data_8E69 # _model_server_result.job_id KZMvBHl_QW8ugYyUc9tq1g _model_server_result.datetime_utc '2025-01-29 02:57:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 8E69 # _exptl.entry_id 8E69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 561.621 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R,2S)-2-[(N-{[2-(3-fluorophenoxy)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.49 _cell.angle_gamma 90 _cell.entry_id 8E69 _cell.length_a 46.213 _cell.length_b 53.766 _cell.length_c 113.892 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 149 A CYS 145 1_555 C C22 WIO . A WIO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? covale ? covale2 B SG CYS 149 B CYS 145 1_555 D C22 WIO . B WIO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.784 ? # _chem_comp.formula 'C24 H36 F N3 O9 S' _chem_comp.formula_weight 561.621 _chem_comp.id WIO _chem_comp.mon_nstd_flag . _chem_comp.name '(1R,2S)-2-[(N-{[2-(3-fluorophenoxy)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N18 C19 WIO sing 376 n n N18 C17 WIO sing 377 n n C19 C20 WIO sing 378 n n C20 C16 WIO sing 379 n n C17 O21 WIO doub 380 n n C17 C16 WIO sing 381 n n C16 C15 WIO sing 382 n n C15 C14 WIO sing 383 n n O23 C22 WIO sing 384 n n C22 C14 WIO sing 385 n n C22 S2 WIO sing 386 n n C14 N13 WIO sing 387 n n O24 C12 WIO doub 388 n n N13 C12 WIO sing 389 n n C26 C02 WIO sing 390 n n C12 C07 WIO sing 391 n n C03 C02 WIO sing 392 n n C03 O04 WIO sing 393 n n C01 C02 WIO sing 394 n n C02 O27 WIO sing 395 n n O25 C05 WIO doub 396 n n O04 C05 WIO sing 397 n n C05 N06 WIO sing 398 n n C07 N06 WIO sing 399 n n C07 C08 WIO sing 400 n n O27 C28 WIO sing 401 n n C08 C09 WIO sing 402 n n C28 C34 WIO doub 403 n y C28 C29 WIO sing 404 n y C34 C32 WIO sing 405 n y C29 C30 WIO doub 406 n y C09 C11 WIO sing 407 n n C09 C10 WIO sing 408 n n C32 F33 WIO sing 409 n n C32 C31 WIO doub 410 n y C30 C31 WIO sing 411 n y C07 H1 WIO sing 412 n n C08 H2 WIO sing 413 n n C08 H3 WIO sing 414 n n C09 H4 WIO sing 415 n n C10 H5 WIO sing 416 n n C10 H6 WIO sing 417 n n C10 H7 WIO sing 418 n n C11 H8 WIO sing 419 n n C11 H9 WIO sing 420 n n C11 H10 WIO sing 421 n n C14 H11 WIO sing 422 n n C15 H12 WIO sing 423 n n C15 H13 WIO sing 424 n n C16 H14 WIO sing 425 n n C19 H15 WIO sing 426 n n C19 H16 WIO sing 427 n n C20 H17 WIO sing 428 n n C20 H18 WIO sing 429 n n C03 H19 WIO sing 430 n n C03 H20 WIO sing 431 n n C01 H21 WIO sing 432 n n C01 H22 WIO sing 433 n n C01 H23 WIO sing 434 n n C26 H24 WIO sing 435 n n C26 H25 WIO sing 436 n n C26 H26 WIO sing 437 n n C29 H27 WIO sing 438 n n C30 H28 WIO sing 439 n n C31 H29 WIO sing 440 n n C34 H30 WIO sing 441 n n N06 H31 WIO sing 442 n n N13 H32 WIO sing 443 n n N18 H33 WIO sing 444 n n S2 O1 WIO sing 445 n n S2 O2 WIO doub 446 n n S2 O3 WIO doub 447 n n C22 H35 WIO sing 448 n n O23 H36 WIO sing 449 n n O1 H34 WIO sing 450 n n # _atom_sites.entry_id 8E69 _atom_sites.fract_transf_matrix[1][1] 0.021639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004399 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018599 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00896 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 WIO A 1 401 1 WIO M88 . D 2 WIO B 1 401 2 WIO M88 . E 3 HOH A 1 501 33 HOH HOH . E 3 HOH A 2 502 49 HOH HOH . E 3 HOH A 3 503 12 HOH HOH . E 3 HOH A 4 504 3 HOH HOH . E 3 HOH A 5 505 34 HOH HOH . E 3 HOH A 6 506 4 HOH HOH . E 3 HOH A 7 507 46 HOH HOH . E 3 HOH A 8 508 38 HOH HOH . E 3 HOH A 9 509 29 HOH HOH . E 3 HOH A 10 510 61 HOH HOH . E 3 HOH A 11 511 53 HOH HOH . E 3 HOH A 12 512 67 HOH HOH . E 3 HOH A 13 513 54 HOH HOH . E 3 HOH A 14 514 19 HOH HOH . E 3 HOH A 15 515 30 HOH HOH . E 3 HOH A 16 516 7 HOH HOH . E 3 HOH A 17 517 20 HOH HOH . E 3 HOH A 18 518 74 HOH HOH . E 3 HOH A 19 519 43 HOH HOH . E 3 HOH A 20 520 65 HOH HOH . E 3 HOH A 21 521 32 HOH HOH . E 3 HOH A 22 522 48 HOH HOH . E 3 HOH A 23 523 72 HOH HOH . E 3 HOH A 24 524 59 HOH HOH . E 3 HOH A 25 525 16 HOH HOH . E 3 HOH A 26 526 62 HOH HOH . E 3 HOH A 27 527 39 HOH HOH . E 3 HOH A 28 528 60 HOH HOH . E 3 HOH A 29 529 21 HOH HOH . E 3 HOH A 30 530 22 HOH HOH . E 3 HOH A 31 531 25 HOH HOH . E 3 HOH A 32 532 42 HOH HOH . E 3 HOH A 33 533 37 HOH HOH . E 3 HOH A 34 534 56 HOH HOH . E 3 HOH A 35 535 24 HOH HOH . E 3 HOH A 36 536 2 HOH HOH . E 3 HOH A 37 537 14 HOH HOH . E 3 HOH A 38 538 1 HOH HOH . E 3 HOH A 39 539 13 HOH HOH . E 3 HOH A 40 540 57 HOH HOH . E 3 HOH A 41 541 69 HOH HOH . E 3 HOH A 42 542 71 HOH HOH . E 3 HOH A 43 543 64 HOH HOH . F 3 HOH B 1 501 15 HOH HOH . F 3 HOH B 2 502 41 HOH HOH . F 3 HOH B 3 503 55 HOH HOH . F 3 HOH B 4 504 45 HOH HOH . F 3 HOH B 5 505 18 HOH HOH . F 3 HOH B 6 506 52 HOH HOH . F 3 HOH B 7 507 27 HOH HOH . F 3 HOH B 8 508 11 HOH HOH . F 3 HOH B 9 509 5 HOH HOH . F 3 HOH B 10 510 23 HOH HOH . F 3 HOH B 11 511 36 HOH HOH . F 3 HOH B 12 512 28 HOH HOH . F 3 HOH B 13 513 63 HOH HOH . F 3 HOH B 14 514 10 HOH HOH . F 3 HOH B 15 515 73 HOH HOH . F 3 HOH B 16 516 51 HOH HOH . F 3 HOH B 17 517 17 HOH HOH . F 3 HOH B 18 518 66 HOH HOH . F 3 HOH B 19 519 75 HOH HOH . F 3 HOH B 20 520 8 HOH HOH . F 3 HOH B 21 521 44 HOH HOH . F 3 HOH B 22 522 35 HOH HOH . F 3 HOH B 23 523 70 HOH HOH . F 3 HOH B 24 524 26 HOH HOH . F 3 HOH B 25 525 9 HOH HOH . F 3 HOH B 26 526 40 HOH HOH . F 3 HOH B 27 527 6 HOH HOH . F 3 HOH B 28 528 50 HOH HOH . F 3 HOH B 29 529 58 HOH HOH . F 3 HOH B 30 530 68 HOH HOH . F 3 HOH B 31 531 31 HOH HOH . F 3 HOH B 32 532 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C07 WIO . . . D 2 25.497 -2.532 12.789 1 34.29 ? C07 WIO 401 B 1 HETATM 2 C C08 WIO . . . D 2 26.048 -3.577 11.793 1 33 ? C08 WIO 401 B 1 HETATM 3 C C09 WIO . . . D 2 26.293 -2.994 10.384 1 44.04 ? C09 WIO 401 B 1 HETATM 4 C C10 WIO . . . D 2 26.744 -4.066 9.363 1 48.57 ? C10 WIO 401 B 1 HETATM 5 C C11 WIO . . . D 2 25.046 -2.254 9.874 1 37.63 ? C11 WIO 401 B 1 HETATM 6 C C12 WIO . . . D 2 25.383 -3.083 14.28 1 36.96 ? C12 WIO 401 B 1 HETATM 7 C C14 WIO . . . D 2 23.942 -3.856 16.313 1 30.71 ? C14 WIO 401 B 1 HETATM 8 C C15 WIO . . . D 2 23.045 -2.851 17.074 1 34.75 ? C15 WIO 401 B 1 HETATM 9 C C16 WIO . . . D 2 23.429 -1.357 16.998 1 38.52 ? C16 WIO 401 B 1 HETATM 10 C C19 WIO . . . D 2 24.409 0.288 18.526 1 41.23 ? C19 WIO 401 B 1 HETATM 11 C C20 WIO . . . D 2 24.688 -1.028 17.799 1 42.16 ? C20 WIO 401 B 1 HETATM 12 O O21 WIO . . . D 2 21.17 -0.57 17.58 1 38.66 ? O21 WIO 401 B 1 HETATM 13 C C22 WIO . . . D 2 23.255 -5.242 16.5 1 35.75 ? C22 WIO 401 B 1 HETATM 14 O O23 WIO . . . D 2 23.929 -5.996 17.453 1 42.19 ? O23 WIO 401 B 1 HETATM 15 C C05 WIO . . . D 2 25.727 -0.059 13.192 1 28.9 ? C05 WIO 401 B 1 HETATM 16 C C03 WIO . . . D 2 26.042 2.405 13.357 1 37.23 ? C03 WIO 401 B 1 HETATM 17 C C02 WIO . . . D 2 26.448 3.215 12.012 1 39.69 ? C02 WIO 401 B 1 HETATM 18 C C01 WIO . . . D 2 27.974 3.346 12.175 1 50.43 ? C01 WIO 401 B 1 HETATM 19 C C17 WIO . . . D 2 22.374 -0.503 17.701 1 34.73 ? C17 WIO 401 B 1 HETATM 20 C C26 WIO . . . D 2 25.977 2.373 10.802 1 42.32 ? C26 WIO 401 B 1 HETATM 21 C C28 WIO . . . D 2 26.295 5.669 12.6 1 50.66 ? C28 WIO 401 B 1 HETATM 22 N N06 WIO . . . D 2 26.257 -1.286 12.79 1 30.59 ? N06 WIO 401 B 1 HETATM 23 N N13 WIO . . . D 2 24.164 -3.389 14.891 1 30.52 ? N13 WIO 401 B 1 HETATM 24 N N18 WIO . . . D 2 22.951 0.402 18.572 1 41.12 ? N18 WIO 401 B 1 HETATM 25 O O04 WIO . . . D 2 26.489 1.051 13.376 1 32.89 ? O04 WIO 401 B 1 HETATM 26 O O24 WIO . . . D 2 26.446 -3.249 14.889 1 38.14 ? O24 WIO 401 B 1 HETATM 27 O O25 WIO . . . D 2 24.536 0.065 13.425 1 42.2 ? O25 WIO 401 B 1 HETATM 28 O O27 WIO . . . D 2 25.856 4.54 11.838 1 45.74 ? O27 WIO 401 B 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #