data_8E65 # _model_server_result.job_id GOwzFlBM6fpAkIgOxai8GQ _model_server_result.datetime_utc '2024-11-05 09:23:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e65 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8E65 # _exptl.entry_id 8E65 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 578.075 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S,2S)-2-[(N-{[2-(4-chlorophenoxy)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.34 _cell.angle_gamma 90 _cell.entry_id 8E65 _cell.length_a 114.075 _cell.length_b 53.35 _cell.length_c 45.944 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E65 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 149 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 145 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C31 _struct_conn.ptnr2_label_comp_id WF5 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id WF5 _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.808 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H36 Cl N3 O9 S' _chem_comp.formula_weight 578.075 _chem_comp.id WF5 _chem_comp.mon_nstd_flag . _chem_comp.name '(1S,2S)-2-[(N-{[2-(4-chlorophenoxy)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O30 C26 WF5 doub 376 n n C26 N27 WF5 sing 377 n n C26 C25 WF5 sing 378 n n S2 C31 WF5 sing 379 n n N27 C28 WF5 sing 380 n n C24 C25 WF5 sing 381 n n C24 C23 WF5 sing 382 n n C25 C29 WF5 sing 383 n n O32 C31 WF5 sing 384 n n C31 C23 WF5 sing 385 n n C23 N22 WF5 sing 386 n n C28 C29 WF5 sing 387 n n N22 C21 WF5 sing 388 n n O34 C14 WF5 doub 389 n n C21 C16 WF5 sing 390 n n C21 O33 WF5 doub 391 n n C16 N15 WF5 sing 392 n n C16 C17 WF5 sing 393 n n C14 N15 WF5 sing 394 n n C14 O13 WF5 sing 395 n n C20 C18 WF5 sing 396 n n C12 O13 WF5 sing 397 n n C12 C09 WF5 sing 398 n n C11 C09 WF5 sing 399 n n O08 C09 WF5 sing 400 n n O08 C07 WF5 sing 401 n n C17 C18 WF5 sing 402 n n C09 C10 WF5 sing 403 n n C04 C07 WF5 doub 404 n y C04 C03 WF5 sing 405 n y C18 C19 WF5 sing 406 n n C07 C06 WF5 sing 407 n y C03 C02 WF5 doub 408 n y C06 C05 WF5 doub 409 n y C02 C05 WF5 sing 410 n y C02 CL01 WF5 sing 411 n n C04 H1 WF5 sing 412 n n C05 H2 WF5 sing 413 n n C06 H3 WF5 sing 414 n n C10 H4 WF5 sing 415 n n C10 H5 WF5 sing 416 n n C10 H6 WF5 sing 417 n n C11 H7 WF5 sing 418 n n C11 H8 WF5 sing 419 n n C11 H9 WF5 sing 420 n n C12 H10 WF5 sing 421 n n C12 H11 WF5 sing 422 n n C16 H12 WF5 sing 423 n n C18 H13 WF5 sing 424 n n C19 H14 WF5 sing 425 n n C19 H15 WF5 sing 426 n n C19 H16 WF5 sing 427 n n C20 H17 WF5 sing 428 n n C20 H18 WF5 sing 429 n n C20 H19 WF5 sing 430 n n C23 H20 WF5 sing 431 n n C24 H21 WF5 sing 432 n n C24 H22 WF5 sing 433 n n C29 H23 WF5 sing 434 n n C29 H24 WF5 sing 435 n n C31 H25 WF5 sing 436 n n C03 H26 WF5 sing 437 n n C17 H27 WF5 sing 438 n n C17 H28 WF5 sing 439 n n C25 H29 WF5 sing 440 n n C28 H30 WF5 sing 441 n n C28 H31 WF5 sing 442 n n N15 H32 WF5 sing 443 n n N22 H33 WF5 sing 444 n n N27 H34 WF5 sing 445 n n O32 H35 WF5 sing 446 n n S2 O1 WF5 doub 447 n n S2 O2 WF5 sing 448 n n S2 O3 WF5 doub 449 n n O2 H36 WF5 sing 450 n n # _atom_sites.entry_id 8E65 _atom_sites.fract_transf_matrix[1][1] 0.008766 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001918 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WF5 A 1 401 401 WF5 WF5 . C 3 HOH A 1 501 501 HOH HOH . C 3 HOH A 2 502 502 HOH HOH . C 3 HOH A 3 503 503 HOH HOH . C 3 HOH A 4 504 504 HOH HOH . C 3 HOH A 5 505 505 HOH HOH . C 3 HOH A 6 506 506 HOH HOH . C 3 HOH A 7 507 507 HOH HOH . C 3 HOH A 8 508 508 HOH HOH . C 3 HOH A 9 509 509 HOH HOH . C 3 HOH A 10 510 510 HOH HOH . C 3 HOH A 11 511 511 HOH HOH . C 3 HOH A 12 512 512 HOH HOH . C 3 HOH A 13 513 513 HOH HOH . C 3 HOH A 14 514 514 HOH HOH . C 3 HOH A 15 515 515 HOH HOH . C 3 HOH A 16 516 516 HOH HOH . C 3 HOH A 17 517 517 HOH HOH . C 3 HOH A 18 518 518 HOH HOH . C 3 HOH A 19 519 519 HOH HOH . C 3 HOH A 20 520 520 HOH HOH . C 3 HOH A 21 521 521 HOH HOH . C 3 HOH A 22 522 522 HOH HOH . C 3 HOH A 23 523 523 HOH HOH . C 3 HOH A 24 524 524 HOH HOH . C 3 HOH A 25 525 525 HOH HOH . C 3 HOH A 26 526 526 HOH HOH . C 3 HOH A 27 527 527 HOH HOH . C 3 HOH A 28 528 528 HOH HOH . C 3 HOH A 29 529 529 HOH HOH . C 3 HOH A 30 530 530 HOH HOH . C 3 HOH A 31 531 531 HOH HOH . C 3 HOH A 32 532 532 HOH HOH . C 3 HOH A 33 533 533 HOH HOH . C 3 HOH A 34 534 534 HOH HOH . C 3 HOH A 35 535 535 HOH HOH . C 3 HOH A 36 536 536 HOH HOH . C 3 HOH A 37 537 537 HOH HOH . C 3 HOH A 38 538 538 HOH HOH . C 3 HOH A 39 539 539 HOH HOH . C 3 HOH A 40 540 540 HOH HOH . C 3 HOH A 41 541 541 HOH HOH . C 3 HOH A 42 542 542 HOH HOH . C 3 HOH A 43 543 543 HOH HOH . C 3 HOH A 44 544 544 HOH HOH . C 3 HOH A 45 545 545 HOH HOH . C 3 HOH A 46 546 546 HOH HOH . C 3 HOH A 47 547 547 HOH HOH . C 3 HOH A 48 548 548 HOH HOH . C 3 HOH A 49 549 549 HOH HOH . C 3 HOH A 50 550 550 HOH HOH . C 3 HOH A 51 551 551 HOH HOH . C 3 HOH A 52 552 552 HOH HOH . C 3 HOH A 53 553 553 HOH HOH . C 3 HOH A 54 554 554 HOH HOH . C 3 HOH A 55 555 555 HOH HOH . C 3 HOH A 56 556 556 HOH HOH . C 3 HOH A 57 557 557 HOH HOH . C 3 HOH A 58 558 558 HOH HOH . C 3 HOH A 59 559 559 HOH HOH . C 3 HOH A 60 560 560 HOH HOH . C 3 HOH A 61 561 561 HOH HOH . C 3 HOH A 62 562 562 HOH HOH . C 3 HOH A 63 563 563 HOH HOH . C 3 HOH A 64 564 564 HOH HOH . C 3 HOH A 65 565 565 HOH HOH . C 3 HOH A 66 566 566 HOH HOH . C 3 HOH A 67 567 567 HOH HOH . C 3 HOH A 68 568 568 HOH HOH . C 3 HOH A 69 569 569 HOH HOH . C 3 HOH A 70 570 570 HOH HOH . C 3 HOH A 71 571 571 HOH HOH . C 3 HOH A 72 572 572 HOH HOH . C 3 HOH A 73 573 573 HOH HOH . C 3 HOH A 74 574 574 HOH HOH . C 3 HOH A 75 575 575 HOH HOH . C 3 HOH A 76 576 576 HOH HOH . C 3 HOH A 77 577 577 HOH HOH . C 3 HOH A 78 578 578 HOH HOH . C 3 HOH A 79 579 579 HOH HOH . C 3 HOH A 80 580 580 HOH HOH . C 3 HOH A 81 581 581 HOH HOH . C 3 HOH A 82 582 582 HOH HOH . C 3 HOH A 83 583 583 HOH HOH . C 3 HOH A 84 584 584 HOH HOH . C 3 HOH A 85 585 585 HOH HOH . C 3 HOH A 86 586 586 HOH HOH . C 3 HOH A 87 587 587 HOH HOH . C 3 HOH A 88 588 588 HOH HOH . C 3 HOH A 89 589 589 HOH HOH . C 3 HOH A 90 590 590 HOH HOH . C 3 HOH A 91 591 591 HOH HOH . C 3 HOH A 92 592 592 HOH HOH . C 3 HOH A 93 593 593 HOH HOH . C 3 HOH A 94 594 594 HOH HOH . C 3 HOH A 95 595 595 HOH HOH . C 3 HOH A 96 596 596 HOH HOH . C 3 HOH A 97 597 597 HOH HOH . C 3 HOH A 98 598 598 HOH HOH . C 3 HOH A 99 599 599 HOH HOH . C 3 HOH A 100 600 600 HOH HOH . C 3 HOH A 101 601 601 HOH HOH . C 3 HOH A 102 602 602 HOH HOH . C 3 HOH A 103 603 603 HOH HOH . C 3 HOH A 104 604 604 HOH HOH . C 3 HOH A 105 605 605 HOH HOH . C 3 HOH A 106 606 606 HOH HOH . C 3 HOH A 107 607 607 HOH HOH . C 3 HOH A 108 608 608 HOH HOH . C 3 HOH A 109 609 609 HOH HOH . C 3 HOH A 110 610 610 HOH HOH . C 3 HOH A 111 611 611 HOH HOH . C 3 HOH A 112 612 612 HOH HOH . C 3 HOH A 113 613 613 HOH HOH . C 3 HOH A 114 614 614 HOH HOH . C 3 HOH A 115 615 615 HOH HOH . C 3 HOH A 116 616 616 HOH HOH . C 3 HOH A 117 617 617 HOH HOH . C 3 HOH A 118 618 618 HOH HOH . C 3 HOH A 119 619 619 HOH HOH . C 3 HOH A 120 620 620 HOH HOH . C 3 HOH A 121 621 621 HOH HOH . C 3 HOH A 122 622 622 HOH HOH . C 3 HOH A 123 623 623 HOH HOH . C 3 HOH A 124 624 624 HOH HOH . C 3 HOH A 125 625 625 HOH HOH . C 3 HOH A 126 626 626 HOH HOH . C 3 HOH A 127 627 627 HOH HOH . C 3 HOH A 128 628 628 HOH HOH . C 3 HOH A 129 629 629 HOH HOH . C 3 HOH A 130 630 630 HOH HOH . C 3 HOH A 131 631 631 HOH HOH . C 3 HOH A 132 632 632 HOH HOH . C 3 HOH A 133 633 633 HOH HOH . C 3 HOH A 134 634 634 HOH HOH . C 3 HOH A 135 635 635 HOH HOH . C 3 HOH A 136 636 636 HOH HOH . C 3 HOH A 137 637 637 HOH HOH . C 3 HOH A 138 638 638 HOH HOH . C 3 HOH A 139 639 639 HOH HOH . C 3 HOH A 140 640 640 HOH HOH . C 3 HOH A 141 641 641 HOH HOH . C 3 HOH A 142 642 642 HOH HOH . C 3 HOH A 143 643 643 HOH HOH . C 3 HOH A 144 644 644 HOH HOH . C 3 HOH A 145 645 645 HOH HOH . C 3 HOH A 146 646 646 HOH HOH . C 3 HOH A 147 647 647 HOH HOH . C 3 HOH A 148 648 648 HOH HOH . C 3 HOH A 149 649 649 HOH HOH . C 3 HOH A 150 650 650 HOH HOH . C 3 HOH A 151 651 651 HOH HOH . C 3 HOH A 152 652 652 HOH HOH . C 3 HOH A 153 653 653 HOH HOH . C 3 HOH A 154 654 654 HOH HOH . C 3 HOH A 155 655 655 HOH HOH . C 3 HOH A 156 656 656 HOH HOH . C 3 HOH A 157 657 657 HOH HOH . C 3 HOH A 158 658 658 HOH HOH . C 3 HOH A 159 659 659 HOH HOH . C 3 HOH A 160 660 660 HOH HOH . C 3 HOH A 161 661 661 HOH HOH . C 3 HOH A 162 662 662 HOH HOH . C 3 HOH A 163 663 663 HOH HOH . C 3 HOH A 164 664 664 HOH HOH . C 3 HOH A 165 665 665 HOH HOH . C 3 HOH A 166 666 666 HOH HOH . C 3 HOH A 167 667 667 HOH HOH . C 3 HOH A 168 668 668 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 WF5 . . . B 2 4.764 6.675 25.001 1 57.89 ? C02 WF5 401 A 1 HETATM 2 C C04 WF5 . . . B 2 5.286 8.347 23.262 1 41.9 ? C04 WF5 401 A 1 HETATM 3 C C05 WF5 . . . B 2 6.116 6.291 25.055 1 46.91 ? C05 WF5 401 A 1 HETATM 4 C C06 WF5 . . . B 2 7.06 6.932 24.22 1 37.47 ? C06 WF5 401 A 1 HETATM 5 C C07 WF5 . . . B 2 6.64 7.974 23.337 1 36.81 ? C07 WF5 401 A 1 HETATM 6 C C10 WF5 . . . B 2 8.436 9.89 24.471 1 33.56 ? C10 WF5 401 A 1 HETATM 7 C C11 WF5 . . . B 2 7.628 11.121 22.424 1 37.19 ? C11 WF5 401 A 1 HETATM 8 C C12 WF5 . . . B 2 9.758 9.705 22.291 1 25.9 ? C12 WF5 401 A 1 HETATM 9 C C14 WF5 . . . B 2 10.322 7.322 22.081 1 25.96 ? C14 WF5 401 A 1 HETATM 10 C C16 WF5 . . . B 2 10.811 4.882 22.051 1 19.41 ? C16 WF5 401 A 1 HETATM 11 C C18 WF5 . . . B 2 12.918 4.269 23.33 1 25.95 ? C18 WF5 401 A 1 HETATM 12 C C19 WF5 . . . B 2 13.569 3.171 24.201 1 29.81 ? C19 WF5 401 A 1 HETATM 13 C C20 WF5 . . . B 2 13.781 4.576 22.106 1 25.64 ? C20 WF5 401 A 1 HETATM 14 C C23 WF5 . . . B 2 7.825 3.489 19.976 1 19.51 ? C23 WF5 401 A 1 HETATM 15 C C24 WF5 . . . B 2 7.386 4.44 18.788 1 15.89 ? C24 WF5 401 A 1 HETATM 16 C C26 WF5 . . . B 2 6.793 6.626 18.003 1 19.21 ? C26 WF5 401 A 1 HETATM 17 C C29 WF5 . . . B 2 5.93 6.109 20.19 1 23.54 ? C29 WF5 401 A 1 HETATM 18 C C31 WF5 . . . B 2 7.952 1.974 19.638 1 21.11 ? C31 WF5 401 A 1 HETATM 19 O O33 WF5 . . . B 2 8.481 4.537 22.487 1 21 ? O33 WF5 401 A 1 HETATM 20 O O34 WF5 . . . B 2 10.085 7.353 20.908 1 20.06 ? O34 WF5 401 A 1 HETATM 21 C C03 WF5 . . . B 2 4.345 7.702 24.097 1 48.56 ? C03 WF5 401 A 1 HETATM 22 C C09 WF5 . . . B 2 8.297 9.845 22.92 1 38.35 ? C09 WF5 401 A 1 HETATM 23 C C17 WF5 . . . B 2 11.486 3.822 22.84 1 20.45 ? C17 WF5 401 A 1 HETATM 24 C C21 WF5 . . . B 2 9.386 4.447 21.703 1 25.49 ? C21 WF5 401 A 1 HETATM 25 C C25 WF5 . . . B 2 7.169 5.95 19.098 1 19.11 ? C25 WF5 401 A 1 HETATM 26 C C28 WF5 . . . B 2 5.407 7.315 19.98 1 25.15 ? C28 WF5 401 A 1 HETATM 27 N N15 WF5 . . . B 2 10.676 6.101 22.808 1 20.16 ? N15 WF5 401 A 1 HETATM 28 N N22 WF5 . . . B 2 9.147 3.903 20.353 1 19.13 ? N22 WF5 401 A 1 HETATM 29 N N27 WF5 . . . B 2 5.605 7.584 18.441 1 21.02 ? N27 WF5 401 A 1 HETATM 30 O O08 WF5 . . . B 2 7.599 8.634 22.455 1 38.55 ? O08 WF5 401 A 1 HETATM 31 O O13 WF5 . . . B 2 10.266 8.533 22.889 1 22.03 ? O13 WF5 401 A 1 HETATM 32 O O30 WF5 . . . B 2 7.233 6.547 16.866 1 21.68 ? O30 WF5 401 A 1 HETATM 33 O O32 WF5 . . . B 2 6.694 1.338 19.32 1 20.99 ? O32 WF5 401 A 1 HETATM 34 CL CL01 WF5 . . . B 2 3.575 5.863 26.057 1 70.21 ? CL01 WF5 401 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 34 #