data_8E7Q # _model_server_result.job_id ynlMW6lmvckXaanVKci5vA _model_server_result.datetime_utc '2024-11-27 20:09:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8e7q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 8E7Q # _exptl.entry_id 8E7Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.058 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-phosphonopropanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8E7Q _cell.length_a 64.314 _cell.length_b 68.016 _cell.length_c 69.802 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8E7Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 7 A HIS 7 1_555 G ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc2 A NE2 HIS 66 A HIS 66 1_555 E ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc3 A OE1 GLU 115 A GLU 115 1_555 E ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc4 C O3 UXR . A UXR 201 1_555 E ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? metalc ? metalc5 E ZN ZN . A ZN 203 1_555 B NE2 HIS 7 B HIS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc6 J O HOH . A HOH 305 2_455 H MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc7 J O HOH . A HOH 306 1_555 H MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc8 J O HOH . A HOH 313 3_544 I MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc9 J O HOH . A HOH 359 2_455 H MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc10 J O HOH . A HOH 407 3_544 I MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc11 B NE2 HIS 66 B HIS 66 1_555 G ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc12 B OE1 GLU 115 B GLU 115 1_555 G ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc13 F O5 UXR . B UXR 201 1_555 G ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc14 H MG MG . B MG 203 1_555 K O HOH . B HOH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc15 H MG MG . B MG 203 1_555 K O HOH . B HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc16 I MG MG . B MG 204 1_555 K O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc17 I MG MG . B MG 204 1_555 K O HOH . B HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc18 I MG MG . B MG 204 1_555 K O HOH . B HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc19 I MG MG . B MG 204 1_555 K O HOH . B HOH 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? # _chem_comp.formula 'C3 H7 O5 P' _chem_comp.formula_weight 154.058 _chem_comp.id UXR _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-phosphonopropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C3 UXR doub 362 n n C3 O2 UXR sing 363 n n C3 C2 UXR sing 364 n n C2 C1 UXR sing 365 n n C2 P1 UXR sing 366 n n P1 O5 UXR doub 367 n n P1 O4 UXR sing 368 n n P1 O3 UXR sing 369 n n C1 H1 UXR sing 370 n n C1 H2 UXR sing 371 n n C1 H3 UXR sing 372 n n C2 H4 UXR sing 373 n n O2 H5 UXR sing 374 n n O3 H6 UXR sing 375 n n O4 H7 UXR sing 376 n n # _atom_sites.entry_id 8E7Q _atom_sites.fract_transf_matrix[1][1] 0.015549 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014702 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014326 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UXR A 1 201 203 UXR PPP . D 3 FMT A 1 202 204 FMT FMT . E 4 ZN A 1 203 1 ZN ZN . F 2 UXR B 1 201 202 UXR PPP . G 4 ZN B 1 202 2 ZN ZN . H 5 MG B 1 203 2 MG MG . I 5 MG B 1 204 4 MG MG . J 6 HOH A 1 301 138 HOH HOH . J 6 HOH A 2 302 134 HOH HOH . J 6 HOH A 3 303 171 HOH HOH . J 6 HOH A 4 304 111 HOH HOH . J 6 HOH A 5 305 10 HOH HOH . J 6 HOH A 6 306 8 HOH HOH . J 6 HOH A 7 307 49 HOH HOH . J 6 HOH A 8 308 149 HOH HOH . J 6 HOH A 9 309 142 HOH HOH . J 6 HOH A 10 310 159 HOH HOH . J 6 HOH A 11 311 5 HOH HOH . J 6 HOH A 12 312 217 HOH HOH . J 6 HOH A 13 313 221 HOH HOH . J 6 HOH A 14 314 43 HOH HOH . J 6 HOH A 15 315 72 HOH HOH . J 6 HOH A 16 316 235 HOH HOH . J 6 HOH A 17 317 79 HOH HOH . J 6 HOH A 18 318 129 HOH HOH . J 6 HOH A 19 319 107 HOH HOH . J 6 HOH A 20 320 87 HOH HOH . J 6 HOH A 21 321 112 HOH HOH . J 6 HOH A 22 322 74 HOH HOH . J 6 HOH A 23 323 106 HOH HOH . J 6 HOH A 24 324 71 HOH HOH . J 6 HOH A 25 325 3 HOH HOH . J 6 HOH A 26 326 166 HOH HOH . J 6 HOH A 27 327 70 HOH HOH . J 6 HOH A 28 328 41 HOH HOH . J 6 HOH A 29 329 22 HOH HOH . J 6 HOH A 30 330 126 HOH HOH . J 6 HOH A 31 331 104 HOH HOH . J 6 HOH A 32 332 160 HOH HOH . J 6 HOH A 33 333 1 HOH HOH . J 6 HOH A 34 334 182 HOH HOH . J 6 HOH A 35 335 187 HOH HOH . J 6 HOH A 36 336 198 HOH HOH . J 6 HOH A 37 337 99 HOH HOH . J 6 HOH A 38 338 28 HOH HOH . J 6 HOH A 39 339 127 HOH HOH . J 6 HOH A 40 340 167 HOH HOH . J 6 HOH A 41 341 73 HOH HOH . J 6 HOH A 42 342 56 HOH HOH . J 6 HOH A 43 343 163 HOH HOH . J 6 HOH A 44 344 35 HOH HOH . J 6 HOH A 45 345 52 HOH HOH . J 6 HOH A 46 346 60 HOH HOH . J 6 HOH A 47 347 218 HOH HOH . J 6 HOH A 48 348 76 HOH HOH . J 6 HOH A 49 349 229 HOH HOH . J 6 HOH A 50 350 216 HOH HOH . J 6 HOH A 51 351 23 HOH HOH . J 6 HOH A 52 352 67 HOH HOH . J 6 HOH A 53 353 27 HOH HOH . J 6 HOH A 54 354 55 HOH HOH . J 6 HOH A 55 355 97 HOH HOH . J 6 HOH A 56 356 155 HOH HOH . J 6 HOH A 57 357 21 HOH HOH . J 6 HOH A 58 358 58 HOH HOH . J 6 HOH A 59 359 219 HOH HOH . J 6 HOH A 60 360 161 HOH HOH . J 6 HOH A 61 361 53 HOH HOH . J 6 HOH A 62 362 130 HOH HOH . J 6 HOH A 63 363 65 HOH HOH . J 6 HOH A 64 364 75 HOH HOH . J 6 HOH A 65 365 158 HOH HOH . J 6 HOH A 66 366 121 HOH HOH . J 6 HOH A 67 367 175 HOH HOH . J 6 HOH A 68 368 136 HOH HOH . J 6 HOH A 69 369 81 HOH HOH . J 6 HOH A 70 370 238 HOH HOH . J 6 HOH A 71 371 114 HOH HOH . J 6 HOH A 72 372 228 HOH HOH . J 6 HOH A 73 373 94 HOH HOH . J 6 HOH A 74 374 38 HOH HOH . J 6 HOH A 75 375 19 HOH HOH . J 6 HOH A 76 376 59 HOH HOH . J 6 HOH A 77 377 157 HOH HOH . J 6 HOH A 78 378 90 HOH HOH . J 6 HOH A 79 379 17 HOH HOH . J 6 HOH A 80 380 147 HOH HOH . J 6 HOH A 81 381 15 HOH HOH . J 6 HOH A 82 382 117 HOH HOH . J 6 HOH A 83 383 197 HOH HOH . J 6 HOH A 84 384 39 HOH HOH . J 6 HOH A 85 385 50 HOH HOH . J 6 HOH A 86 386 151 HOH HOH . J 6 HOH A 87 387 237 HOH HOH . J 6 HOH A 88 388 196 HOH HOH . J 6 HOH A 89 389 183 HOH HOH . J 6 HOH A 90 390 190 HOH HOH . J 6 HOH A 91 391 201 HOH HOH . J 6 HOH A 92 392 29 HOH HOH . J 6 HOH A 93 393 206 HOH HOH . J 6 HOH A 94 394 98 HOH HOH . J 6 HOH A 95 395 214 HOH HOH . J 6 HOH A 96 396 154 HOH HOH . J 6 HOH A 97 397 31 HOH HOH . J 6 HOH A 98 398 139 HOH HOH . J 6 HOH A 99 399 213 HOH HOH . J 6 HOH A 100 400 48 HOH HOH . J 6 HOH A 101 401 135 HOH HOH . J 6 HOH A 102 402 109 HOH HOH . J 6 HOH A 103 403 188 HOH HOH . J 6 HOH A 104 404 95 HOH HOH . J 6 HOH A 105 405 176 HOH HOH . J 6 HOH A 106 406 209 HOH HOH . J 6 HOH A 107 407 224 HOH HOH . J 6 HOH A 108 408 33 HOH HOH . K 6 HOH B 1 301 2 HOH HOH . K 6 HOH B 2 302 180 HOH HOH . K 6 HOH B 3 303 153 HOH HOH . K 6 HOH B 4 304 148 HOH HOH . K 6 HOH B 5 305 236 HOH HOH . K 6 HOH B 6 306 119 HOH HOH . K 6 HOH B 7 307 78 HOH HOH . K 6 HOH B 8 308 133 HOH HOH . K 6 HOH B 9 309 222 HOH HOH . K 6 HOH B 10 310 125 HOH HOH . K 6 HOH B 11 311 40 HOH HOH . K 6 HOH B 12 312 225 HOH HOH . K 6 HOH B 13 313 6 HOH HOH . K 6 HOH B 14 314 63 HOH HOH . K 6 HOH B 15 315 164 HOH HOH . K 6 HOH B 16 316 200 HOH HOH . K 6 HOH B 17 317 234 HOH HOH . K 6 HOH B 18 318 102 HOH HOH . K 6 HOH B 19 319 85 HOH HOH . K 6 HOH B 20 320 108 HOH HOH . K 6 HOH B 21 321 68 HOH HOH . K 6 HOH B 22 322 80 HOH HOH . K 6 HOH B 23 323 199 HOH HOH . K 6 HOH B 24 324 96 HOH HOH . K 6 HOH B 25 325 150 HOH HOH . K 6 HOH B 26 326 140 HOH HOH . K 6 HOH B 27 327 168 HOH HOH . K 6 HOH B 28 328 185 HOH HOH . K 6 HOH B 29 329 143 HOH HOH . K 6 HOH B 30 330 16 HOH HOH . K 6 HOH B 31 331 152 HOH HOH . K 6 HOH B 32 332 64 HOH HOH . K 6 HOH B 33 333 156 HOH HOH . K 6 HOH B 34 334 105 HOH HOH . K 6 HOH B 35 335 51 HOH HOH . K 6 HOH B 36 336 100 HOH HOH . K 6 HOH B 37 337 115 HOH HOH . K 6 HOH B 38 338 128 HOH HOH . K 6 HOH B 39 339 172 HOH HOH . K 6 HOH B 40 340 86 HOH HOH . K 6 HOH B 41 341 192 HOH HOH . K 6 HOH B 42 342 88 HOH HOH . K 6 HOH B 43 343 191 HOH HOH . K 6 HOH B 44 344 36 HOH HOH . K 6 HOH B 45 345 227 HOH HOH . K 6 HOH B 46 346 25 HOH HOH . K 6 HOH B 47 347 84 HOH HOH . K 6 HOH B 48 348 137 HOH HOH . K 6 HOH B 49 349 220 HOH HOH . K 6 HOH B 50 350 61 HOH HOH . K 6 HOH B 51 351 146 HOH HOH . K 6 HOH B 52 352 77 HOH HOH . K 6 HOH B 53 353 230 HOH HOH . K 6 HOH B 54 354 174 HOH HOH . K 6 HOH B 55 355 240 HOH HOH . K 6 HOH B 56 356 124 HOH HOH . K 6 HOH B 57 357 44 HOH HOH . K 6 HOH B 58 358 26 HOH HOH . K 6 HOH B 59 359 24 HOH HOH . K 6 HOH B 60 360 207 HOH HOH . K 6 HOH B 61 361 54 HOH HOH . K 6 HOH B 62 362 162 HOH HOH . K 6 HOH B 63 363 18 HOH HOH . K 6 HOH B 64 364 14 HOH HOH . K 6 HOH B 65 365 37 HOH HOH . K 6 HOH B 66 366 211 HOH HOH . K 6 HOH B 67 367 91 HOH HOH . K 6 HOH B 68 368 46 HOH HOH . K 6 HOH B 69 369 4 HOH HOH . K 6 HOH B 70 370 232 HOH HOH . K 6 HOH B 71 371 9 HOH HOH . K 6 HOH B 72 372 212 HOH HOH . K 6 HOH B 73 373 30 HOH HOH . K 6 HOH B 74 374 131 HOH HOH . K 6 HOH B 75 375 20 HOH HOH . K 6 HOH B 76 376 233 HOH HOH . K 6 HOH B 77 377 45 HOH HOH . K 6 HOH B 78 378 34 HOH HOH . K 6 HOH B 79 379 231 HOH HOH . K 6 HOH B 80 380 89 HOH HOH . K 6 HOH B 81 381 241 HOH HOH . K 6 HOH B 82 382 205 HOH HOH . K 6 HOH B 83 383 93 HOH HOH . K 6 HOH B 84 384 32 HOH HOH . K 6 HOH B 85 385 110 HOH HOH . K 6 HOH B 86 386 116 HOH HOH . K 6 HOH B 87 387 239 HOH HOH . K 6 HOH B 88 388 66 HOH HOH . K 6 HOH B 89 389 42 HOH HOH . K 6 HOH B 90 390 92 HOH HOH . K 6 HOH B 91 391 141 HOH HOH . K 6 HOH B 92 392 103 HOH HOH . K 6 HOH B 93 393 69 HOH HOH . K 6 HOH B 94 394 57 HOH HOH . K 6 HOH B 95 395 118 HOH HOH . K 6 HOH B 96 396 208 HOH HOH . K 6 HOH B 97 397 7 HOH HOH . K 6 HOH B 98 398 223 HOH HOH . K 6 HOH B 99 399 47 HOH HOH . K 6 HOH B 100 400 82 HOH HOH . K 6 HOH B 101 401 11 HOH HOH . K 6 HOH B 102 402 122 HOH HOH . K 6 HOH B 103 403 204 HOH HOH . K 6 HOH B 104 404 215 HOH HOH . K 6 HOH B 105 405 181 HOH HOH . K 6 HOH B 106 406 132 HOH HOH . K 6 HOH B 107 407 203 HOH HOH . K 6 HOH B 108 408 189 HOH HOH . K 6 HOH B 109 409 179 HOH HOH . K 6 HOH B 110 410 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 UXR . . . F 2 -6.159 26.082 8.381 1 25.35 0 C1 UXR 201 B 1 HETATM 2 C C2 UXR . . . F 2 -4.74 25.5 8.321 1 24.28 0 C2 UXR 201 B 1 HETATM 3 C C3 UXR . . . F 2 -3.797 26.331 7.438 1 26.13 0 C3 UXR 201 B 1 HETATM 4 O O1 UXR . . . F 2 -3.033 25.698 6.652 1 34.13 0 O1 UXR 201 B 1 HETATM 5 O O2 UXR . . . F 2 -3.836 27.566 7.574 1 27.56 0 O2 UXR 201 B 1 HETATM 6 P P1 UXR . . . F 2 -4.118 25.281 10.011 1 18.59 0 P1 UXR 201 B 1 HETATM 7 O O3 UXR . . . F 2 -5.063 25.918 11.015 1 19.84 0 O3 UXR 201 B 1 HETATM 8 O O4 UXR . . . F 2 -2.686 25.827 10.173 1 18.76 0 O4 UXR 201 B 1 HETATM 9 O O5 UXR . . . F 2 -4.136 23.791 10.143 1 18.85 0 O5 UXR 201 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #