data_8E5Z # _model_server_result.job_id zg7LHFe8sT0m0rHrU_Y10w _model_server_result.datetime_utc '2024-11-19 12:30:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e5z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8E5Z # _exptl.entry_id 8E5Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 591.695 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R,2S)-2-[(N-{[2-(benzenesulfonyl)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.22 _cell.angle_gamma 90 _cell.entry_id 8E5Z _cell.length_a 54.687 _cell.length_b 98.352 _cell.length_c 58.334 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E5Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 149 A CYS 145 1_555 C C22 WJB . A WJB 401 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.805 ? covale ? covale2 A SG CYS 149 A CYS 145 1_555 D C22 UQO . A UQO 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.821 ? covale ? covale3 B SG CYS 149 B CYS 145 1_555 E C22 WJB . B WJB 401 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.79 ? covale ? covale4 B SG CYS 149 B CYS 145 1_555 F C22 UQO . B UQO 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.806 ? # _chem_comp.formula 'C24 H37 N3 O10 S2' _chem_comp.formula_weight 591.695 _chem_comp.id WJB _chem_comp.mon_nstd_flag . _chem_comp.name '(1R,2S)-2-[(N-{[2-(benzenesulfonyl)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C32 C31 WJB doub 453 n y C32 C33 WJB sing 454 n y C31 C30 WJB sing 455 n y C33 C28 WJB doub 456 n y C30 C29 WJB doub 457 n y C28 C29 WJB sing 458 n y C28 S27 WJB sing 459 n n O35 S27 WJB doub 460 n n C01 C02 WJB sing 461 n n S27 C02 WJB sing 462 n n S27 O34 WJB doub 463 n n C02 C03 WJB sing 464 n n C02 C26 WJB sing 465 n n C03 O04 WJB sing 466 n n O04 C05 WJB sing 467 n n C05 N06 WJB sing 468 n n C05 O25 WJB doub 469 n n C19 C20 WJB sing 470 n n C19 N18 WJB sing 471 n n N06 C07 WJB sing 472 n n C20 C16 WJB sing 473 n n O24 C12 WJB doub 474 n n N18 C17 WJB sing 475 n n C07 C12 WJB sing 476 n n C07 C08 WJB sing 477 n n C12 N13 WJB sing 478 n n C16 C17 WJB sing 479 n n C16 C15 WJB sing 480 n n C17 O21 WJB doub 481 n n C08 C09 WJB sing 482 n n C09 C10 WJB sing 483 n n C09 C11 WJB sing 484 n n N13 C14 WJB sing 485 n n C14 C15 WJB sing 486 n n C14 C22 WJB sing 487 n n O23 C22 WJB sing 488 n n C22 S2 WJB sing 489 n n C07 H1 WJB sing 490 n n C08 H2 WJB sing 491 n n C08 H3 WJB sing 492 n n C09 H4 WJB sing 493 n n C10 H5 WJB sing 494 n n C10 H6 WJB sing 495 n n C10 H7 WJB sing 496 n n C14 H8 WJB sing 497 n n C15 H9 WJB sing 498 n n C15 H10 WJB sing 499 n n C16 H11 WJB sing 500 n n C19 H12 WJB sing 501 n n C19 H13 WJB sing 502 n n C20 H14 WJB sing 503 n n C20 H15 WJB sing 504 n n C22 H16 WJB sing 505 n n C26 H17 WJB sing 506 n n C26 H18 WJB sing 507 n n C26 H19 WJB sing 508 n n C30 H20 WJB sing 509 n n C01 H22 WJB sing 510 n n C01 H23 WJB sing 511 n n C01 H24 WJB sing 512 n n C03 H25 WJB sing 513 n n C03 H26 WJB sing 514 n n C11 H27 WJB sing 515 n n C11 H28 WJB sing 516 n n C11 H29 WJB sing 517 n n C29 H30 WJB sing 518 n n C31 H31 WJB sing 519 n n C32 H32 WJB sing 520 n n C33 H33 WJB sing 521 n n N06 H34 WJB sing 522 n n N13 H35 WJB sing 523 n n N18 H36 WJB sing 524 n n O23 H37 WJB sing 525 n n S2 O1 WJB sing 526 n n S2 O2 WJB doub 527 n n S2 O3 WJB doub 528 n n O1 H21 WJB sing 529 n n # _atom_sites.entry_id 8E5Z _atom_sites.fract_transf_matrix[1][1] 0.018286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005667 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WJB A 1 401 401 WJB WJB . D 3 UQO A 1 402 402 UQO UQO . E 2 WJB B 1 401 401 WJB WJB . F 3 UQO B 1 402 402 UQO UQO . G 4 HOH A 1 501 501 HOH HOH . G 4 HOH A 2 502 502 HOH HOH . G 4 HOH A 3 503 503 HOH HOH . G 4 HOH A 4 504 504 HOH HOH . G 4 HOH A 5 505 505 HOH HOH . G 4 HOH A 6 506 506 HOH HOH . G 4 HOH A 7 507 507 HOH HOH . G 4 HOH A 8 508 508 HOH HOH . G 4 HOH A 9 509 509 HOH HOH . G 4 HOH A 10 510 510 HOH HOH . G 4 HOH A 11 511 511 HOH HOH . G 4 HOH A 12 512 512 HOH HOH . G 4 HOH A 13 513 513 HOH HOH . G 4 HOH A 14 514 514 HOH HOH . G 4 HOH A 15 515 515 HOH HOH . G 4 HOH A 16 516 516 HOH HOH . G 4 HOH A 17 517 517 HOH HOH . G 4 HOH A 18 518 518 HOH HOH . G 4 HOH A 19 519 519 HOH HOH . G 4 HOH A 20 520 520 HOH HOH . G 4 HOH A 21 521 521 HOH HOH . G 4 HOH A 22 522 522 HOH HOH . G 4 HOH A 23 523 523 HOH HOH . G 4 HOH A 24 524 524 HOH HOH . G 4 HOH A 25 525 525 HOH HOH . G 4 HOH A 26 526 526 HOH HOH . G 4 HOH A 27 527 527 HOH HOH . G 4 HOH A 28 528 528 HOH HOH . G 4 HOH A 29 529 529 HOH HOH . G 4 HOH A 30 530 530 HOH HOH . G 4 HOH A 31 531 531 HOH HOH . G 4 HOH A 32 532 532 HOH HOH . G 4 HOH A 33 533 533 HOH HOH . G 4 HOH A 34 534 534 HOH HOH . G 4 HOH A 35 535 535 HOH HOH . G 4 HOH A 36 536 536 HOH HOH . G 4 HOH A 37 537 537 HOH HOH . G 4 HOH A 38 538 538 HOH HOH . G 4 HOH A 39 539 539 HOH HOH . G 4 HOH A 40 540 540 HOH HOH . G 4 HOH A 41 541 541 HOH HOH . G 4 HOH A 42 542 542 HOH HOH . G 4 HOH A 43 543 543 HOH HOH . G 4 HOH A 44 544 544 HOH HOH . G 4 HOH A 45 545 545 HOH HOH . G 4 HOH A 46 546 546 HOH HOH . G 4 HOH A 47 547 547 HOH HOH . G 4 HOH A 48 548 548 HOH HOH . G 4 HOH A 49 549 549 HOH HOH . G 4 HOH A 50 550 550 HOH HOH . G 4 HOH A 51 551 551 HOH HOH . G 4 HOH A 52 552 552 HOH HOH . G 4 HOH A 53 553 553 HOH HOH . G 4 HOH A 54 554 554 HOH HOH . G 4 HOH A 55 555 555 HOH HOH . G 4 HOH A 56 556 556 HOH HOH . G 4 HOH A 57 557 557 HOH HOH . G 4 HOH A 58 558 558 HOH HOH . G 4 HOH A 59 559 559 HOH HOH . G 4 HOH A 60 560 560 HOH HOH . G 4 HOH A 61 561 561 HOH HOH . G 4 HOH A 62 562 562 HOH HOH . G 4 HOH A 63 563 563 HOH HOH . G 4 HOH A 64 564 564 HOH HOH . G 4 HOH A 65 565 565 HOH HOH . G 4 HOH A 66 566 566 HOH HOH . G 4 HOH A 67 567 567 HOH HOH . G 4 HOH A 68 568 568 HOH HOH . G 4 HOH A 69 569 569 HOH HOH . G 4 HOH A 70 570 570 HOH HOH . G 4 HOH A 71 571 571 HOH HOH . G 4 HOH A 72 572 572 HOH HOH . H 4 HOH B 1 501 501 HOH HOH . H 4 HOH B 2 502 502 HOH HOH . H 4 HOH B 3 503 503 HOH HOH . H 4 HOH B 4 504 504 HOH HOH . H 4 HOH B 5 505 505 HOH HOH . H 4 HOH B 6 506 506 HOH HOH . H 4 HOH B 7 507 507 HOH HOH . H 4 HOH B 8 508 508 HOH HOH . H 4 HOH B 9 509 509 HOH HOH . H 4 HOH B 10 510 510 HOH HOH . H 4 HOH B 11 511 511 HOH HOH . H 4 HOH B 12 512 512 HOH HOH . H 4 HOH B 13 513 513 HOH HOH . H 4 HOH B 14 514 514 HOH HOH . H 4 HOH B 15 515 515 HOH HOH . H 4 HOH B 16 516 516 HOH HOH . H 4 HOH B 17 517 517 HOH HOH . H 4 HOH B 18 518 518 HOH HOH . H 4 HOH B 19 519 519 HOH HOH . H 4 HOH B 20 520 520 HOH HOH . H 4 HOH B 21 521 521 HOH HOH . H 4 HOH B 22 522 522 HOH HOH . H 4 HOH B 23 523 523 HOH HOH . H 4 HOH B 24 524 524 HOH HOH . H 4 HOH B 25 525 525 HOH HOH . H 4 HOH B 26 526 526 HOH HOH . H 4 HOH B 27 527 527 HOH HOH . H 4 HOH B 28 528 528 HOH HOH . H 4 HOH B 29 529 529 HOH HOH . H 4 HOH B 30 530 530 HOH HOH . H 4 HOH B 31 531 531 HOH HOH . H 4 HOH B 32 532 532 HOH HOH . H 4 HOH B 33 533 533 HOH HOH . H 4 HOH B 34 534 534 HOH HOH . H 4 HOH B 35 535 535 HOH HOH . H 4 HOH B 36 536 536 HOH HOH . H 4 HOH B 37 537 537 HOH HOH . H 4 HOH B 38 538 538 HOH HOH . H 4 HOH B 39 539 539 HOH HOH . H 4 HOH B 40 540 540 HOH HOH . H 4 HOH B 41 541 541 HOH HOH . H 4 HOH B 42 542 542 HOH HOH . H 4 HOH B 43 543 543 HOH HOH . H 4 HOH B 44 544 544 HOH HOH . H 4 HOH B 45 545 545 HOH HOH . H 4 HOH B 46 546 546 HOH HOH . H 4 HOH B 47 547 547 HOH HOH . H 4 HOH B 48 548 548 HOH HOH . H 4 HOH B 49 549 549 HOH HOH . H 4 HOH B 50 550 550 HOH HOH . H 4 HOH B 51 551 551 HOH HOH . H 4 HOH B 52 552 552 HOH HOH . H 4 HOH B 53 553 553 HOH HOH . H 4 HOH B 54 554 554 HOH HOH . H 4 HOH B 55 555 555 HOH HOH . H 4 HOH B 56 556 556 HOH HOH . H 4 HOH B 57 557 557 HOH HOH . H 4 HOH B 58 558 558 HOH HOH . H 4 HOH B 59 559 559 HOH HOH . H 4 HOH B 60 560 560 HOH HOH . H 4 HOH B 61 561 561 HOH HOH . H 4 HOH B 62 562 562 HOH HOH . H 4 HOH B 63 563 563 HOH HOH . H 4 HOH B 64 564 564 HOH HOH . H 4 HOH B 65 565 565 HOH HOH . H 4 HOH B 66 566 566 HOH HOH . H 4 HOH B 67 567 567 HOH HOH . H 4 HOH B 68 568 568 HOH HOH . H 4 HOH B 69 569 569 HOH HOH . H 4 HOH B 70 570 570 HOH HOH . H 4 HOH B 71 571 571 HOH HOH . H 4 HOH B 72 572 572 HOH HOH . H 4 HOH B 73 573 573 HOH HOH . H 4 HOH B 74 574 574 HOH HOH . H 4 HOH B 75 575 575 HOH HOH . H 4 HOH B 76 576 576 HOH HOH . H 4 HOH B 77 577 577 HOH HOH . H 4 HOH B 78 578 578 HOH HOH . H 4 HOH B 79 579 579 HOH HOH . H 4 HOH B 80 580 580 HOH HOH . H 4 HOH B 81 581 581 HOH HOH . H 4 HOH B 82 582 582 HOH HOH . H 4 HOH B 83 583 583 HOH HOH . H 4 HOH B 84 584 584 HOH HOH . H 4 HOH B 85 585 585 HOH HOH . H 4 HOH B 86 586 586 HOH HOH . H 4 HOH B 87 587 587 HOH HOH . H 4 HOH B 88 588 588 HOH HOH . H 4 HOH B 89 589 589 HOH HOH . H 4 HOH B 90 590 590 HOH HOH . H 4 HOH B 91 591 591 HOH HOH . H 4 HOH B 92 592 592 HOH HOH . H 4 HOH B 93 593 593 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 WJB . A . C 2 10.824 27.956 24.533 0.5 59.99 ? C02 WJB 401 A 1 HETATM 2 C C05 WJB . A . C 2 11.224 24.209 25.429 0.5 44.38 ? C05 WJB 401 A 1 HETATM 3 C C07 WJB . A . C 2 12.108 22.192 26.638 0.5 39.49 ? C07 WJB 401 A 1 HETATM 4 C C08 WJB . A . C 2 13.217 21.883 27.684 0.5 38.31 ? C08 WJB 401 A 1 HETATM 5 C C09 WJB . A . C 2 14.607 22.42 27.302 0.5 40.9 ? C09 WJB 401 A 1 HETATM 6 C C10 WJB . A . C 2 15.676 22.153 28.373 0.5 42.96 ? C10 WJB 401 A 1 HETATM 7 C C12 WJB . A . C 2 10.713 21.694 27.147 0.5 38.23 ? C12 WJB 401 A 1 HETATM 8 C C14 WJB . A . C 2 8.937 19.902 27.287 0.5 34.55 ? C14 WJB 401 A 1 HETATM 9 C C15 WJB . A . C 2 7.922 19.761 26.113 0.5 30.83 ? C15 WJB 401 A 1 HETATM 10 C C16 WJB . A . C 2 7.522 21.111 25.491 0.5 33.55 ? C16 WJB 401 A 1 HETATM 11 C C17 WJB . A . C 2 6.649 20.985 24.25 0.5 32.6 ? C17 WJB 401 A 1 HETATM 12 C C19 WJB . A . C 2 5.619 22.676 25.601 0.5 33.65 ? C19 WJB 401 A 1 HETATM 13 C C20 WJB . A . C 2 6.721 22.022 26.457 0.5 33.96 ? C20 WJB 401 A 1 HETATM 14 C C22 WJB . A . C 2 9.15 18.501 27.89 0.5 29.27 ? C22 WJB 401 A 1 HETATM 15 C C26 WJB . A . C 2 11.952 28.983 24.569 0.5 61.55 ? C26 WJB 401 A 1 HETATM 16 C C28 WJB . A . C 2 9.085 29.871 23.19 0.5 65.28 ? C28 WJB 401 A 1 HETATM 17 C C01 WJB . A . C 2 9.916 28.142 25.734 0.5 55.18 ? C01 WJB 401 A 1 HETATM 18 C C03 WJB . A . C 2 11.473 26.509 24.564 0.5 51.74 ? C03 WJB 401 A 1 HETATM 19 C C11 WJB . A . C 2 15.093 21.829 25.977 0.5 42.51 ? C11 WJB 401 A 1 HETATM 20 N N06 WJB . A . C 2 12.104 23.647 26.352 0.5 37.68 ? N06 WJB 401 A 1 HETATM 21 N N13 WJB . A . C 2 10.242 20.405 26.856 0.5 32.73 ? N13 WJB 401 A 1 HETATM 22 N N18 WJB . A . C 2 5.598 21.889 24.351 0.5 33.72 ? N18 WJB 401 A 1 HETATM 23 O O04 WJB . A . C 2 10.959 25.565 25.523 0.5 43.22 ? O04 WJB 401 A 1 HETATM 24 O O21 WJB . A . C 2 6.809 20.262 23.295 0.5 29.59 ? O21 WJB 401 A 1 HETATM 25 O O23 WJB . A . C 2 9.866 18.715 29.06 0.5 40.23 ? O23 WJB 401 A 1 HETATM 26 O O24 WJB . A . C 2 10.009 22.463 27.809 0.5 35.08 ? O24 WJB 401 A 1 HETATM 27 O O25 WJB . A . C 2 10.676 23.529 24.562 0.5 38.2 ? O25 WJB 401 A 1 HETATM 28 O O34 WJB . A . C 2 9.033 27.319 22.809 0.5 62 ? O34 WJB 401 A 1 HETATM 29 O O35 WJB . A . C 2 11.02 28.548 22.106 0.5 59.53 ? O35 WJB 401 A 1 HETATM 30 S S27 WJB . A . C 2 9.959 28.373 23.033 0.5 75.21 ? S27 WJB 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 30 #