n 
CAR CBC Y01 sing 403 n n 
CBC OAW Y01 sing 404 n n 
OAW CAY Y01 sing 405 n n 
CAY OAG Y01 doub 406 n n 
CAY CAM Y01 sing 407 n n 
CAM CAL Y01 sing 408 n n 
CAL CAX Y01 sing 409 n n 
CAX OAH Y01 sing 410 n n 
CAX OAF Y01 doub 411 n n 
CAA HAA1 Y01 sing 412 n n 
CAA HAA2 Y01 sing 413 n n 
CAA HAA3 Y01 sing 414 n n 
CBA HBA Y01 sing 415 n n 
CAB HAB1 Y01 sing 416 n n 
CAB HAB2 Y01 sing 417 n n 
CAB HAB3 Y01 sing 418 n n 
CAN HAN1 Y01 sing 419 n n 
CAN HAN2 Y01 sing 420 n n 
CAJ HAJ1 Y01 sing 421 n n 
CAJ HAJ2 Y01 sing 422 n n 
CAO HAO1 Y01 sing 423 n n 
CAO HAO2 Y01 sing 424 n n 
CBB HBB Y01 sing 425 n n 
CAC HAC1 Y01 sing 426 n n 
CAC HAC2 Y01 sing 427 n n 
CAC HAC3 Y01 sing 428 n n 
CBE HBE Y01 sing 429 n n 
CAP HAP1 Y01 sing 430 n n 
CAP HAP2 Y01 sing 431 n n 
CAQ HAQ1 Y01 sing 432 n n 
CAQ HAQ2 Y01 sing 433 n n 
CBG HBG Y01 sing 434 n n 
CBD HBD Y01 sing 435 n n 
CAE HAE1 Y01 sing 436 n n 
CAE HAE2 Y01 sing 437 n n 
CAE HAE3 Y01 sing 438 n n 
CAU HAU1 Y01 sing 439 n n 
CAU HAU2 Y01 sing 440 n n 
CAS HAS1 Y01 sing 441 n n 
CAS HAS2 Y01 sing 442 n n 
CBF HBF Y01 sing 443 n n 
CAK HAK1 Y01 sing 444 n n 
CAK HAK2 Y01 sing 445 n n 
CAI HAI Y01 sing 446 n n 
CAV HAV1 Y01 sing 447 n n 
CAV HAV2 Y01 sing 448 n n 
CBC HBC Y01 sing 449 n n 
CAD HAD1 Y01 sing 450 n n 
CAD HAD2 Y01 sing 451 n n 
CAD HAD3 Y01 sing 452 n n 
CAT HAT1 Y01 sing 453 n n 
CAT HAT2 Y01 sing 454 n n 
CAR HAR1 Y01 sing 455 n n 
CAR HAR2 Y01 sing 456 n n 
CAM HAM1 Y01 sing 457 n n 
CAM HAM2 Y01 sing 458 n n 
CAL HAL1 Y01 sing 459 n n 
CAL HAL2 Y01 sing 460 n n 
OAH HAH Y01 sing 461 n n 
#
_atom_sites.entry_id                     8E4P 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 Y01 A 1 1201 1201 Y01 LIG . 
F 2 Y01 A 1 1202 1301 Y01 LIG . 
G 2 Y01 A 1 1203 1401 Y01 LIG . 
H 2 Y01 B 1 1201 1201 Y01 LIG . 
I 2 Y01 B 1 1202 1301 Y01 LIG . 
J 2 Y01 B 1 1203 1401 Y01 LIG . 
K 2 Y01 C 1 1201 1201 Y01 LIG . 
L 2 Y01 C 1 1202 1301 Y01 LIG . 
M 2 Y01 C 1 1203 1401 Y01 LIG . 
N 2 Y01 D 1 1201 1201 Y01 LIG . 
O 2 Y01 D 1 1202 1301 Y01 LIG . 
P 2 Y01 D 1 1203 1401 Y01 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAJ Y01 . . . I 2 149.487 141.01 213.142 1 20 ? CAJ Y01 1202 B 1 
HETATM 2 C CAO Y01 . . . I 2 150.59 142.053 213.402 1 20 ? CAO Y01 1202 B 1 
HETATM 3 C CBB Y01 . . . I 2 150.401 143.325 212.556 1 20 ? CBB Y01 1202 B 1 
HETATM 4 C CAC Y01 . . . I 2 151.406 144.398 213.015 1 20 ? CAC Y01 1202 B 1 
HETATM 5 C CBE Y01 . . . I 2 150.642 142.969 211.079 1 20 ? CBE Y01 1202 B 1 
HETATM 6 C CAP Y01 . . . I 2 149.423 142.173 210.535 1 20 ? CAP Y01 1202 B 1 
HETATM 7 C CAQ Y01 . . . I 2 149.108 142.76 209.131 1 20 ? CAQ Y01 1202 B 1 
HETATM 8 C CBG Y01 . . . I 2 150.35 143.622 208.809 1 20 ? CBG Y01 1202 B 1 
HETATM 9 C CBI Y01 . . . I 2 150.703 144.218 210.171 1 20 ? CBI Y01 1202 B 1 
HETATM 10 C CAE Y01 . . . I 2 149.707 145.307 210.599 1 20 ? CAE Y01 1202 B 1 
HETATM 11 C CAU Y01 . . . I 2 152.135 144.744 210.091 1 20 ? CAU Y01 1202 B 1 
HETATM 12 C CAS Y01 . . . I 2 152.419 145.619 208.85 1 20 ? CAS Y01 1202 B 1 
HETATM 13 C CBF Y01 . . . I 2 151.681 145.273 207.521 1 20 ? CBF Y01 1202 B 1 
HETATM 14 C CBD Y01 . . . I 2 150.267 144.699 207.723 1 20 ? CBD Y01 1202 B 1 
HETATM 15 C CAK Y01 . . . I 2 149.781 144.157 206.38 1 20 ? CAK Y01 1202 B 1 
HETATM 16 C CAI Y01 . . . I 2 150.107 145.14 205.244 1 20 ? CAI Y01 1202 B 1 
HETATM 17 C CAZ Y01 . . . I 2 150.866 146.244 205.333 1 20 ? CAZ Y01 1202 B 1 
HETATM 18 C CAV Y01 . . . I 2 151.251 147.284 204.272 1 20 ? CAV Y01 1202 B 1 
HETATM 19 C CBH Y01 . . . I 2 151.464 146.583 206.72 1 20 ? CBH Y01 1202 B 1 
HETATM 20 C CAD Y01 . . . I 2 150.679 147.648 207.504 1 20 ? CAD Y01 1202 B 1 
HETATM 21 C CAT Y01 . . . I 2 152.984 146.882 206.611 1 20 ? CAT Y01 1202 B 1 
HETATM 22 C CAR Y01 . . . I 2 153.436 147.73 205.404 1 20 ? CAR Y01 1202 B 1 
HETATM 23 C CBC Y01 . . . I 2 152.771 147.31 204.087 1 20 ? CBC Y01 1202 B 1 
HETATM 24 O OAW Y01 . . . I 2 153.094 148.246 203.054 1 20 ? OAW Y01 1202 B 1 
HETATM 25 C CAY Y01 . . . I 2 153.876 147.699 201.989 1 20 ? CAY Y01 1202 B 1 
HETATM 26 O OAG Y01 . . . I 2 153.494 146.712 201.404 1 20 ? OAG Y01 1202 B 1 
HETATM 27 C CAM Y01 . . . I 2 155.199 148.368 201.574 1 20 ? CAM Y01 1202 B 1 
HETATM 28 C CAL Y01 . . . I 2 154.992 149.428 200.476 1 20 ? CAL Y01 1202 B 1 
HETATM 29 C CAX Y01 . . . I 2 156.321 149.951 199.9 1 20 ? CAX Y01 1202 B 1 
HETATM 30 O OAH Y01 . . . I 2 157.243 150.202 200.641 1 20 ? OAH Y01 1202 B 1 
HETATM 31 O OAF Y01 . . . I 2 156.442 150.109 198.706 1 20 ? OAF Y01 1202 B 1 
HETATM 32 H HAJ1 Y01 . . . I 2 149.22 140.552 214.071 1 20 ? HAJ1 Y01 1202 B 1 
HETATM 33 H HAJ2 Y01 . . . I 2 148.627 141.502 212.738 1 20 ? HAJ2 Y01 1202 B 1 
HETATM 34 H HAO1 Y01 . . . I 2 151.541 141.622 213.168 1 20 ? HAO1 Y01 1202 B 1 
HETATM 35 H HAO2 Y01 . . . I 2 150.575 142.318 214.439 1 20 ? HAO2 Y01 1202 B 1 
HETATM 36 H HBB Y01 . . . I 2 149.402 143.69 212.677 1 20 ? HBB Y01 1202 B 1 
HETATM 37 H HAC1 Y01 . . . I 2 152.396 144.097 212.744 1 20 ? HAC1 Y01 1202 B 1 
HETATM 38 H HAC2 Y01 . . . I 2 151.344 144.513 214.077 1 20 ? HAC2 Y01 1202 B 1 
HETATM 39 H HAC3 Y01 . . . I 2 151.175 145.329 212.542 1 20 ? HAC3 Y01 1202 B 1 
HETATM 40 H HBE Y01 . . . I 2 151.538 142.394 210.972 1 20 ? HBE Y01 1202 B 1 
HETATM 41 H HAP1 Y01 . . . I 2 148.582 142.306 211.183 1 20 ? HAP1 Y01 1202 B 1 
HETATM 42 H HAP2 Y01 . . . I 2 149.667 141.135 210.451 1 20 ? HAP2 Y01 1202 B 1 
HETATM 43 H HAQ1 Y01 . . . I 2 148.997 141.975 208.412 1 20 ? HAQ1 Y01 1202 B 1 
HETATM 44 H HAQ2 Y01 . . . I 2 148.23 143.371 209.174 1 20 ? HAQ2 Y01 1202 B 1 
HETATM 45 H HBG Y01 . . . I 2 151.142 142.957 208.535 1 20 ? HBG Y01 1202 B 1 
HETATM 46 H HBD Y01 . . . I 2 149.61 145.478 208.048 1 20 ? HBD Y01 1202 B 1 
HETATM 47 H HAE1 Y01 . . . I 2 149.661 146.063 209.844 1 20 ? HAE1 Y01 1202 B 1 
HETATM 48 H HAE2 Y01 . . . I 2 148.738 144.874 210.734 1 20 ? HAE2 Y01 1202 B 1 
HETATM 49 H HAE3 Y01 . . . I 2 150.031 145.744 211.521 1 20 ? HAE3 Y01 1202 B 1 
HETATM 50 H HAU1 Y01 . . . I 2 152.333 145.328 210.965 1 20 ? HAU1 Y01 1202 B 1 
HETATM 51 H HAU2 Y01 . . . I 2 152.804 143.909 210.077 1 20 ? HAU2 Y01 1202 B 1 
HETATM 52 H HAS1 Y01 . . . I 2 152.19 146.628 209.116 1 20 ? HAS1 Y01 1202 B 1 
HETATM 53 H HAS2 Y01 . . . I 2 153.47 145.56 208.655 1 20 ? HAS2 Y01 1202 B 1 
HETATM 54 H HBF Y01 . . . I 2 152.276 144.594 206.947 1 20 ? HBF Y01 1202 B 1 
HETATM 55 H HAK1 Y01 . . . I 2 150.364 143.281 206.184 1 20 ? HAK1 Y01 1202 B 1 
HETATM 56 H HAK2 Y01 . . . I 2 148.713 144.132 206.447 1 20 ? HAK2 Y01 1202 B 1 
HETATM 57 H HAI Y01 . . . I 2 149.698 144.915 204.281 1 20 ? HAI Y01 1202 B 1 
HETATM 58 H HAV1 Y01 . . . I 2 150.991 148.237 204.685 1 20 ? HAV1 Y01 1202 B 1 
HETATM 59 H HAV2 Y01 . . . I 2 150.851 146.923 203.348 1 20 ? HAV2 Y01 1202 B 1 
HETATM 60 H HBC Y01 . . . I 2 153.112 146.335 203.809 1 20 ? HBC Y01 1202 B 1 
HETATM 61 H HAD1 Y01 . . . I 2 149.957 147.166 208.129 1 20 ? HAD1 Y01 1202 B 1 
HETATM 62 H HAD2 Y01 . . . I 2 150.178 148.3 206.82 1 20 ? HAD2 Y01 1202 B 1 
HETATM 63 H HAD3 Y01 . . . I 2 151.354 148.218 208.108 1 20 ? HAD3 Y01 1202 B 1 
HETATM 64 H HAT1 Y01 . . . I 2 153.286 147.429 207.48 1 20 ? HAT1 Y01 1202 B 1 
HETATM 65 H HAT2 Y01 . . . I 2 153.513 145.953 206.586 1 20 ? HAT2 Y01 1202 B 1 
HETATM 66 H HAR1 Y01 . . . I 2 153.195 148.755 205.595 1 20 ? HAR1 Y01 1202 B 1 
HETATM 67 H HAR2 Y01 . . . I 2 154.496 147.632 205.295 1 20 ? HAR2 Y01 1202 B 1 
HETATM 68 H HAM1 Y01 . . . I 2 155.632 148.838 202.432 1 20 ? HAM1 Y01 1202 B 1 
HETATM 69 H HAM2 Y01 . . . I 2 155.87 147.615 201.215 1 20 ? HAM2 Y01 1202 B 1 
HETATM 70 H HAL1 Y01 . . . I 2 154.446 150.25 200.891 1 20 ? HAL1 Y01 1202 B 1 
HETATM 71 H HAL2 Y01 . . . I 2 154.417 148.997 199.684 1 20 ? HAL2 Y01 1202 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    62 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           71 
#