data_8E6C # _model_server_result.job_id 2WTghSlV738TpLIEksGNdA _model_server_result.datetime_utc '2024-11-05 03:57:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e6c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8E6C # _exptl.entry_id 8E6C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 577.686 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[2-(3-fluorophenyl)sulfanyl-2-methyl-propyl] ~{N}-[(2~{S})-1-[[3-[(3~{S})-2-$l^{3}-oxidanylidenepyrrolidin-3-yl]-1-$l^{1}-oxidanylsulfonyl-1-oxidanyl-propan-2-yl]-$l^{2}-azanyl]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.42 _cell.angle_gamma 90 _cell.entry_id 8E6C _cell.length_a 100.96 _cell.length_b 57.4 _cell.length_c 49.75 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E6C _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -18.974306 0 45.989545 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 155 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 148 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C14 _struct_conn.ptnr2_label_comp_id UTU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id UTU _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.809 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H36 F N3 O8 S2' _chem_comp.formula_weight 577.686 _chem_comp.id UTU _chem_comp.mon_nstd_flag . _chem_comp.name '[2-(3-fluorophenyl)sulfanyl-2-methyl-propyl] ~{N}-[(2~{S})-1-[[3-[(3~{S})-2-$l^{3}-oxidanylidenepyrrolidin-3-yl]-1-$l^{1}-oxidanylsulfonyl-1-oxidanyl-propan-2-yl]-$l^{2}-azanyl]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C4 UTU sing 358 n n C20 C21 UTU doub 359 n y C20 C19 UTU sing 360 n y C4 C5 UTU sing 361 n n C4 C3 UTU sing 362 n n S1 C19 UTU sing 363 n n S1 C16 UTU sing 364 n n C21 C22 UTU sing 365 n y C19 C24 UTU doub 366 n y C22 C23 UTU doub 367 n y C24 C23 UTU sing 368 n y C23 F1 UTU sing 369 n n C3 C2 UTU sing 370 n n C18 C16 UTU sing 371 n n C16 C15 UTU sing 372 n n C16 C17 UTU sing 373 n n C15 O5 UTU sing 374 n n N1 C2 UTU sing 375 n n N1 C1 UTU sing 376 n n C2 C7 UTU sing 377 n n O5 C1 UTU sing 378 n n C1 O1 UTU doub 379 n n C7 O4 UTU doub 380 n n C7 N2 UTU sing 381 n n N2 C8 UTU sing 382 n n O3 C14 UTU sing 383 n n C8 C14 UTU sing 384 n n C8 C9 UTU sing 385 n n C9 C10 UTU sing 386 n n C10 C13 UTU sing 387 n n C10 C11 UTU sing 388 n n C13 C12 UTU sing 389 n n C12 N3 UTU sing 390 n n C11 O2 UTU doub 391 n n C11 N3 UTU sing 392 n n N1 H1 UTU sing 393 n n C2 H2 UTU sing 394 n n N3 H3 UTU sing 395 n n C4 H4 UTU sing 396 n n C5 H5 UTU sing 397 n n C10 H13 UTU sing 398 n n C12 H14 UTU sing 399 n n C12 H15 UTU sing 400 n n C13 H16 UTU sing 401 n n C13 H17 UTU sing 402 n n C14 H18 UTU sing 403 n n C15 H20 UTU sing 404 n n C15 H21 UTU sing 405 n n C17 H22 UTU sing 406 n n C17 H23 UTU sing 407 n n C17 H24 UTU sing 408 n n C18 H25 UTU sing 409 n n C18 H26 UTU sing 410 n n C18 H27 UTU sing 411 n n C20 H28 UTU sing 412 n n C21 H29 UTU sing 413 n n C22 H30 UTU sing 414 n n C24 H31 UTU sing 415 n n C3 H32 UTU sing 416 n n C3 H33 UTU sing 417 n n C9 H34 UTU sing 418 n n C9 H35 UTU sing 419 n n O3 H36 UTU sing 420 n n C14 S2 UTU sing 421 n n S2 O6 UTU doub 422 n n S2 O7 UTU doub 423 n n S2 O8 UTU sing 424 n n C5 H6 UTU sing 425 n n C5 H7 UTU sing 426 n n C6 H8 UTU sing 427 n n C6 H9 UTU sing 428 n n C6 H10 UTU sing 429 n n N2 H11 UTU sing 430 n n C8 H12 UTU sing 431 n n O8 H19 UTU sing 432 n n # _atom_sites.entry_id 8E6C _atom_sites.fract_transf_matrix[1][1] 0.009905 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004087 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017422 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021744 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UTU A 1 401 401 UTU C49 . C 3 HOH A 1 501 5 HOH HOH . C 3 HOH A 2 502 3 HOH HOH . C 3 HOH A 3 503 6 HOH HOH . C 3 HOH A 4 504 4 HOH HOH . C 3 HOH A 5 505 2 HOH HOH . C 3 HOH A 6 506 9 HOH HOH . C 3 HOH A 7 507 13 HOH HOH . C 3 HOH A 8 508 10 HOH HOH . C 3 HOH A 9 509 11 HOH HOH . C 3 HOH A 10 510 14 HOH HOH . C 3 HOH A 11 511 1 HOH HOH . C 3 HOH A 12 512 8 HOH HOH . C 3 HOH A 13 513 12 HOH HOH . C 3 HOH A 14 514 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UTU . . . B 2 -21.402 24.082 1.642 1 44.61 ? N1 UTU 401 A 1 HETATM 2 C C2 UTU . . . B 2 -21.126 25.501 1.804 1 43.49 ? C2 UTU 401 A 1 HETATM 3 O O2 UTU . . . B 2 -19.407 24.192 8.006 1 35.78 ? O2 UTU 401 A 1 HETATM 4 N N3 UTU . . . B 2 -21.461 23.177 8.024 1 40.82 ? N3 UTU 401 A 1 HETATM 5 C C4 UTU . . . B 2 -20.739 25.991 -0.7 1 52.87 ? C4 UTU 401 A 1 HETATM 6 C C5 UTU . . . B 2 -19.256 26.233 -0.466 1 51.1 ? C5 UTU 401 A 1 HETATM 7 C C6 UTU . . . B 2 -21.234 26.829 -1.869 1 47.48 ? C6 UTU 401 A 1 HETATM 8 N N2 UTU . . . B 2 -20.914 26.535 3.999 1 44.06 ? N2 UTU 401 A 1 HETATM 9 O O4 UTU . . . B 2 -22.984 26.139 3.185 1 50.34 ? O4 UTU 401 A 1 HETATM 10 C C7 UTU . . . B 2 -21.762 26.091 3.065 1 46.26 ? C7 UTU 401 A 1 HETATM 11 C C8 UTU . . . B 2 -21.323 27.137 5.269 1 48.66 ? C8 UTU 401 A 1 HETATM 12 C C1 UTU . . . B 2 -21.056 23.22 2.615 1 51.1 ? C1 UTU 401 A 1 HETATM 13 C C10 UTU . . . B 2 -21.237 24.92 6.528 1 40.73 ? C10 UTU 401 A 1 HETATM 14 C C11 UTU . . . B 2 -20.576 24.075 7.601 1 38.82 ? C11 UTU 401 A 1 HETATM 15 C C12 UTU . . . B 2 -22.766 23.31 7.386 1 40.58 ? C12 UTU 401 A 1 HETATM 16 C C13 UTU . . . B 2 -22.713 24.726 6.838 1 44.72 ? C13 UTU 401 A 1 HETATM 17 C C14 UTU . . . B 2 -20.894 28.591 5.319 1 43.36 ? C14 UTU 401 A 1 HETATM 18 C C15 UTU . . . B 2 -21.943 21.739 0.968 1 60.24 ? C15 UTU 401 A 1 HETATM 19 C C16 UTU . . . B 2 -21.874 20.246 0.794 1 62.56 ? C16 UTU 401 A 1 HETATM 20 C C17 UTU . . . B 2 -22.42 19.574 2.045 1 60.64 ? C17 UTU 401 A 1 HETATM 21 C C18 UTU . . . B 2 -20.411 19.886 0.584 1 56.87 ? C18 UTU 401 A 1 HETATM 22 C C19 UTU . . . B 2 -23.002 17.878 -0.515 1 74.85 ? C19 UTU 401 A 1 HETATM 23 C C20 UTU . . . B 2 -24.233 17.281 -0.768 1 67.05 ? C20 UTU 401 A 1 HETATM 24 C C21 UTU . . . B 2 -24.381 15.909 -0.654 1 65.17 ? C21 UTU 401 A 1 HETATM 25 C C22 UTU . . . B 2 -23.32 15.104 -0.294 1 70.67 ? C22 UTU 401 A 1 HETATM 26 C C23 UTU . . . B 2 -22.118 15.707 -0.052 1 76.53 ? C23 UTU 401 A 1 HETATM 27 C C24 UTU . . . B 2 -21.93 17.067 -0.16 1 79.01 ? C24 UTU 401 A 1 HETATM 28 C C3 UTU . . . B 2 -21.543 26.291 0.564 1 40.53 ? C3 UTU 401 A 1 HETATM 29 C C9 UTU . . . B 2 -20.729 26.358 6.441 1 36.49 ? C9 UTU 401 A 1 HETATM 30 F F1 UTU . . . B 2 -21.056 14.936 0.304 1 84.71 ? F1 UTU 401 A 1 HETATM 31 O O1 UTU . . . B 2 -20.597 23.541 3.687 1 56.06 ? O1 UTU 401 A 1 HETATM 32 O O3 UTU . . . B 2 -21.582 29.331 4.327 1 42.85 ? O3 UTU 401 A 1 HETATM 33 O O5 UTU . . . B 2 -21.249 21.951 2.225 1 53.93 ? O5 UTU 401 A 1 HETATM 34 S S1 UTU . . . B 2 -22.836 19.631 -0.672 1 89.83 ? S1 UTU 401 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #