data_8E5Z # _model_server_result.job_id OoO3IMST1JgP6uSUi5qiVw _model_server_result.datetime_utc '2024-11-19 12:25:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e5z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 8E5Z # _exptl.entry_id 8E5Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 591.695 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description '(1S,2S)-2-[(N-{[2-(benzenesulfonyl)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.22 _cell.angle_gamma 90 _cell.entry_id 8E5Z _cell.length_a 54.687 _cell.length_b 98.352 _cell.length_c 58.334 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E5Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 149 A CYS 145 1_555 C C22 WJB . A WJB 401 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.805 ? covale ? covale2 A SG CYS 149 A CYS 145 1_555 D C22 UQO . A UQO 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.821 ? covale ? covale3 B SG CYS 149 B CYS 145 1_555 E C22 WJB . B WJB 401 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.79 ? covale ? covale4 B SG CYS 149 B CYS 145 1_555 F C22 UQO . B UQO 402 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.806 ? # _chem_comp.formula 'C24 H37 N3 O10 S2' _chem_comp.formula_weight 591.695 _chem_comp.id UQO _chem_comp.mon_nstd_flag . _chem_comp.name '(1S,2S)-2-[(N-{[2-(benzenesulfonyl)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C32 C31 UQO doub 358 n y C32 C33 UQO sing 359 n y C31 C30 UQO sing 360 n y C33 C28 UQO doub 361 n y C30 C29 UQO doub 362 n y C28 C29 UQO sing 363 n y C28 S27 UQO sing 364 n n O35 S27 UQO doub 365 n n C01 C02 UQO sing 366 n n S27 C02 UQO sing 367 n n S27 O34 UQO doub 368 n n C02 C03 UQO sing 369 n n C02 C26 UQO sing 370 n n C03 O04 UQO sing 371 n n O04 C05 UQO sing 372 n n C05 N06 UQO sing 373 n n C05 O25 UQO doub 374 n n C19 C20 UQO sing 375 n n C19 N18 UQO sing 376 n n N06 C07 UQO sing 377 n n C20 C16 UQO sing 378 n n O24 C12 UQO doub 379 n n N18 C17 UQO sing 380 n n C07 C12 UQO sing 381 n n C07 C08 UQO sing 382 n n C12 N13 UQO sing 383 n n C16 C17 UQO sing 384 n n C16 C15 UQO sing 385 n n C17 O21 UQO doub 386 n n C08 C09 UQO sing 387 n n C09 C10 UQO sing 388 n n C09 C11 UQO sing 389 n n N13 C14 UQO sing 390 n n C14 C15 UQO sing 391 n n C14 C22 UQO sing 392 n n O23 C22 UQO sing 393 n n C07 H1 UQO sing 394 n n C08 H2 UQO sing 395 n n C08 H3 UQO sing 396 n n C09 H4 UQO sing 397 n n C10 H5 UQO sing 398 n n C10 H6 UQO sing 399 n n C10 H7 UQO sing 400 n n C14 H8 UQO sing 401 n n C15 H9 UQO sing 402 n n C15 H10 UQO sing 403 n n C16 H11 UQO sing 404 n n C19 H12 UQO sing 405 n n C19 H13 UQO sing 406 n n C20 H14 UQO sing 407 n n C20 H15 UQO sing 408 n n C22 H17 UQO sing 409 n n C26 H18 UQO sing 410 n n C26 H19 UQO sing 411 n n C26 H20 UQO sing 412 n n C30 H21 UQO sing 413 n n C01 H22 UQO sing 414 n n C01 H23 UQO sing 415 n n C01 H24 UQO sing 416 n n C03 H25 UQO sing 417 n n C03 H26 UQO sing 418 n n C11 H27 UQO sing 419 n n C11 H28 UQO sing 420 n n C11 H29 UQO sing 421 n n C29 H30 UQO sing 422 n n C31 H31 UQO sing 423 n n C32 H32 UQO sing 424 n n C33 H33 UQO sing 425 n n N06 H34 UQO sing 426 n n N13 H35 UQO sing 427 n n N18 H36 UQO sing 428 n n O23 H37 UQO sing 429 n n C22 S1 UQO sing 430 n n S1 O1 UQO doub 431 n n S1 O2 UQO doub 432 n n S1 O3 UQO sing 433 n n O3 H16 UQO sing 434 n n # _atom_sites.entry_id 8E5Z _atom_sites.fract_transf_matrix[1][1] 0.018286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005667 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WJB A 1 401 401 WJB WJB . D 3 UQO A 1 402 402 UQO UQO . E 2 WJB B 1 401 401 WJB WJB . F 3 UQO B 1 402 402 UQO UQO . G 4 HOH A 1 501 501 HOH HOH . G 4 HOH A 2 502 502 HOH HOH . G 4 HOH A 3 503 503 HOH HOH . G 4 HOH A 4 504 504 HOH HOH . G 4 HOH A 5 505 505 HOH HOH . G 4 HOH A 6 506 506 HOH HOH . G 4 HOH A 7 507 507 HOH HOH . G 4 HOH A 8 508 508 HOH HOH . G 4 HOH A 9 509 509 HOH HOH . G 4 HOH A 10 510 510 HOH HOH . G 4 HOH A 11 511 511 HOH HOH . G 4 HOH A 12 512 512 HOH HOH . G 4 HOH A 13 513 513 HOH HOH . G 4 HOH A 14 514 514 HOH HOH . G 4 HOH A 15 515 515 HOH HOH . G 4 HOH A 16 516 516 HOH HOH . G 4 HOH A 17 517 517 HOH HOH . G 4 HOH A 18 518 518 HOH HOH . G 4 HOH A 19 519 519 HOH HOH . G 4 HOH A 20 520 520 HOH HOH . G 4 HOH A 21 521 521 HOH HOH . G 4 HOH A 22 522 522 HOH HOH . G 4 HOH A 23 523 523 HOH HOH . G 4 HOH A 24 524 524 HOH HOH . G 4 HOH A 25 525 525 HOH HOH . G 4 HOH A 26 526 526 HOH HOH . G 4 HOH A 27 527 527 HOH HOH . G 4 HOH A 28 528 528 HOH HOH . G 4 HOH A 29 529 529 HOH HOH . G 4 HOH A 30 530 530 HOH HOH . G 4 HOH A 31 531 531 HOH HOH . G 4 HOH A 32 532 532 HOH HOH . G 4 HOH A 33 533 533 HOH HOH . G 4 HOH A 34 534 534 HOH HOH . G 4 HOH A 35 535 535 HOH HOH . G 4 HOH A 36 536 536 HOH HOH . G 4 HOH A 37 537 537 HOH HOH . G 4 HOH A 38 538 538 HOH HOH . G 4 HOH A 39 539 539 HOH HOH . G 4 HOH A 40 540 540 HOH HOH . G 4 HOH A 41 541 541 HOH HOH . G 4 HOH A 42 542 542 HOH HOH . G 4 HOH A 43 543 543 HOH HOH . G 4 HOH A 44 544 544 HOH HOH . G 4 HOH A 45 545 545 HOH HOH . G 4 HOH A 46 546 546 HOH HOH . G 4 HOH A 47 547 547 HOH HOH . G 4 HOH A 48 548 548 HOH HOH . G 4 HOH A 49 549 549 HOH HOH . G 4 HOH A 50 550 550 HOH HOH . G 4 HOH A 51 551 551 HOH HOH . G 4 HOH A 52 552 552 HOH HOH . G 4 HOH A 53 553 553 HOH HOH . G 4 HOH A 54 554 554 HOH HOH . G 4 HOH A 55 555 555 HOH HOH . G 4 HOH A 56 556 556 HOH HOH . G 4 HOH A 57 557 557 HOH HOH . G 4 HOH A 58 558 558 HOH HOH . G 4 HOH A 59 559 559 HOH HOH . G 4 HOH A 60 560 560 HOH HOH . G 4 HOH A 61 561 561 HOH HOH . G 4 HOH A 62 562 562 HOH HOH . G 4 HOH A 63 563 563 HOH HOH . G 4 HOH A 64 564 564 HOH HOH . G 4 HOH A 65 565 565 HOH HOH . G 4 HOH A 66 566 566 HOH HOH . G 4 HOH A 67 567 567 HOH HOH . G 4 HOH A 68 568 568 HOH HOH . G 4 HOH A 69 569 569 HOH HOH . G 4 HOH A 70 570 570 HOH HOH . G 4 HOH A 71 571 571 HOH HOH . G 4 HOH A 72 572 572 HOH HOH . H 4 HOH B 1 501 501 HOH HOH . H 4 HOH B 2 502 502 HOH HOH . H 4 HOH B 3 503 503 HOH HOH . H 4 HOH B 4 504 504 HOH HOH . H 4 HOH B 5 505 505 HOH HOH . H 4 HOH B 6 506 506 HOH HOH . H 4 HOH B 7 507 507 HOH HOH . H 4 HOH B 8 508 508 HOH HOH . H 4 HOH B 9 509 509 HOH HOH . H 4 HOH B 10 510 510 HOH HOH . H 4 HOH B 11 511 511 HOH HOH . H 4 HOH B 12 512 512 HOH HOH . H 4 HOH B 13 513 513 HOH HOH . H 4 HOH B 14 514 514 HOH HOH . H 4 HOH B 15 515 515 HOH HOH . H 4 HOH B 16 516 516 HOH HOH . H 4 HOH B 17 517 517 HOH HOH . H 4 HOH B 18 518 518 HOH HOH . H 4 HOH B 19 519 519 HOH HOH . H 4 HOH B 20 520 520 HOH HOH . H 4 HOH B 21 521 521 HOH HOH . H 4 HOH B 22 522 522 HOH HOH . H 4 HOH B 23 523 523 HOH HOH . H 4 HOH B 24 524 524 HOH HOH . H 4 HOH B 25 525 525 HOH HOH . H 4 HOH B 26 526 526 HOH HOH . H 4 HOH B 27 527 527 HOH HOH . H 4 HOH B 28 528 528 HOH HOH . H 4 HOH B 29 529 529 HOH HOH . H 4 HOH B 30 530 530 HOH HOH . H 4 HOH B 31 531 531 HOH HOH . H 4 HOH B 32 532 532 HOH HOH . H 4 HOH B 33 533 533 HOH HOH . H 4 HOH B 34 534 534 HOH HOH . H 4 HOH B 35 535 535 HOH HOH . H 4 HOH B 36 536 536 HOH HOH . H 4 HOH B 37 537 537 HOH HOH . H 4 HOH B 38 538 538 HOH HOH . H 4 HOH B 39 539 539 HOH HOH . H 4 HOH B 40 540 540 HOH HOH . H 4 HOH B 41 541 541 HOH HOH . H 4 HOH B 42 542 542 HOH HOH . H 4 HOH B 43 543 543 HOH HOH . H 4 HOH B 44 544 544 HOH HOH . H 4 HOH B 45 545 545 HOH HOH . H 4 HOH B 46 546 546 HOH HOH . H 4 HOH B 47 547 547 HOH HOH . H 4 HOH B 48 548 548 HOH HOH . H 4 HOH B 49 549 549 HOH HOH . H 4 HOH B 50 550 550 HOH HOH . H 4 HOH B 51 551 551 HOH HOH . H 4 HOH B 52 552 552 HOH HOH . H 4 HOH B 53 553 553 HOH HOH . H 4 HOH B 54 554 554 HOH HOH . H 4 HOH B 55 555 555 HOH HOH . H 4 HOH B 56 556 556 HOH HOH . H 4 HOH B 57 557 557 HOH HOH . H 4 HOH B 58 558 558 HOH HOH . H 4 HOH B 59 559 559 HOH HOH . H 4 HOH B 60 560 560 HOH HOH . H 4 HOH B 61 561 561 HOH HOH . H 4 HOH B 62 562 562 HOH HOH . H 4 HOH B 63 563 563 HOH HOH . H 4 HOH B 64 564 564 HOH HOH . H 4 HOH B 65 565 565 HOH HOH . H 4 HOH B 66 566 566 HOH HOH . H 4 HOH B 67 567 567 HOH HOH . H 4 HOH B 68 568 568 HOH HOH . H 4 HOH B 69 569 569 HOH HOH . H 4 HOH B 70 570 570 HOH HOH . H 4 HOH B 71 571 571 HOH HOH . H 4 HOH B 72 572 572 HOH HOH . H 4 HOH B 73 573 573 HOH HOH . H 4 HOH B 74 574 574 HOH HOH . H 4 HOH B 75 575 575 HOH HOH . H 4 HOH B 76 576 576 HOH HOH . H 4 HOH B 77 577 577 HOH HOH . H 4 HOH B 78 578 578 HOH HOH . H 4 HOH B 79 579 579 HOH HOH . H 4 HOH B 80 580 580 HOH HOH . H 4 HOH B 81 581 581 HOH HOH . H 4 HOH B 82 582 582 HOH HOH . H 4 HOH B 83 583 583 HOH HOH . H 4 HOH B 84 584 584 HOH HOH . H 4 HOH B 85 585 585 HOH HOH . H 4 HOH B 86 586 586 HOH HOH . H 4 HOH B 87 587 587 HOH HOH . H 4 HOH B 88 588 588 HOH HOH . H 4 HOH B 89 589 589 HOH HOH . H 4 HOH B 90 590 590 HOH HOH . H 4 HOH B 91 591 591 HOH HOH . H 4 HOH B 92 592 592 HOH HOH . H 4 HOH B 93 593 593 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 UQO . B . D 3 10.153 28.024 24.204 0.5 61.4 ? C02 UQO 402 A 1 HETATM 2 C C05 UQO . B . D 3 11.183 24.351 25.329 0.5 44.65 ? C05 UQO 402 A 1 HETATM 3 C C07 UQO . B . D 3 12.119 22.362 26.595 0.5 39.81 ? C07 UQO 402 A 1 HETATM 4 C C08 UQO . B . D 3 13.238 22.085 27.654 0.5 38.22 ? C08 UQO 402 A 1 HETATM 5 C C09 UQO . B . D 3 14.65 22.518 27.229 0.5 40.9 ? C09 UQO 402 A 1 HETATM 6 C C10 UQO . B . D 3 15.727 22.181 28.275 0.5 43.01 ? C10 UQO 402 A 1 HETATM 7 C C12 UQO . B . D 3 10.762 21.808 27.117 0.5 38.21 ? C12 UQO 402 A 1 HETATM 8 C C14 UQO . B . D 3 9.063 19.984 27.278 0.5 34.52 ? C14 UQO 402 A 1 HETATM 9 C C15 UQO . B . D 3 8.035 19.776 26.115 0.5 30.84 ? C15 UQO 402 A 1 HETATM 10 C C16 UQO . B . D 3 7.561 21.101 25.494 0.5 33.55 ? C16 UQO 402 A 1 HETATM 11 C C17 UQO . B . D 3 6.647 20.926 24.289 0.5 32.59 ? C17 UQO 402 A 1 HETATM 12 C C19 UQO . B . D 3 5.595 22.576 25.673 0.5 33.62 ? C19 UQO 402 A 1 HETATM 13 C C20 UQO . B . D 3 6.763 21.987 26.485 0.5 33.96 ? C20 UQO 402 A 1 HETATM 14 C C22 UQO . B . D 3 9.345 18.633 27.951 0.5 29.44 ? C22 UQO 402 A 1 HETATM 15 C C26 UQO . B . D 3 11.248 29.036 23.85 0.5 62.12 ? C26 UQO 402 A 1 HETATM 16 C C28 UQO . B . D 3 8.001 29.972 23.43 0.5 62.39 ? C28 UQO 402 A 1 HETATM 17 C C01 UQO . B . D 3 9.706 28.278 25.629 0.5 55.6 ? C01 UQO 402 A 1 HETATM 18 C C03 UQO . B . D 3 10.845 26.552 24.143 0.5 52.7 ? C03 UQO 402 A 1 HETATM 19 C C11 UQO . B . D 3 15.057 21.879 25.899 0.5 42.51 ? C11 UQO 402 A 1 HETATM 20 N N06 UQO . B . D 3 12.043 23.817 26.305 0.5 37.51 ? N06 UQO 402 A 1 HETATM 21 N N13 UQO . B . D 3 10.331 20.513 26.817 0.5 32.92 ? N13 UQO 402 A 1 HETATM 22 N N18 UQO . B . D 3 5.559 21.778 24.43 0.5 33.76 ? N18 UQO 402 A 1 HETATM 23 O O04 UQO . B . D 3 10.931 25.729 25.353 0.5 43.66 ? O04 UQO 402 A 1 HETATM 24 O O21 UQO . B . D 3 6.803 20.203 23.334 0.5 29.61 ? O21 UQO 402 A 1 HETATM 25 O O23 UQO . B . D 3 8.079 18.16 28.368 0.5 21.71 ? O23 UQO 402 A 1 HETATM 26 O O24 UQO . B . D 3 10.043 22.536 27.807 0.5 35.08 ? O24 UQO 402 A 1 HETATM 27 O O25 UQO . B . D 3 10.647 23.633 24.482 0.5 38.25 ? O25 UQO 402 A 1 HETATM 28 O O34 UQO . B . D 3 7.721 27.427 23.277 0.5 67.82 ? O34 UQO 402 A 1 HETATM 29 O O35 UQO . B . D 3 9.204 28.542 21.72 0.5 61.08 ? O35 UQO 402 A 1 HETATM 30 S S27 UQO . B . D 3 8.695 28.431 23.043 0.5 79.71 ? S27 UQO 402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 30 #