data_8E5S
#
_model_server_result.job_id            AtvZEiLaFwrI9j857hJ-Yw 
_model_server_result.datetime_utc      '2024-11-21 13:01:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8e5s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    8E5S 
#
_exptl.entry_id    8E5S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8E5S 
_cell.length_a            58.658 
_cell.length_b            70.85 
_cell.length_c            98.342 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8E5S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 274 A ASP 296 1_555 B NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? 
metalc ? metalc2 A OD2 ASP 274 A ASP 296 1_555 B NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc3 A OD1 ASP 347 A ASP 369 1_555 B NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? 
metalc ? metalc4 A OD2 ASP 347 A ASP 369 1_555 B NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? 
metalc ? metalc5 A OG SER 349 A SER 371 1_555 B NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.185 ? 
metalc ? metalc6 B NA NA . A NA 501 1_555 GA O HOH . A HOH 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8E5S 
_atom_sites.fract_transf_matrix[1][1]    0.017048 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014114 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010169 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 501 501 NA NA . 
C 3 CL A 1 502 502 CL CL . 
D 4 OLC A 1 503 503 OLC OLC . 
E 4 OLC A 1 504 504 OLC OLC . 
F 4 OLC A 1 505 505 OLC OLC . 
G 4 OLC A 1 506 506 OLC OLC . 
H 4 OLC A 1 507 507 OLC OLC . 
I 4 OLC A 1 508 508 OLC OLC . 
J 4 OLC A 1 509 509 OLC OLC . 
K 4 OLC A 1 510 510 OLC OLC . 
L 4 OLC A 1 511 511 OLC OLC . 
M 4 OLC A 1 512 512 OLC OLC . 
N 4 OLC A 1 513 513 OLC OLC . 
O 4 OLC A 1 514 514 OLC OLC . 
P 4 OLC A 1 515 515 OLC OLC . 
Q 4 OLC A 1 516 516 OLC OLC . 
R 4 OLC A 1 517 517 OLC OLC . 
S 4 OLC A 1 518 518 OLC OLC . 
T 4 OLC A 1 519 519 OLC OLC . 
U 4 OLC A 1 520 520 OLC OLC . 
V 4 OLC A 1 521 521 OLC OLC . 
W 4 OLC A 1 522 522 OLC OLC . 
X 4 OLC A 1 523 523 OLC OLC . 
Y 4 OLC A 1 524 524 OLC OLC . 
Z 4 OLC A 1 525 525 OLC OLC . 
AA 4 OLC A 1 526 526 OLC OLC . 
BA 5 PEG A 1 527 527 PEG PEG . 
CA 5 PEG A 1 528 528 PEG PEG . 
DA 5 PEG A 1 529 529 PEG PEG . 
EA 6 GOL A 1 530 530 GOL GOL . 
FA 6 GOL A 1 531 531 GOL GOL . 
GA 7 HOH A 1 601 646 HOH HOH . 
GA 7 HOH A 2 602 603 HOH HOH . 
GA 7 HOH A 3 603 601 HOH HOH . 
GA 7 HOH A 4 604 602 HOH HOH . 
GA 7 HOH A 5 605 618 HOH HOH . 
GA 7 HOH A 6 606 604 HOH HOH . 
GA 7 HOH A 7 607 639 HOH HOH . 
GA 7 HOH A 8 608 626 HOH HOH . 
GA 7 HOH A 9 609 606 HOH HOH . 
GA 7 HOH A 10 610 607 HOH HOH . 
GA 7 HOH A 11 611 620 HOH HOH . 
GA 7 HOH A 12 612 612 HOH HOH . 
GA 7 HOH A 13 613 617 HOH HOH . 
GA 7 HOH A 14 614 621 HOH HOH . 
GA 7 HOH A 15 615 613 HOH HOH . 
GA 7 HOH A 16 616 622 HOH HOH . 
GA 7 HOH A 17 617 632 HOH HOH . 
GA 7 HOH A 18 618 619 HOH HOH . 
GA 7 HOH A 19 619 629 HOH HOH . 
GA 7 HOH A 20 620 628 HOH HOH . 
GA 7 HOH A 21 621 623 HOH HOH . 
GA 7 HOH A 22 622 640 HOH HOH . 
GA 7 HOH A 23 623 609 HOH HOH . 
GA 7 HOH A 24 624 625 HOH HOH . 
GA 7 HOH A 25 625 624 HOH HOH . 
GA 7 HOH A 26 626 616 HOH HOH . 
GA 7 HOH A 27 627 630 HOH HOH . 
GA 7 HOH A 28 628 608 HOH HOH . 
GA 7 HOH A 29 629 615 HOH HOH . 
GA 7 HOH A 30 630 614 HOH HOH . 
GA 7 HOH A 31 631 627 HOH HOH . 
GA 7 HOH A 32 632 645 HOH HOH . 
GA 7 HOH A 33 633 635 HOH HOH . 
GA 7 HOH A 34 634 631 HOH HOH . 
GA 7 HOH A 35 635 605 HOH HOH . 
GA 7 HOH A 36 636 633 HOH HOH . 
GA 7 HOH A 37 637 611 HOH HOH . 
GA 7 HOH A 38 638 638 HOH HOH . 
GA 7 HOH A 39 639 610 HOH HOH . 
GA 7 HOH A 40 640 634 HOH HOH . 
GA 7 HOH A 41 641 636 HOH HOH . 
GA 7 HOH A 42 642 641 HOH HOH . 
GA 7 HOH A 43 643 647 HOH HOH . 
GA 7 HOH A 44 644 644 HOH HOH . 
GA 7 HOH A 45 645 642 HOH HOH . 
GA 7 HOH A 46 646 643 HOH HOH . 
GA 7 HOH A 47 647 637 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -4.592 
_atom_site.Cartn_y               -15.769 
_atom_site.Cartn_z               39.714 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        45.32 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#